Wall clock time and date at job start Mon Mar 8 2021 12:04:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.45202 * 109.46824 * 2 1 4 4 C 1.34228 * 116.99785 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00333 * 359.97438 * 4 3 2 6 6 C 1.50705 * 119.99755 * 179.97438 * 4 3 2 7 7 H 1.09003 * 112.84958 * 48.80681 * 6 4 3 8 8 C 1.53779 * 113.61156 * 179.97438 * 6 4 3 9 9 C 1.53780 * 87.07952 * 140.06743 * 8 6 4 10 10 F 1.39904 * 113.61391 * 89.19871 * 9 8 6 11 11 C 1.53006 * 113.61506 * 220.01671 * 9 8 6 12 12 S 1.81399 * 109.47136 * 180.02562 * 11 9 8 13 13 O 1.42101 * 110.54435 * 68.37334 * 12 11 9 14 14 O 1.42108 * 110.54375 * 291.62777 * 12 11 9 15 15 O 1.52194 * 104.45195 * 180.02562 * 12 11 9 16 16 C 1.35895 * 114.00158 * 74.99335 * 15 12 11 17 17 C 1.38709 * 120.05377 * 90.00517 * 16 15 12 18 18 N 1.48004 * 120.03000 * 0.04240 * 17 16 15 19 19 O 1.21801 * 120.00384 * 179.97438 * 18 17 16 20 20 O 1.21807 * 119.99619 * 359.97438 * 18 17 16 21 21 C 1.38165 * 119.94666 * 180.02562 * 17 16 15 22 22 C 1.38239 * 120.05713 * 359.97438 * 21 17 16 23 23 C 1.50694 * 119.94937 * 179.97438 * 22 21 17 24 24 O 1.42901 * 109.47118 * 64.99931 * 23 22 21 25 25 Si 1.86298 * 109.47775 * 185.00176 * 23 22 21 26 26 C 1.38287 * 120.11249 * 0.27543 * 22 21 17 27 27 C 1.38131 * 120.05066 * 359.45250 * 26 22 21 28 28 C 1.53774 * 87.08225 * 334.56615 * 9 8 6 29 29 H 1.08990 * 109.47161 * 300.00216 * 1 2 3 30 30 H 1.09005 * 109.46987 * 60.00488 * 1 2 3 31 31 H 1.09002 * 109.46966 * 179.97438 * 1 2 3 32 32 H 1.08998 * 109.47117 * 240.00167 * 2 1 3 33 33 H 1.08997 * 109.47233 * 119.99663 * 2 1 3 34 34 H 1.08999 * 113.61722 * 25.51632 * 8 6 4 35 35 H 1.09006 * 113.69109 * 254.62432 * 8 6 4 36 36 H 1.09004 * 109.46604 * 60.00266 * 11 9 8 37 37 H 1.09000 * 109.46810 * 300.00070 * 11 9 8 38 38 H 1.08001 * 119.97233 * 179.97438 * 21 17 16 39 39 H 1.09004 * 109.47407 * 305.00288 * 23 22 21 40 40 H 0.96708 * 114.00246 * 180.02562 * 24 23 22 41 41 H 1.48506 * 109.99834 * 300.00486 * 25 23 22 42 42 H 1.48502 * 110.00011 * 61.31751 * 25 23 22 43 43 H 1.08002 * 119.97804 * 179.70142 * 26 22 21 44 44 H 1.08003 * 120.02959 * 180.29505 * 27 26 22 45 45 H 1.09005 * 113.61517 * 139.97724 * 28 9 8 46 46 H 1.08997 * 113.61752 * 270.88534 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5868 0.0015 6 6 3.9206 2.9375 0.0000 7 1 3.4707 3.5820 0.7553 8 6 5.4581 2.9682 0.0013 9 6 5.3572 4.1433 -0.9855 10 9 5.2852 5.3939 -0.3623 11 6 6.4003 4.0960 -2.1038 12 16 6.1808 5.5271 -3.1965 13 8 6.5258 6.7284 -2.5204 14 8 4.9637 5.4185 -3.9220 15 8 7.2632 5.3670 -4.2543 16 6 6.9979 4.4034 -5.1752 17 6 6.3085 4.7226 -6.3357 18 7 5.8616 6.1135 -6.5730 19 8 5.2567 6.3933 -7.5925 20 8 6.0989 6.9784 -5.7487 21 6 6.0395 3.7412 -7.2702 22 6 6.4574 2.4420 -7.0497 23 6 6.1622 1.3733 -8.0704 24 8 6.8624 1.6649 -9.2815 25 14 6.7158 -0.2807 -7.4158 26 6 7.1403 2.1201 -5.8912 27 6 7.4166 3.0988 -4.9564 28 6 3.9874 3.5781 -1.3965 29 1 -0.3633 0.5138 0.8899 30 1 -0.3633 0.5138 -0.8901 31 1 -0.3633 -1.0277 -0.0005 32 1 1.8934 -0.5138 -0.8900 33 1 1.8934 -0.5138 0.8900 34 1 5.9131 2.0755 -0.4278 35 1 5.8899 3.2423 0.9640 36 1 6.2762 3.1776 -2.6777 37 1 7.3998 4.1208 -1.6695 38 1 5.5024 3.9891 -8.1738 39 1 5.0906 1.3456 -8.2680 40 1 6.7182 1.0171 -9.9849 41 1 8.1753 -0.2560 -7.1423 42 1 5.9719 -0.6101 -6.1735 43 1 7.4615 1.1034 -5.7189 44 1 7.9542 2.8479 -4.0540 45 1 3.2304 4.3448 -1.5618 46 1 4.0402 2.8521 -2.2077 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_80028_16464788.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:04:50 Heat of formation + Delta-G solvation = -192.242227 kcal Electronic energy + Delta-G solvation = -40705.075800 eV Core-core repulsion = 34995.699958 eV Total energy + Delta-G solvation = -5709.375842 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.095 amu Computer time = 1.70 seconds Orbital eigenvalues (eV) -49.33809 -43.88982 -42.47955 -41.91761 -40.42622 -39.44824 -38.73992 -37.97600 -37.63763 -37.60907 -37.53637 -33.83705 -33.05865 -32.79749 -32.05275 -28.24288 -27.43686 -27.38456 -27.03888 -24.64622 -24.03617 -23.76493 -22.58170 -22.12234 -20.97183 -20.48606 -20.24770 -19.77436 -19.38743 -19.32267 -18.88190 -18.72120 -18.45392 -17.90213 -17.71631 -17.62948 -17.41162 -16.94093 -16.71761 -16.38273 -16.25399 -15.89406 -15.53961 -15.45228 -15.07878 -14.86660 -14.74368 -14.72449 -14.51831 -14.31080 -14.21899 -13.95676 -13.76902 -13.72567 -13.68017 -13.58923 -13.26464 -13.16544 -13.08327 -13.04753 -13.00089 -12.79526 -12.60711 -12.59363 -12.53503 -12.47563 -12.03490 -11.99560 -11.62056 -11.60059 -11.52079 -11.23410 -10.80567 -10.33916 -4.90359 -1.98118 -1.40629 -0.76462 -0.22194 -0.10274 0.47126 0.92663 1.21235 1.48980 1.50171 1.71030 1.89828 2.13252 2.37285 2.54208 2.57093 2.62489 2.73103 2.82971 2.98669 3.08208 3.12109 3.15824 3.27984 3.52800 3.67331 3.76308 3.81869 3.93980 3.94857 3.98097 3.99640 4.13576 4.19003 4.23108 4.25975 4.29001 4.33537 4.33661 4.46556 4.53426 4.68053 4.71844 4.77998 4.86169 4.92650 4.93097 5.09260 5.36068 6.06753 6.54145 6.82805 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.054 3.946 3 O -0.362 6.362 4 C 0.478 3.522 5 O -0.526 6.526 6 C -0.110 4.110 7 H 0.147 0.853 8 C -0.109 4.109 9 C 0.089 3.911 10 F -0.188 7.188 11 C -0.654 4.654 12 S 2.582 3.418 13 O -0.941 6.941 14 O -0.967 6.967 15 O -0.657 6.657 16 C 0.113 3.887 17 C -0.048 4.048 18 N 0.034 4.966 19 O -0.125 6.125 20 O -0.215 6.215 21 C -0.012 4.012 22 C -0.056 4.056 23 C -0.093 4.093 24 O -0.563 6.563 25 Si 0.770 3.230 26 C -0.048 4.048 27 C -0.110 4.110 28 C -0.151 4.151 29 H 0.066 0.934 30 H 0.067 0.933 31 H 0.098 0.902 32 H 0.074 0.926 33 H 0.071 0.929 34 H 0.137 0.863 35 H 0.114 0.886 36 H 0.195 0.805 37 H 0.199 0.801 38 H 0.181 0.819 39 H 0.112 0.888 40 H 0.412 0.588 41 H -0.275 1.275 42 H -0.266 1.266 43 H 0.182 0.818 44 H 0.218 0.782 45 H 0.105 0.895 46 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.443 -16.550 -2.150 16.695 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.019 4.019 3 O -0.278 6.278 4 C 0.322 3.678 5 O -0.415 6.415 6 C -0.129 4.129 7 H 0.165 0.835 8 C -0.147 4.147 9 C 0.069 3.931 10 F -0.169 7.169 11 C -0.783 4.783 12 S 2.681 3.319 13 O -0.939 6.939 14 O -0.966 6.966 15 O -0.615 6.615 16 C 0.069 3.931 17 C -0.134 4.134 18 N 0.550 4.450 19 O -0.352 6.352 20 O -0.417 6.417 21 C -0.030 4.030 22 C -0.058 4.058 23 C -0.201 4.201 24 O -0.375 6.375 25 Si 0.671 3.329 26 C -0.065 4.065 27 C -0.130 4.130 28 C -0.188 4.188 29 H 0.085 0.915 30 H 0.086 0.914 31 H 0.116 0.884 32 H 0.093 0.907 33 H 0.089 0.911 34 H 0.155 0.845 35 H 0.132 0.868 36 H 0.213 0.787 37 H 0.216 0.784 38 H 0.198 0.802 39 H 0.130 0.870 40 H 0.264 0.736 41 H -0.201 1.201 42 H -0.192 1.192 43 H 0.199 0.801 44 H 0.235 0.765 45 H 0.123 0.877 46 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 0.474 -16.575 -1.180 16.624 hybrid contribution -0.208 1.442 0.425 1.518 sum 0.266 -15.133 -0.754 15.154 Atomic orbital electron populations 1.21845 0.91034 1.04312 1.03631 1.23301 0.96736 0.78997 1.02885 1.86539 1.24164 1.33895 1.83237 1.23510 0.80712 0.92153 0.71397 1.90665 1.60904 1.43564 1.46367 1.22570 0.97913 0.91159 1.01284 0.83481 1.23627 0.93196 0.96957 1.00966 1.21461 0.95999 0.82094 0.93564 1.93001 1.97105 1.42890 1.83875 1.31341 1.12073 1.22441 1.12445 1.05820 0.73103 0.77669 0.75295 1.93632 1.82106 1.43531 1.74599 1.93605 1.46752 1.87624 1.68586 1.85848 1.67252 1.59665 1.48733 1.18158 0.99527 0.87786 0.87589 1.21673 1.08541 0.82740 1.00422 1.43620 0.98202 1.03396 0.99745 1.94501 1.37273 1.87309 1.16150 1.94569 1.62211 1.43341 1.41568 1.21231 0.94356 0.90172 0.97291 1.20083 0.96223 0.93301 0.96199 1.25086 1.02135 1.04755 0.88155 1.86440 1.71673 1.55711 1.23647 0.93203 0.77983 0.78464 0.83250 1.21722 0.92288 1.01049 0.91474 1.21993 0.99530 0.86931 1.04531 1.23918 0.95765 1.02025 0.97130 0.91507 0.91364 0.88382 0.90745 0.91084 0.84529 0.86782 0.78746 0.78370 0.80175 0.87018 0.73556 1.20113 1.19158 0.80127 0.76481 0.87660 0.85057 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.79 10.29 71.98 0.74 1.53 16 2 C 0.05 -0.10 6.19 71.98 0.45 0.34 16 3 O -0.36 -0.40 10.22 -51.40 -0.53 -0.93 16 4 C 0.48 0.24 7.49 71.24 0.53 0.77 16 5 O -0.53 -2.31 15.65 21.98 0.34 -1.96 16 6 C -0.11 0.41 4.24 -11.01 -0.05 0.36 16 7 H 0.15 -0.81 8.14 -2.39 -0.02 -0.83 16 8 C -0.11 0.69 6.86 31.12 0.21 0.90 16 9 C 0.09 -0.22 1.62 -10.27 -0.02 -0.23 16 10 F -0.19 -0.91 16.28 44.97 0.73 -0.18 16 11 C -0.65 4.03 5.18 71.98 0.37 4.40 16 12 S 2.58 20.58 4.11 -56.49 -0.23 20.34 16 13 O -0.94 -16.39 17.54 -118.57 -2.08 -18.47 16 14 O -0.97 -11.70 14.89 -115.83 -1.72 -13.43 16 15 O -0.66 -4.78 8.53 -58.45 -0.50 -5.28 16 16 C 0.11 0.35 4.78 22.51 0.11 0.46 16 17 C -0.05 -0.36 6.10 36.47 0.22 -0.13 16 18 N 0.03 0.54 4.20 -46.25 -0.19 0.34 16 19 O -0.12 -1.91 18.45 18.89 0.35 -1.56 16 20 O -0.22 -4.61 15.40 28.16 0.43 -4.17 16 21 C -0.01 0.00 9.19 22.25 0.20 0.20 16 22 C -0.06 0.31 5.39 -19.85 -0.11 0.20 16 23 C -0.09 1.02 2.79 71.23 0.20 1.22 16 24 O -0.56 5.11 12.81 -148.98 -1.91 3.20 16 25 Si 0.77 -10.52 29.84 68.60 2.05 -8.48 16 26 C -0.05 0.42 8.66 22.26 0.19 0.61 16 27 C -0.11 0.86 8.46 22.37 0.19 1.05 16 28 C -0.15 0.52 7.08 31.12 0.22 0.74 16 29 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 30 H 0.07 -0.33 8.14 -2.38 -0.02 -0.35 16 31 H 0.10 -0.81 8.14 -2.39 -0.02 -0.83 16 32 H 0.07 -0.20 8.13 -2.39 -0.02 -0.22 16 33 H 0.07 -0.13 8.13 -2.39 -0.02 -0.15 16 34 H 0.14 -1.25 7.39 -2.39 -0.02 -1.26 16 35 H 0.11 -0.89 8.14 -2.38 -0.02 -0.91 16 36 H 0.20 -2.93 6.40 -2.39 -0.02 -2.94 16 37 H 0.20 -2.62 8.14 -2.39 -0.02 -2.64 16 38 H 0.18 -0.30 7.61 -2.91 -0.02 -0.32 16 39 H 0.11 -1.68 7.96 -2.38 -0.02 -1.70 16 40 H 0.41 -7.79 8.74 -74.05 -0.65 -8.43 16 41 H -0.27 2.26 7.05 99.48 0.70 2.96 16 42 H -0.27 2.72 7.11 99.48 0.71 3.43 16 43 H 0.18 -2.53 4.86 -2.91 -0.01 -2.54 16 44 H 0.22 -3.96 7.50 -2.91 -0.02 -3.98 16 45 H 0.10 -0.22 8.14 -2.38 -0.02 -0.24 16 46 H 0.13 -0.98 7.92 -2.39 -0.02 -1.00 16 Total: 0.00 -41.10 408.03 0.67 -40.43 By element: Atomic # 1 Polarization: -22.74 SS G_CDS: 0.46 Total: -22.28 kcal Atomic # 6 Polarization: 8.95 SS G_CDS: 3.47 Total: 12.42 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: -0.19 Total: 0.34 kcal Atomic # 8 Polarization: -36.99 SS G_CDS: -5.61 Total: -42.60 kcal Atomic # 9 Polarization: -0.91 SS G_CDS: 0.73 Total: -0.18 kcal Atomic # 14 Polarization: -10.52 SS G_CDS: 2.05 Total: -8.48 kcal Atomic # 16 Polarization: 20.58 SS G_CDS: -0.23 Total: 20.34 kcal Total: -41.10 0.67 -40.43 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_80028_16464788.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -151.816 kcal (2) G-P(sol) polarization free energy of solvation -41.097 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -192.913 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.671 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.426 kcal (6) G-S(sol) free energy of system = (1) + (5) -192.242 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.70 seconds