Wall clock time and date at job start Mon Mar 8 2021 13:17:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86305 * 109.46931 * 2 1 4 4 C 1.50693 * 109.47664 * 239.99561 * 2 1 3 5 5 C 1.38692 * 120.02246 * 261.47926 * 4 2 1 6 6 O 1.35922 * 120.04365 * 359.97438 * 5 4 2 7 7 S 1.52196 * 114.00153 * 261.27283 * 6 5 4 8 8 O 1.42097 * 104.28015 * 318.03416 * 7 6 5 9 9 O 1.42101 * 104.28000 * 190.17524 * 7 6 5 10 10 C 1.81401 * 104.44691 * 74.10565 * 7 6 5 11 11 H 1.08999 * 112.84759 * 311.19345 * 10 7 6 12 12 C 1.54053 * 113.62192 * 82.50661 * 10 7 6 13 13 C 1.53784 * 86.98588 * 139.97999 * 12 10 7 14 14 H 1.09001 * 113.61292 * 219.98226 * 13 12 10 15 15 O 1.42896 * 113.61607 * 89.15955 * 13 12 10 16 16 C 1.42907 * 113.99763 * 110.86358 * 15 13 12 17 17 C 1.50702 * 109.46725 * 179.97438 * 16 15 13 18 18 C 1.38237 * 119.99916 * 269.72228 * 17 16 15 19 19 C 1.38233 * 119.99527 * 179.79098 * 18 17 16 20 20 C 1.38232 * 120.00266 * 0.46739 * 19 18 17 21 21 C 1.38237 * 120.00206 * 359.76498 * 20 19 18 22 22 C 1.38233 * 119.99600 * 90.00262 * 17 16 15 23 23 C 1.53785 * 113.61238 * 180.02562 * 10 7 6 24 24 C 1.38745 * 119.91820 * 180.27199 * 5 4 2 25 25 C 1.38129 * 119.95111 * 359.48892 * 24 5 4 26 26 C 1.38376 * 120.04293 * 0.50843 * 25 24 5 27 27 Cl 1.73602 * 119.95988 * 179.76556 * 26 25 24 28 28 C 1.38163 * 120.01997 * 81.49307 * 4 2 1 29 29 H 0.96703 * 113.99803 * 175.28868 * 1 2 3 30 30 H 1.09005 * 109.46917 * 119.99181 * 2 1 3 31 31 H 1.48499 * 110.00007 * 179.97438 * 3 2 1 32 32 H 1.48500 * 109.99659 * 301.31490 * 3 2 1 33 33 H 1.08994 * 113.61264 * 25.47230 * 12 10 7 34 34 H 1.09002 * 113.69192 * 254.49457 * 12 10 7 35 35 H 1.08995 * 109.46780 * 299.99980 * 16 15 13 36 36 H 1.08994 * 109.47222 * 60.00214 * 16 15 13 37 37 H 1.07998 * 120.00192 * 0.02562 * 18 17 16 38 38 H 1.07997 * 119.99808 * 180.25457 * 19 18 17 39 39 H 1.08004 * 120.00250 * 179.79249 * 20 19 18 40 40 H 1.07997 * 120.00384 * 180.02562 * 21 20 19 41 41 H 1.07997 * 120.00283 * 359.97425 * 22 17 16 42 42 H 1.09005 * 113.61202 * 105.47374 * 23 10 7 43 43 H 1.08994 * 113.62014 * 334.56641 * 23 10 7 44 44 H 1.08003 * 120.02595 * 179.72313 * 24 5 4 45 45 H 1.08002 * 119.97469 * 180.22979 * 25 24 5 46 46 H 1.08007 * 119.98010 * 359.96096 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7104 -1.2303 5 6 2.3306 -2.0364 -1.1516 6 8 2.2695 -2.6961 0.0352 7 16 3.5987 -2.7675 0.7730 8 8 4.5494 -3.0518 -0.2441 9 8 3.3628 -3.6847 1.8324 10 6 3.8452 -1.0925 1.4244 11 1 3.6917 -0.3189 0.6719 12 6 3.0983 -0.8278 2.7455 13 6 4.3483 -0.0580 3.2037 14 1 4.6074 -0.2284 4.2486 15 8 4.3265 1.3279 2.8562 16 6 4.1864 2.2055 3.9753 17 6 4.1761 3.6339 3.4952 18 6 5.3617 4.3374 3.3930 19 6 5.3526 5.6463 2.9485 20 6 4.1569 6.2548 2.6153 21 6 2.9708 5.5529 2.7220 22 6 2.9804 4.2425 3.1624 23 6 5.1507 -0.9269 2.2201 24 6 2.7982 -2.6867 -2.2845 25 6 2.8554 -2.0158 -3.4906 26 6 2.4566 -0.6930 -3.5671 27 17 2.5352 0.1499 -5.0827 28 6 1.9951 -0.0413 -2.4374 29 1 -0.3933 -0.8805 -0.0726 30 1 1.7923 -0.5137 0.8901 31 1 3.5349 1.7703 0.0006 32 1 1.5354 2.4770 -1.1922 33 1 2.9041 -1.7299 3.3255 34 1 2.2156 -0.1986 2.6311 35 1 3.2516 1.9887 4.4922 36 1 5.0223 2.0585 4.6592 37 1 6.2954 3.8632 3.6569 38 1 6.2792 6.1945 2.8647 39 1 4.1495 7.2785 2.2711 40 1 2.0367 6.0281 2.4613 41 1 2.0537 3.6942 3.2461 42 1 5.9233 -0.3775 1.6820 43 1 5.5169 -1.8561 2.6567 44 1 3.1136 -3.7179 -2.2242 45 1 3.2158 -2.5228 -4.3735 46 1 1.6840 0.9912 -2.4992 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_80032_15608174.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:17:50 Heat of formation + Delta-G solvation = -82.234025 kcal Electronic energy + Delta-G solvation = -36117.752121 eV Core-core repulsion = 31287.820983 eV Total energy + Delta-G solvation = -4829.931139 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.072 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -42.67896 -40.98791 -40.07678 -39.76257 -38.44506 -38.10719 -37.38241 -37.30830 -37.12607 -33.21375 -32.75182 -31.85245 -31.55976 -28.16092 -27.36120 -27.03157 -26.38138 -24.99200 -23.54168 -23.43102 -22.34320 -22.05695 -21.12461 -19.87256 -19.24373 -18.99756 -18.61543 -18.09040 -17.89087 -17.45367 -17.29141 -16.77390 -16.58901 -16.46186 -16.21531 -15.87580 -15.68169 -15.48083 -15.38153 -15.02721 -14.69307 -14.62985 -14.36090 -14.27553 -14.18690 -13.99048 -13.89811 -13.74040 -13.69733 -13.61935 -13.36806 -13.28868 -13.26839 -13.18713 -12.58460 -12.37312 -12.32745 -12.20816 -12.00343 -11.97285 -11.87858 -11.62344 -11.37008 -11.24269 -10.71640 -10.52912 -10.07834 -9.86620 -9.81500 -5.01656 -1.28703 -0.43868 -0.30830 0.27652 0.45759 0.71212 0.83032 1.09180 1.57522 1.77022 1.93248 2.27242 2.35062 2.54790 2.77705 2.91626 2.97199 3.09457 3.26042 3.27334 3.50789 3.57526 3.59200 3.67681 3.69533 3.79805 3.82983 3.96833 4.01630 4.06101 4.17716 4.20000 4.21838 4.23762 4.30280 4.39191 4.43941 4.53614 4.57649 4.58929 4.65655 4.67352 4.68898 4.70126 4.73576 5.00261 5.08144 5.19471 5.49470 5.57768 5.59299 5.99680 6.04153 6.31421 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.093 4.093 3 Si 0.732 3.268 4 C -0.106 4.106 5 C 0.075 3.925 6 O -0.657 6.657 7 S 2.589 3.411 8 O -0.945 6.945 9 O -0.914 6.914 10 C -0.652 4.652 11 H 0.153 0.847 12 C -0.137 4.137 13 C 0.081 3.919 14 H 0.093 0.907 15 O -0.354 6.354 16 C 0.099 3.901 17 C -0.095 4.095 18 C -0.099 4.099 19 C -0.124 4.124 20 C -0.112 4.112 21 C -0.123 4.123 22 C -0.100 4.100 23 C -0.104 4.104 24 C -0.072 4.072 25 C -0.087 4.087 26 C -0.016 4.016 27 Cl -0.043 7.043 28 C -0.093 4.093 29 H 0.372 0.628 30 H 0.078 0.922 31 H -0.229 1.229 32 H -0.244 1.244 33 H 0.119 0.881 34 H 0.101 0.899 35 H 0.066 0.934 36 H 0.063 0.937 37 H 0.122 0.878 38 H 0.123 0.877 39 H 0.123 0.877 40 H 0.126 0.874 41 H 0.128 0.872 42 H 0.103 0.897 43 H 0.107 0.893 44 H 0.158 0.842 45 H 0.157 0.843 46 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.041 3.457 2.940 4.538 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.201 4.201 3 Si 0.628 3.372 4 C -0.109 4.109 5 C 0.033 3.967 6 O -0.615 6.615 7 S 2.685 3.315 8 O -0.943 6.943 9 O -0.913 6.913 10 C -0.759 4.759 11 H 0.171 0.829 12 C -0.175 4.175 13 C 0.022 3.978 14 H 0.111 0.889 15 O -0.273 6.273 16 C 0.024 3.976 17 C -0.095 4.095 18 C -0.117 4.117 19 C -0.142 4.142 20 C -0.131 4.131 21 C -0.141 4.141 22 C -0.118 4.118 23 C -0.142 4.142 24 C -0.093 4.093 25 C -0.106 4.106 26 C -0.043 4.043 27 Cl -0.014 7.014 28 C -0.112 4.112 29 H 0.220 0.780 30 H 0.096 0.904 31 H -0.152 1.152 32 H -0.168 1.168 33 H 0.137 0.863 34 H 0.120 0.880 35 H 0.084 0.916 36 H 0.081 0.919 37 H 0.140 0.860 38 H 0.141 0.859 39 H 0.141 0.859 40 H 0.144 0.856 41 H 0.146 0.854 42 H 0.121 0.879 43 H 0.125 0.875 44 H 0.176 0.824 45 H 0.174 0.826 46 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 0.469 4.033 2.197 4.617 hybrid contribution -0.080 -1.127 -0.494 1.233 sum 0.390 2.906 1.704 3.391 Atomic orbital electron populations 1.86765 1.15560 1.34149 1.96439 1.25854 0.86135 1.13804 0.94315 0.92779 0.80753 0.75772 0.87942 1.20424 1.01001 0.92214 0.97266 1.17884 1.06262 0.90186 0.82330 1.85725 1.60789 1.76119 1.38905 1.05762 0.73242 0.77355 0.75137 1.93661 1.62186 1.83367 1.55097 1.93668 1.82735 1.58171 1.56694 1.32430 1.08889 1.25141 1.09483 0.82939 1.23495 0.99268 1.03135 0.91603 1.22792 0.94614 0.82019 0.98390 0.88888 1.87995 1.93626 1.13823 1.31879 1.21481 1.01453 0.86499 0.88210 1.19539 0.93809 0.94234 1.01939 1.21082 0.97518 0.94564 0.98514 1.21194 0.98360 0.95144 0.99457 1.21277 0.92703 1.00108 0.98966 1.21226 0.98474 0.94630 0.99760 1.21129 0.97661 0.95113 0.97858 1.22847 0.93704 1.01366 0.96318 1.21465 0.95847 1.01698 0.90252 1.21130 0.98532 0.92346 0.98599 1.21117 1.01177 0.93610 0.88440 1.98430 1.96576 1.77271 1.29112 1.20989 0.98968 1.01216 0.89980 0.77984 0.90385 1.15216 1.16833 0.86316 0.88046 0.91602 0.91874 0.85976 0.85861 0.85875 0.85553 0.85412 0.87888 0.87452 0.82450 0.82585 0.82947 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.06 12.68 -35.23 -0.45 -0.51 16 2 C -0.09 -0.02 2.05 36.00 0.07 0.06 16 3 Si 0.73 0.23 29.52 -169.99 -5.02 -4.79 16 4 C -0.11 -0.13 4.25 -104.48 -0.44 -0.57 16 5 C 0.08 0.13 4.92 -39.23 -0.19 -0.06 16 6 O -0.66 -1.15 9.15 -51.82 -0.47 -1.63 16 7 S 2.59 5.10 5.13 -107.50 -0.55 4.54 16 8 O -0.94 -3.73 15.70 -67.04 -1.05 -4.78 16 9 O -0.91 -3.84 17.28 -67.04 -1.16 -5.00 16 10 C -0.65 0.32 2.71 -25.77 -0.07 0.25 16 11 H 0.15 -0.05 4.03 -51.93 -0.21 -0.26 16 12 C -0.14 0.31 6.76 -25.77 -0.17 0.13 16 13 C 0.08 -0.19 4.36 -25.89 -0.11 -0.30 16 14 H 0.09 -0.41 7.88 -51.93 -0.41 -0.82 16 15 O -0.35 0.30 10.25 -35.23 -0.36 -0.06 16 16 C 0.10 -0.21 5.91 36.01 0.21 0.01 16 17 C -0.10 0.05 5.51 -104.62 -0.58 -0.53 16 18 C -0.10 0.02 9.70 -39.58 -0.38 -0.37 16 19 C -0.12 0.03 10.05 -39.59 -0.40 -0.37 16 20 C -0.11 0.05 10.05 -39.58 -0.40 -0.35 16 21 C -0.12 0.09 10.05 -39.58 -0.40 -0.30 16 22 C -0.10 0.09 9.70 -39.58 -0.38 -0.29 16 23 C -0.10 0.18 7.50 -25.89 -0.19 -0.01 16 24 C -0.07 -0.08 8.54 -39.43 -0.34 -0.42 16 25 C -0.09 -0.01 9.82 -39.57 -0.39 -0.40 16 26 C -0.02 -0.01 6.32 -39.49 -0.25 -0.26 16 27 Cl -0.04 -0.04 28.95 -51.86 -1.50 -1.54 16 28 C -0.09 -0.12 8.44 -39.57 -0.33 -0.45 16 29 H 0.37 -0.81 9.03 45.56 0.41 -0.40 16 30 H 0.08 -0.08 2.52 -51.93 -0.13 -0.21 16 31 H -0.23 -0.42 6.91 56.52 0.39 -0.02 16 32 H -0.24 -0.45 6.47 56.52 0.37 -0.09 16 33 H 0.12 -0.36 7.43 -51.93 -0.39 -0.74 16 34 H 0.10 -0.34 6.81 -51.93 -0.35 -0.69 16 35 H 0.07 -0.24 8.09 -51.93 -0.42 -0.66 16 36 H 0.06 -0.20 8.08 -51.93 -0.42 -0.62 16 37 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 38 H 0.12 -0.21 8.06 -52.49 -0.42 -0.63 16 39 H 0.12 -0.25 8.06 -52.48 -0.42 -0.67 16 40 H 0.13 -0.32 8.06 -52.49 -0.42 -0.75 16 41 H 0.13 -0.38 8.06 -52.49 -0.42 -0.80 16 42 H 0.10 -0.18 8.14 -51.93 -0.42 -0.60 16 43 H 0.11 -0.36 8.10 -51.93 -0.42 -0.78 16 44 H 0.16 -0.01 7.84 -52.48 -0.41 -0.43 16 45 H 0.16 -0.35 8.06 -52.49 -0.42 -0.77 16 46 H 0.15 0.13 5.87 -52.48 -0.31 -0.18 16 LS Contribution 400.86 15.07 6.04 6.04 Total: 0.00 -8.17 400.86 -14.53 -22.71 By element: Atomic # 1 Polarization: -5.46 SS G_CDS: -5.26 Total: -10.72 kcal Atomic # 6 Polarization: 0.50 SS G_CDS: -4.75 Total: -4.25 kcal Atomic # 8 Polarization: -8.50 SS G_CDS: -3.49 Total: -11.99 kcal Atomic # 14 Polarization: 0.23 SS G_CDS: -5.02 Total: -4.79 kcal Atomic # 16 Polarization: 5.10 SS G_CDS: -0.55 Total: 4.54 kcal Atomic # 17 Polarization: -0.04 SS G_CDS: -1.50 Total: -1.54 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -8.17 -14.53 -22.71 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_80032_15608174.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.527 kcal (2) G-P(sol) polarization free energy of solvation -8.172 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.699 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.535 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.707 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.234 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds