Wall clock time and date at job start Mon Mar 8 2021 12:04:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45195 * 109.47520 * 2 1 4 4 C 1.34226 * 117.00179 * 179.97438 * 3 2 1 5 5 O 1.20827 * 119.99714 * 0.02562 * 4 3 2 6 6 C 1.50700 * 120.00289 * 179.97438 * 4 3 2 7 7 H 1.09002 * 112.90833 * 311.25778 * 6 4 3 8 8 C 1.53781 * 113.61174 * 82.50740 * 6 4 3 9 9 C 1.53782 * 87.08319 * 139.98345 * 8 6 4 10 10 F 1.39900 * 113.69166 * 89.12598 * 9 8 6 11 11 C 1.52997 * 113.61489 * 220.01871 * 9 8 6 12 12 S 1.81399 * 109.47112 * 282.49596 * 11 9 8 13 13 O 1.42101 * 110.54434 * 74.01923 * 12 11 9 14 14 O 1.42101 * 110.54197 * 297.27054 * 12 11 9 15 15 O 1.52200 * 104.45066 * 185.64669 * 12 11 9 16 16 C 1.36009 * 113.99496 * 284.30542 * 15 12 11 17 17 C 1.38578 * 120.07480 * 270.74926 * 16 15 12 18 18 I 2.09500 * 120.00555 * 0.02654 * 17 16 15 19 19 C 1.38330 * 119.98937 * 180.29989 * 17 16 15 20 20 C 1.38205 * 120.14029 * 359.72240 * 19 17 16 21 21 C 1.50700 * 119.92588 * 179.97438 * 20 19 17 22 22 O 1.42905 * 109.47228 * 245.02315 * 21 20 19 23 23 Si 1.86295 * 109.47065 * 5.02328 * 21 20 19 24 24 C 1.38286 * 120.15063 * 0.02562 * 20 19 17 25 25 C 1.38542 * 120.00983 * 359.97438 * 24 20 19 26 26 O 1.35988 * 120.06918 * 180.02562 * 25 24 20 27 27 C 1.42898 * 117.00360 * 359.97438 * 26 25 24 28 28 C 1.53777 * 113.61578 * 180.02562 * 6 4 3 29 29 H 1.09005 * 109.47181 * 300.00347 * 1 2 3 30 30 H 1.08998 * 109.46765 * 59.99858 * 1 2 3 31 31 H 1.08995 * 109.47627 * 180.02562 * 1 2 3 32 32 H 1.08997 * 109.46869 * 239.99579 * 2 1 3 33 33 H 1.09008 * 109.46860 * 120.00044 * 2 1 3 34 34 H 1.09001 * 113.61711 * 25.43016 * 8 6 4 35 35 H 1.09006 * 113.61495 * 254.53296 * 8 6 4 36 36 H 1.08994 * 109.47092 * 162.49426 * 11 9 8 37 37 H 1.09003 * 109.47157 * 42.49221 * 11 9 8 38 38 H 1.07996 * 119.93011 * 179.70867 * 19 17 16 39 39 H 1.08998 * 109.46998 * 125.02294 * 21 20 19 40 40 H 0.96692 * 113.99983 * 179.97438 * 22 21 20 41 41 H 1.48502 * 110.00061 * 178.68437 * 23 21 20 42 42 H 1.48499 * 110.00354 * 299.99963 * 23 21 20 43 43 H 1.08004 * 119.99607 * 179.97438 * 24 20 19 44 44 H 1.08992 * 109.47422 * 180.02562 * 27 26 25 45 45 H 1.09009 * 109.46963 * 300.00079 * 27 26 25 46 46 H 1.09004 * 109.46974 * 59.99923 * 27 26 25 47 47 H 1.09000 * 113.61240 * 105.47485 * 28 6 4 48 48 H 1.08999 * 113.61482 * 334.56853 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5447 0.0005 5 8 4.0807 0.5864 0.0005 6 6 3.9209 2.9372 0.0000 7 1 3.4717 3.5820 -0.7554 8 6 3.9859 3.5775 1.3967 9 6 5.3563 4.1428 0.9876 10 9 5.2853 5.3934 0.3646 11 6 6.3980 4.0950 2.1072 12 16 6.0849 5.4410 3.2822 13 8 4.9477 5.1495 4.0829 14 8 6.2278 6.7029 2.6446 15 8 7.2546 5.3768 4.2538 16 6 7.1723 4.3589 5.1521 17 6 6.5261 4.5515 6.3627 18 53 5.6738 6.4121 6.8109 19 6 6.4488 3.5168 7.2776 20 6 7.0099 2.2883 6.9847 21 6 6.9234 1.1646 7.9852 22 8 8.2356 0.8327 8.4436 23 14 5.8774 1.6995 9.4310 24 6 7.6516 2.0880 5.7763 25 6 7.7327 3.1200 4.8554 26 8 8.3630 2.9243 3.6664 27 6 8.9197 1.6291 3.4327 28 6 5.4584 2.9678 0.0001 29 1 -0.3634 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3634 -1.0276 0.0005 32 1 1.8933 -0.5139 -0.8899 33 1 1.8933 -0.5139 0.8901 34 1 4.0376 2.8513 2.2079 35 1 3.2288 4.3442 1.5613 36 1 7.3947 4.2091 1.6811 37 1 6.3315 3.1381 2.6248 38 1 5.9490 3.6695 8.2227 39 1 6.4719 0.2919 7.5133 40 1 8.2561 0.1156 9.0918 41 1 5.7580 0.5893 10.4099 42 1 6.4823 2.8887 10.0831 43 1 8.0896 1.1270 5.5502 44 1 9.3922 1.6086 2.4507 45 1 9.6641 1.4101 4.1983 46 1 8.1279 0.8810 3.4711 47 1 5.8896 3.2425 -0.9625 48 1 5.9128 2.0749 0.4294 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) I: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_80155_16464788.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:04:19 Heat of formation + Delta-G solvation = -205.774344 kcal Electronic energy + Delta-G solvation = -41273.211973 eV Core-core repulsion = 35585.730913 eV Total energy + Delta-G solvation = -5687.481060 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 531.013 amu Computer time = 2.49 seconds Orbital eigenvalues (eV) -49.10798 -42.83184 -41.82025 -40.54756 -39.51870 -39.36772 -38.24228 -37.68810 -37.47474 -37.12190 -33.61075 -32.88879 -32.31785 -31.93101 -29.46275 -28.83405 -27.41888 -27.18915 -26.92102 -24.08090 -23.70876 -23.40565 -22.36169 -21.59567 -20.90675 -19.82737 -19.24547 -19.14950 -18.95626 -18.66799 -18.56142 -17.87057 -17.67227 -17.61022 -17.20514 -17.16342 -16.80902 -16.40363 -16.26612 -16.10129 -15.91760 -15.53426 -15.35075 -15.19318 -14.71388 -14.62311 -14.56689 -14.39037 -14.27565 -14.07186 -13.97791 -13.81777 -13.75954 -13.57721 -13.22492 -13.17522 -13.13670 -13.08457 -13.00779 -12.97094 -12.82024 -12.64730 -12.60148 -12.51228 -12.45876 -11.94260 -11.90984 -11.58744 -11.50181 -11.39217 -11.32888 -11.02301 -10.81262 -10.12842 -9.80715 -5.15841 -1.22742 -0.44773 -0.32838 -0.22679 0.88801 0.98166 1.03256 1.39613 1.51729 1.63912 1.74577 1.85602 2.42139 2.57194 2.68427 2.83344 2.84304 2.87115 3.08005 3.18577 3.25429 3.31231 3.44616 3.60377 3.67273 3.70100 3.76603 3.85737 3.88780 3.89497 3.93999 4.01360 4.03110 4.22665 4.23279 4.25437 4.27462 4.30175 4.33318 4.41094 4.52228 4.58173 4.63625 4.66524 4.75995 4.81242 4.89240 4.92700 4.97989 5.37597 5.68736 6.13642 6.63764 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.061 3.939 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.504 6.504 6 C -0.109 4.109 7 H 0.139 0.861 8 C -0.147 4.147 9 C 0.102 3.898 10 F -0.168 7.168 11 C -0.661 4.661 12 S 2.579 3.421 13 O -0.931 6.931 14 O -0.900 6.900 15 O -0.645 6.645 16 C 0.067 3.933 17 C -0.041 4.041 18 I 0.020 6.980 19 C -0.104 4.104 20 C -0.009 4.009 21 C -0.080 4.080 22 O -0.533 6.533 23 Si 0.677 3.323 24 C -0.150 4.150 25 C 0.129 3.871 26 O -0.308 6.308 27 C 0.017 3.983 28 C -0.120 4.120 29 H 0.069 0.931 30 H 0.068 0.932 31 H 0.082 0.918 32 H 0.071 0.929 33 H 0.071 0.929 34 H 0.116 0.884 35 H 0.110 0.890 36 H 0.158 0.842 37 H 0.152 0.848 38 H 0.151 0.849 39 H 0.088 0.912 40 H 0.386 0.614 41 H -0.251 1.251 42 H -0.245 1.245 43 H 0.155 0.845 44 H 0.113 0.887 45 H 0.068 0.932 46 H 0.066 0.934 47 H 0.101 0.899 48 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.879 -8.644 1.172 8.923 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.013 4.013 3 O -0.269 6.269 4 C 0.319 3.681 5 O -0.392 6.392 6 C -0.128 4.128 7 H 0.156 0.844 8 C -0.185 4.185 9 C 0.082 3.918 10 F -0.148 7.148 11 C -0.786 4.786 12 S 2.673 3.327 13 O -0.929 6.929 14 O -0.898 6.898 15 O -0.603 6.603 16 C 0.021 3.979 17 C -0.184 4.184 18 I 0.169 6.831 19 C -0.124 4.124 20 C -0.011 4.011 21 C -0.189 4.189 22 O -0.341 6.341 23 Si 0.576 3.424 24 C -0.169 4.169 25 C 0.080 3.920 26 O -0.221 6.221 27 C -0.077 4.077 28 C -0.158 4.158 29 H 0.088 0.912 30 H 0.087 0.913 31 H 0.100 0.900 32 H 0.090 0.910 33 H 0.090 0.910 34 H 0.134 0.866 35 H 0.129 0.871 36 H 0.176 0.824 37 H 0.171 0.829 38 H 0.168 0.832 39 H 0.106 0.894 40 H 0.235 0.765 41 H -0.176 1.176 42 H -0.170 1.170 43 H 0.173 0.827 44 H 0.132 0.868 45 H 0.086 0.914 46 H 0.084 0.916 47 H 0.120 0.880 48 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -2.257 -6.176 2.035 6.883 hybrid contribution 1.848 -2.636 -0.603 3.276 sum -0.409 -8.812 1.432 8.937 Atomic orbital electron populations 1.21830 0.92193 1.03314 1.03821 1.23120 0.95751 0.79641 1.02774 1.86525 1.24016 1.32927 1.83460 1.23221 0.80874 0.91809 0.72200 1.90677 1.60570 1.42730 1.45184 1.22482 0.97230 0.92056 1.01037 0.84367 1.23812 0.96170 1.01933 0.96549 1.21205 0.95321 0.82221 0.93051 1.93021 1.96991 1.41414 1.83420 1.31284 1.09659 1.23156 1.14464 1.06179 0.74030 0.76765 0.75761 1.93711 1.50118 1.85787 1.63302 1.93696 1.84068 1.36187 1.75844 1.85823 1.68329 1.53966 1.52155 1.16828 1.07207 0.83281 0.90583 1.24462 1.00061 0.99757 0.94076 1.97046 1.80764 1.11995 1.93246 1.20828 1.01224 0.90915 0.99469 1.19257 0.94811 0.93425 0.93640 1.24803 0.91229 0.98875 1.04025 1.86570 1.25342 1.58797 1.63374 0.94914 0.87693 0.81803 0.77970 1.21152 1.02799 0.99435 0.93516 1.18918 0.93738 0.91989 0.87377 1.86178 1.68504 1.35917 1.31547 1.23366 0.98652 0.81648 1.04081 1.23575 0.93655 0.97758 1.00834 0.91228 0.91292 0.89958 0.91023 0.91022 0.86570 0.87143 0.82395 0.82949 0.83224 0.89365 0.76501 1.17563 1.16953 0.82707 0.86850 0.91368 0.91551 0.88016 0.86216 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.35 10.29 37.16 0.38 0.73 16 2 C 0.06 -0.04 6.19 37.16 0.23 0.19 16 3 O -0.35 -0.32 10.22 -39.25 -0.40 -0.72 16 4 C 0.48 0.48 7.48 36.01 0.27 0.75 16 5 O -0.50 -1.57 15.65 -18.75 -0.29 -1.87 16 6 C -0.11 0.10 4.24 -90.96 -0.39 -0.29 16 7 H 0.14 -0.31 8.14 -51.93 -0.42 -0.73 16 8 C -0.15 0.13 7.03 -25.92 -0.18 -0.05 16 9 C 0.10 0.02 1.57 -89.79 -0.14 -0.12 16 10 F -0.17 -0.46 16.28 2.25 0.04 -0.43 16 11 C -0.66 0.14 4.07 37.16 0.15 0.29 16 12 S 2.58 9.38 4.84 -107.50 -0.52 8.86 16 13 O -0.93 -3.44 14.53 -67.04 -0.97 -4.42 16 14 O -0.90 -6.42 17.36 -67.04 -1.16 -7.58 16 15 O -0.64 -2.42 9.09 -54.26 -0.49 -2.92 16 16 C 0.07 0.17 4.81 -39.11 -0.19 -0.02 16 17 C -0.04 -0.10 5.54 -39.42 -0.22 -0.32 16 18 I 0.02 0.07 37.69 -73.02 -2.75 -2.69 16 19 C -0.10 -0.03 8.37 -39.56 -0.33 -0.37 16 20 C -0.01 0.01 5.38 -104.62 -0.56 -0.56 16 21 C -0.08 0.21 2.79 36.01 0.10 0.31 16 22 O -0.53 0.91 12.81 -35.23 -0.45 0.46 16 23 Si 0.68 -1.72 29.84 -169.99 -5.07 -6.79 16 24 C -0.15 0.20 8.67 -39.45 -0.34 -0.14 16 25 C 0.13 0.02 5.92 -39.12 -0.23 -0.21 16 26 O -0.31 0.38 7.55 -34.19 -0.26 0.13 16 27 C 0.02 -0.08 9.81 101.05 0.99 0.92 16 28 C -0.12 0.16 6.86 -25.90 -0.18 -0.02 16 29 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 30 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 32 H 0.07 -0.04 8.13 -51.93 -0.42 -0.47 16 33 H 0.07 -0.06 8.13 -51.92 -0.42 -0.49 16 34 H 0.12 -0.25 7.99 -51.93 -0.41 -0.66 16 35 H 0.11 -0.15 8.14 -51.93 -0.42 -0.57 16 36 H 0.16 -0.27 7.92 -51.93 -0.41 -0.68 16 37 H 0.15 -0.40 6.45 -51.92 -0.33 -0.73 16 38 H 0.15 -0.17 4.85 -52.49 -0.25 -0.42 16 39 H 0.09 -0.45 7.96 -51.93 -0.41 -0.86 16 40 H 0.39 -2.14 8.74 45.56 0.40 -1.74 16 41 H -0.25 0.22 7.11 56.52 0.40 0.62 16 42 H -0.25 -0.11 7.05 56.52 0.40 0.29 16 43 H 0.16 -0.58 6.30 -52.48 -0.33 -0.91 16 44 H 0.11 -0.67 8.14 -51.93 -0.42 -1.09 16 45 H 0.07 -0.33 7.66 -51.92 -0.40 -0.73 16 46 H 0.07 -0.39 7.66 -51.93 -0.40 -0.79 16 47 H 0.10 -0.21 8.14 -51.93 -0.42 -0.64 16 48 H 0.12 -0.23 7.39 -51.93 -0.38 -0.61 16 LS Contribution 435.24 15.07 6.56 6.56 Total: 0.00 -11.02 435.24 -12.37 -23.39 By element: Atomic # 1 Polarization: -7.12 SS G_CDS: -5.95 Total: -13.06 kcal Atomic # 6 Polarization: 1.72 SS G_CDS: -0.64 Total: 1.09 kcal Atomic # 8 Polarization: -12.88 SS G_CDS: -4.04 Total: -16.92 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.04 Total: -0.43 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.07 Total: -6.79 kcal Atomic # 16 Polarization: 9.38 SS G_CDS: -0.52 Total: 8.86 kcal Atomic # 53 Polarization: 0.07 SS G_CDS: -2.75 Total: -2.69 kcal Total LS contribution 6.56 Total: 6.56 kcal Total: -11.02 -12.37 -23.39 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_80155_16464788.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -182.389 kcal (2) G-P(sol) polarization free energy of solvation -11.019 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -193.408 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.366 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.385 kcal (6) G-S(sol) free energy of system = (1) + (5) -205.774 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.49 seconds