Wall clock time and date at job start Mon Mar 8 2021 12:04:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.45202 * 109.46824 * 2 1 4 4 C 1.34228 * 116.99785 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00333 * 359.97438 * 4 3 2 6 6 C 1.50705 * 119.99755 * 179.97438 * 4 3 2 7 7 H 1.09003 * 112.84958 * 48.80681 * 6 4 3 8 8 C 1.53779 * 113.61156 * 179.97438 * 6 4 3 9 9 C 1.53780 * 87.07952 * 140.06743 * 8 6 4 10 10 F 1.39904 * 113.61391 * 89.19871 * 9 8 6 11 11 C 1.53006 * 113.61506 * 220.01671 * 9 8 6 12 12 S 1.81399 * 109.47136 * 180.02562 * 11 9 8 13 13 O 1.42101 * 110.54435 * 68.37334 * 12 11 9 14 14 O 1.42108 * 110.54375 * 291.62777 * 12 11 9 15 15 O 1.52194 * 104.45195 * 180.02562 * 12 11 9 16 16 C 1.35895 * 114.00158 * 74.99335 * 15 12 11 17 17 C 1.38709 * 120.05377 * 90.00517 * 16 15 12 18 18 N 1.48004 * 120.03000 * 0.04240 * 17 16 15 19 19 O 1.21801 * 120.00384 * 179.97438 * 18 17 16 20 20 O 1.21807 * 119.99619 * 359.97438 * 18 17 16 21 21 C 1.38165 * 119.94666 * 180.02562 * 17 16 15 22 22 C 1.38239 * 120.05713 * 359.97438 * 21 17 16 23 23 C 1.50694 * 119.94937 * 179.97438 * 22 21 17 24 24 O 1.42901 * 109.47118 * 64.99931 * 23 22 21 25 25 Si 1.86298 * 109.47775 * 185.00176 * 23 22 21 26 26 C 1.38287 * 120.11249 * 0.27543 * 22 21 17 27 27 C 1.38131 * 120.05066 * 359.45250 * 26 22 21 28 28 C 1.53774 * 87.08225 * 334.56615 * 9 8 6 29 29 H 1.08990 * 109.47161 * 300.00216 * 1 2 3 30 30 H 1.09005 * 109.46987 * 60.00488 * 1 2 3 31 31 H 1.09002 * 109.46966 * 179.97438 * 1 2 3 32 32 H 1.08998 * 109.47117 * 240.00167 * 2 1 3 33 33 H 1.08997 * 109.47233 * 119.99663 * 2 1 3 34 34 H 1.08999 * 113.61722 * 25.51632 * 8 6 4 35 35 H 1.09006 * 113.69109 * 254.62432 * 8 6 4 36 36 H 1.09004 * 109.46604 * 60.00266 * 11 9 8 37 37 H 1.09000 * 109.46810 * 300.00070 * 11 9 8 38 38 H 1.08001 * 119.97233 * 179.97438 * 21 17 16 39 39 H 1.09004 * 109.47407 * 305.00288 * 23 22 21 40 40 H 0.96708 * 114.00246 * 180.02562 * 24 23 22 41 41 H 1.48506 * 109.99834 * 300.00486 * 25 23 22 42 42 H 1.48502 * 110.00011 * 61.31751 * 25 23 22 43 43 H 1.08002 * 119.97804 * 179.70142 * 26 22 21 44 44 H 1.08003 * 120.02959 * 180.29505 * 27 26 22 45 45 H 1.09005 * 113.61517 * 139.97724 * 28 9 8 46 46 H 1.08997 * 113.61752 * 270.88534 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5868 0.0015 6 6 3.9206 2.9375 0.0000 7 1 3.4707 3.5820 0.7553 8 6 5.4581 2.9682 0.0013 9 6 5.3572 4.1433 -0.9855 10 9 5.2852 5.3939 -0.3623 11 6 6.4003 4.0960 -2.1038 12 16 6.1808 5.5271 -3.1965 13 8 6.5258 6.7284 -2.5204 14 8 4.9637 5.4185 -3.9220 15 8 7.2632 5.3670 -4.2543 16 6 6.9979 4.4034 -5.1752 17 6 6.3085 4.7226 -6.3357 18 7 5.8616 6.1135 -6.5730 19 8 5.2567 6.3933 -7.5925 20 8 6.0989 6.9784 -5.7487 21 6 6.0395 3.7412 -7.2702 22 6 6.4574 2.4420 -7.0497 23 6 6.1622 1.3733 -8.0704 24 8 6.8624 1.6649 -9.2815 25 14 6.7158 -0.2807 -7.4158 26 6 7.1403 2.1201 -5.8912 27 6 7.4166 3.0988 -4.9564 28 6 3.9874 3.5781 -1.3965 29 1 -0.3633 0.5138 0.8899 30 1 -0.3633 0.5138 -0.8901 31 1 -0.3633 -1.0277 -0.0005 32 1 1.8934 -0.5138 -0.8900 33 1 1.8934 -0.5138 0.8900 34 1 5.9131 2.0755 -0.4278 35 1 5.8899 3.2423 0.9640 36 1 6.2762 3.1776 -2.6777 37 1 7.3998 4.1208 -1.6695 38 1 5.5024 3.9891 -8.1738 39 1 5.0906 1.3456 -8.2680 40 1 6.7182 1.0171 -9.9849 41 1 8.1753 -0.2560 -7.1423 42 1 5.9719 -0.6101 -6.1735 43 1 7.4615 1.1034 -5.7189 44 1 7.9542 2.8479 -4.0540 45 1 3.2304 4.3448 -1.5618 46 1 4.0402 2.8521 -2.2077 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_80028_16464788.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:04:52 Heat of formation + Delta-G solvation = -188.070051 kcal Electronic energy + Delta-G solvation = -40704.894881 eV Core-core repulsion = 34995.699958 eV Total energy + Delta-G solvation = -5709.194922 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.095 amu Computer time = 2.94 seconds Orbital eigenvalues (eV) -49.32669 -43.67696 -42.30441 -41.92930 -40.50929 -39.53525 -38.50930 -37.92744 -37.58295 -37.54927 -37.34314 -33.84396 -33.19353 -32.92275 -32.15885 -28.03140 -27.62393 -27.55125 -27.12529 -24.71501 -24.09211 -23.77870 -22.56404 -22.09418 -21.07447 -20.35136 -19.98611 -19.66516 -19.29834 -19.23532 -18.93244 -18.71598 -18.42017 -17.93302 -17.75661 -17.69082 -17.50905 -17.04460 -16.77787 -16.42626 -16.25477 -15.97559 -15.77547 -15.52605 -15.17886 -14.93972 -14.84261 -14.81006 -14.62258 -14.42445 -14.40500 -13.93936 -13.90266 -13.87065 -13.43659 -13.39806 -13.31343 -13.25472 -13.11788 -13.09212 -12.99173 -12.71272 -12.63798 -12.61962 -12.39308 -12.23784 -12.11135 -12.08861 -11.70550 -11.66438 -11.52851 -11.30406 -10.98226 -10.66936 -5.38353 -1.85715 -1.31289 -0.83503 -0.00107 0.08212 0.52930 0.79105 0.92824 1.22608 1.41491 1.42838 1.48634 2.16721 2.34546 2.43465 2.49442 2.53642 2.56135 2.68687 2.86638 2.94004 2.95354 3.03552 3.12217 3.34600 3.36219 3.56936 3.66392 3.74901 3.76714 3.82922 3.86720 3.95755 3.97691 4.01798 4.07911 4.12749 4.16131 4.16732 4.32615 4.38071 4.45026 4.59352 4.60092 4.69474 4.76039 4.91552 5.21680 5.28949 6.18329 6.53382 6.53895 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.061 3.939 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.503 6.503 6 C -0.109 4.109 7 H 0.140 0.860 8 C -0.121 4.121 9 C 0.103 3.897 10 F -0.168 7.168 11 C -0.681 4.681 12 S 2.597 3.403 13 O -0.880 6.880 14 O -0.937 6.937 15 O -0.648 6.648 16 C 0.138 3.862 17 C -0.020 4.020 18 N 0.033 4.967 19 O -0.125 6.125 20 O -0.152 6.152 21 C -0.008 4.008 22 C -0.055 4.055 23 C -0.080 4.080 24 O -0.542 6.542 25 Si 0.692 3.308 26 C -0.057 4.057 27 C -0.128 4.128 28 C -0.145 4.145 29 H 0.069 0.931 30 H 0.068 0.932 31 H 0.082 0.918 32 H 0.071 0.929 33 H 0.072 0.928 34 H 0.121 0.879 35 H 0.104 0.896 36 H 0.153 0.847 37 H 0.162 0.838 38 H 0.177 0.823 39 H 0.091 0.909 40 H 0.392 0.608 41 H -0.243 1.243 42 H -0.247 1.247 43 H 0.155 0.845 44 H 0.171 0.829 45 H 0.112 0.888 46 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.150 -12.409 -2.251 12.664 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.013 4.013 3 O -0.269 6.269 4 C 0.318 3.682 5 O -0.391 6.391 6 C -0.128 4.128 7 H 0.158 0.842 8 C -0.159 4.159 9 C 0.084 3.916 10 F -0.148 7.148 11 C -0.805 4.805 12 S 2.689 3.311 13 O -0.878 6.878 14 O -0.935 6.935 15 O -0.605 6.605 16 C 0.095 3.905 17 C -0.105 4.105 18 N 0.557 4.443 19 O -0.347 6.347 20 O -0.366 6.366 21 C -0.027 4.027 22 C -0.057 4.057 23 C -0.190 4.190 24 O -0.349 6.349 25 Si 0.591 3.409 26 C -0.075 4.075 27 C -0.148 4.148 28 C -0.182 4.182 29 H 0.088 0.912 30 H 0.087 0.913 31 H 0.101 0.899 32 H 0.089 0.911 33 H 0.091 0.909 34 H 0.139 0.861 35 H 0.123 0.877 36 H 0.171 0.829 37 H 0.180 0.820 38 H 0.194 0.806 39 H 0.109 0.891 40 H 0.241 0.759 41 H -0.167 1.167 42 H -0.171 1.171 43 H 0.172 0.828 44 H 0.188 0.812 45 H 0.131 0.869 46 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -0.225 -12.549 -1.291 12.617 hybrid contribution 0.037 0.406 0.572 0.703 sum -0.188 -12.143 -0.719 12.166 Atomic orbital electron populations 1.21833 0.92116 1.03377 1.03840 1.23136 0.95811 0.79537 1.02803 1.86528 1.23938 1.33027 1.83417 1.23192 0.80939 0.91755 0.72273 1.90684 1.60558 1.42721 1.45143 1.22477 0.97143 0.92191 1.00985 0.84204 1.23592 0.93882 0.97506 1.00903 1.21155 0.95247 0.82442 0.92791 1.93035 1.96979 1.41331 1.83414 1.31470 1.10209 1.24665 1.14186 1.05717 0.73679 0.76593 0.75089 1.93710 1.81429 1.39057 1.73628 1.93659 1.45464 1.86831 1.67544 1.85897 1.67883 1.58439 1.48266 1.17665 0.98272 0.86564 0.88042 1.21355 1.06083 0.84840 0.98176 1.43123 0.98871 1.01891 1.00412 1.94568 1.37617 1.86396 1.16158 1.94573 1.59825 1.41380 1.40826 1.21017 0.94218 0.89811 0.97654 1.19601 0.97233 0.93747 0.95078 1.24762 1.00678 1.05032 0.88566 1.86485 1.71377 1.54261 1.22812 0.94340 0.81176 0.80556 0.84823 1.21291 0.93897 0.99944 0.92348 1.21422 1.01160 0.89189 1.03037 1.23783 0.96111 1.01813 0.96522 0.91227 0.91267 0.89883 0.91058 0.90927 0.86097 0.87734 0.82932 0.82006 0.80603 0.89083 0.75864 1.16737 1.17123 0.82809 0.81168 0.86945 0.86837 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 27. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.36 10.29 37.16 0.38 0.75 16 2 C 0.06 -0.04 6.19 37.16 0.23 0.19 16 3 O -0.35 -0.26 10.22 -39.25 -0.40 -0.66 16 4 C 0.48 0.34 7.49 36.01 0.27 0.61 16 5 O -0.50 -1.45 15.65 -18.75 -0.29 -1.74 16 6 C -0.11 0.15 4.24 -90.96 -0.39 -0.24 16 7 H 0.14 -0.37 8.14 -51.93 -0.42 -0.79 16 8 C -0.12 0.25 6.86 -25.92 -0.18 0.07 16 9 C 0.10 -0.08 1.62 -89.81 -0.15 -0.22 16 10 F -0.17 -0.33 16.28 2.25 0.04 -0.29 16 11 C -0.68 1.46 5.18 37.16 0.19 1.65 16 12 S 2.60 8.13 4.11 -107.50 -0.44 7.69 16 13 O -0.88 -6.09 17.54 -67.03 -1.18 -7.27 16 14 O -0.94 -4.41 14.89 -69.90 -1.04 -5.45 16 15 O -0.65 -1.85 8.53 -54.88 -0.47 -2.31 16 16 C 0.14 0.20 4.78 -39.22 -0.19 0.01 16 17 C -0.02 -0.06 6.10 -79.81 -0.49 -0.54 16 18 N 0.03 0.21 4.20 34.03 0.14 0.35 16 19 O -0.12 -0.76 18.45 -29.46 -0.54 -1.30 16 20 O -0.15 -1.26 15.40 -39.17 -0.60 -1.86 16 21 C -0.01 0.00 9.19 -39.61 -0.36 -0.36 16 22 C -0.05 0.11 5.39 -104.61 -0.56 -0.46 16 23 C -0.08 0.35 2.79 36.00 0.10 0.45 16 24 O -0.54 2.01 12.81 -35.23 -0.45 1.56 16 25 Si 0.69 -3.75 29.84 -169.99 -5.07 -8.82 16 26 C -0.06 0.17 8.66 -39.60 -0.34 -0.18 16 27 C -0.13 0.33 8.46 -39.43 -0.33 0.00 16 28 C -0.14 0.21 7.08 -25.92 -0.18 0.02 16 29 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 30 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 31 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 32 H 0.07 -0.07 8.13 -51.93 -0.42 -0.50 16 33 H 0.07 -0.06 8.13 -51.93 -0.42 -0.48 16 34 H 0.12 -0.33 7.39 -51.93 -0.38 -0.72 16 35 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 36 H 0.15 -0.84 6.40 -51.92 -0.33 -1.18 16 37 H 0.16 -0.80 8.14 -51.92 -0.42 -1.22 16 38 H 0.18 -0.23 7.61 -52.49 -0.40 -0.63 16 39 H 0.09 -0.57 7.96 -51.93 -0.41 -0.99 16 40 H 0.39 -3.34 8.74 45.56 0.40 -2.94 16 41 H -0.24 0.68 7.05 56.52 0.40 1.08 16 42 H -0.25 0.86 7.11 56.52 0.40 1.26 16 43 H 0.15 -0.75 4.86 -52.49 -0.26 -1.01 16 44 H 0.17 -1.13 7.50 -52.48 -0.39 -1.52 16 45 H 0.11 -0.17 8.14 -51.93 -0.42 -0.60 16 46 H 0.11 -0.33 7.92 -51.93 -0.41 -0.74 16 LS Contribution 408.03 15.07 6.15 6.15 Total: 0.00 -14.41 408.03 -11.35 -25.77 By element: Atomic # 1 Polarization: -8.36 SS G_CDS: -5.20 Total: -13.55 kcal Atomic # 6 Polarization: 3.75 SS G_CDS: -2.00 Total: 1.75 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: 0.14 Total: 0.35 kcal Atomic # 8 Polarization: -14.06 SS G_CDS: -4.98 Total: -19.03 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -3.75 SS G_CDS: -5.07 Total: -8.82 kcal Atomic # 16 Polarization: 8.13 SS G_CDS: -0.44 Total: 7.69 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -14.41 -11.35 -25.77 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_80028_16464788.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -162.304 kcal (2) G-P(sol) polarization free energy of solvation -14.412 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.717 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.353 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.766 kcal (6) G-S(sol) free energy of system = (1) + (5) -188.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.94 seconds