Wall clock time and date at job start Mon Mar 8 2021 11:51:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35995 * 117.00110 * 2 1 4 4 C 1.39107 * 120.06867 * 180.02562 * 3 2 1 5 5 O 1.36021 * 120.07292 * 359.95341 * 4 3 2 6 6 S 1.52197 * 114.00322 * 94.15741 * 5 4 3 7 7 O 1.42101 * 104.27505 * 40.10764 * 6 5 4 8 8 O 1.42102 * 104.28041 * 167.96299 * 6 5 4 9 9 C 1.81399 * 104.45061 * 284.03818 * 6 5 4 10 10 H 1.08998 * 112.85067 * 53.03384 * 9 6 5 11 11 C 1.53784 * 113.61636 * 184.23700 * 9 6 5 12 12 C 1.53786 * 87.07968 * 139.97789 * 11 9 6 13 13 H 1.08999 * 113.60773 * 219.93550 * 12 11 9 14 14 O 1.42897 * 113.61426 * 89.11883 * 12 11 9 15 15 C 1.42898 * 113.99910 * 149.99556 * 14 12 11 16 16 C 1.50697 * 109.46846 * 180.02562 * 15 14 12 17 17 C 1.38240 * 119.99977 * 269.72403 * 16 15 14 18 18 C 1.38236 * 120.00322 * 179.81068 * 17 16 15 19 19 C 1.38237 * 119.99608 * 0.40112 * 18 17 16 20 20 C 1.38234 * 120.00120 * 359.85517 * 19 18 17 21 21 C 1.38233 * 120.00294 * 90.00445 * 16 15 14 22 22 C 1.53776 * 87.08229 * 334.56707 * 12 11 9 23 23 C 1.38658 * 119.84957 * 179.97438 * 4 3 2 24 24 Cl 1.73604 * 120.01192 * 179.97438 * 23 4 3 25 25 C 1.38338 * 119.97725 * 359.97438 * 23 4 3 26 26 C 1.38245 * 120.13410 * 0.02562 * 25 23 4 27 27 C 1.50699 * 119.92498 * 179.97438 * 26 25 23 28 28 O 1.42909 * 109.47324 * 245.00107 * 27 26 25 29 29 Si 1.86303 * 109.47042 * 4.99715 * 27 26 25 30 30 C 1.38237 * 120.15724 * 359.97438 * 26 25 23 31 31 H 1.08997 * 109.46859 * 179.97438 * 1 2 3 32 32 H 1.08994 * 109.46872 * 300.00335 * 1 2 3 33 33 H 1.08998 * 109.46717 * 60.00065 * 1 2 3 34 34 H 1.08995 * 113.61220 * 254.52919 * 11 9 6 35 35 H 1.09003 * 113.61200 * 25.42673 * 11 9 6 36 36 H 1.08997 * 109.47032 * 299.99621 * 15 14 12 37 37 H 1.08993 * 109.46988 * 60.00011 * 15 14 12 38 38 H 1.08007 * 119.99862 * 0.02562 * 17 16 15 39 39 H 1.07995 * 120.00344 * 180.23705 * 18 17 16 40 40 H 1.07998 * 119.99761 * 179.83489 * 19 18 17 41 41 H 1.08001 * 120.00422 * 179.97438 * 20 19 18 42 42 H 1.08000 * 119.99785 * 359.97438 * 21 16 15 43 43 H 1.09006 * 113.61556 * 270.88703 * 22 12 11 44 44 H 1.08999 * 113.61312 * 139.98080 * 22 12 11 45 45 H 1.08003 * 119.92916 * 179.97438 * 25 23 4 46 46 H 1.09000 * 109.47540 * 124.99984 * 27 26 25 47 47 H 0.96697 * 114.00016 * 179.97438 * 28 27 26 48 48 H 1.48501 * 109.99956 * 178.68090 * 29 27 26 49 49 H 1.48498 * 110.00212 * 300.00335 * 29 27 26 50 50 H 1.07996 * 119.99220 * 180.27520 * 30 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4355 1.2862 -0.0005 5 8 4.1792 0.1472 -0.0001 6 16 4.6015 -0.3169 -1.3867 7 8 4.9395 0.8824 -2.0698 8 8 5.5782 -1.3188 -1.1385 9 6 3.1016 -1.0516 -2.0946 10 1 2.2427 -0.3817 -2.0543 11 6 3.3212 -1.6896 -3.4765 12 6 2.3929 -2.8246 -3.0127 13 1 2.7214 -3.8143 -3.3300 14 8 1.0118 -2.5834 -3.2888 15 6 0.2483 -3.7700 -3.5144 16 6 -1.1852 -3.3992 -3.7948 17 6 -2.0896 -3.2992 -2.7541 18 6 -3.4036 -2.9552 -3.0108 19 6 -3.8152 -2.7194 -4.3093 20 6 -2.9121 -2.8246 -5.3505 21 6 -1.5972 -3.1648 -5.0933 22 6 2.8052 -2.4682 -1.5748 23 6 4.0603 2.5240 -0.0011 24 17 5.7936 2.6218 -0.0011 25 6 3.3020 3.6810 -0.0016 26 6 1.9216 3.6061 -0.0011 27 6 1.1001 4.8695 -0.0011 28 8 0.3635 4.9588 1.2203 29 14 2.2286 6.3439 -0.1549 30 6 1.2929 2.3750 -0.0005 31 1 -0.3633 -1.0276 -0.0005 32 1 -0.3633 0.5139 0.8899 33 1 -0.3633 0.5138 -0.8900 34 1 2.9143 -1.1010 -4.2987 35 1 4.3484 -2.0095 -3.6514 36 1 0.6577 -4.3085 -4.3690 37 1 0.2933 -4.4047 -2.6295 38 1 -1.7687 -3.4864 -1.7399 39 1 -4.1092 -2.8733 -2.1974 40 1 -4.8424 -2.4533 -4.5102 41 1 -3.2338 -2.6408 -6.3650 42 1 -0.8916 -3.2470 -5.9069 43 1 3.6914 -3.0010 -1.2298 44 1 1.9816 -2.5083 -0.8618 45 1 3.7895 4.6448 -0.0016 46 1 0.4076 4.8527 -0.8426 47 1 -0.1886 5.7496 1.2896 48 1 1.4285 7.5945 -0.1881 49 1 3.1778 6.3783 0.9866 50 1 0.2144 2.3195 -0.0046 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_80432_15608174.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:51:22 Heat of formation + Delta-G solvation = -111.917388 kcal Electronic energy + Delta-G solvation = -40695.909617 eV Core-core repulsion = 35390.471500 eV Total energy + Delta-G solvation = -5305.438117 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 441.087 amu Computer time = 3.40 seconds Orbital eigenvalues (eV) -42.57676 -40.84613 -40.37406 -40.00127 -39.37130 -38.15030 -37.91975 -37.20048 -37.04669 -36.98019 -32.77635 -32.45158 -31.91168 -31.59161 -28.88899 -27.54062 -27.13937 -26.96837 -26.48136 -24.03343 -23.59587 -23.45995 -22.38194 -21.95934 -21.04820 -19.63248 -19.34296 -18.95121 -18.71016 -18.47221 -18.16048 -17.78290 -17.31550 -17.04746 -16.86523 -16.72943 -16.59737 -16.30082 -16.14873 -15.96835 -15.61563 -15.47914 -15.32399 -14.85204 -14.66780 -14.42099 -14.34510 -14.28410 -14.15108 -13.99789 -13.79666 -13.70162 -13.56450 -13.46375 -13.29130 -13.25001 -13.12463 -13.01339 -12.94462 -12.84977 -12.58570 -12.17712 -12.10883 -12.06522 -12.00396 -11.95079 -11.86745 -11.77929 -11.15421 -10.75618 -10.63600 -10.02376 -9.92636 -9.86498 -9.67768 -5.08308 -1.01177 -0.27308 -0.18715 0.23101 0.39694 0.73908 1.05279 1.07310 1.46117 1.80591 1.84761 1.97797 2.33379 2.64025 2.85535 2.93175 2.94830 3.03689 3.25588 3.36883 3.42268 3.47772 3.59876 3.74298 3.75764 3.78595 3.80852 3.90144 3.95595 4.00200 4.02048 4.08781 4.12487 4.14464 4.20609 4.32687 4.35406 4.36846 4.42617 4.50716 4.53736 4.61700 4.63095 4.72197 4.77625 4.84067 4.90627 4.92818 4.94991 5.01931 5.02127 5.43652 5.51612 5.54862 5.83828 5.96273 6.09126 6.19958 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.299 6.299 3 C 0.145 3.855 4 C 0.043 3.957 5 O -0.643 6.643 6 S 2.582 3.418 7 O -0.942 6.942 8 O -0.922 6.922 9 C -0.626 4.626 10 H 0.157 0.843 11 C -0.110 4.110 12 C 0.079 3.921 13 H 0.088 0.912 14 O -0.355 6.355 15 C 0.101 3.899 16 C -0.093 4.093 17 C -0.100 4.100 18 C -0.124 4.124 19 C -0.113 4.113 20 C -0.122 4.122 21 C -0.098 4.098 22 C -0.124 4.124 23 C 0.031 3.969 24 Cl -0.016 7.016 25 C -0.133 4.133 26 C -0.001 4.001 27 C -0.080 4.080 28 O -0.533 6.533 29 Si 0.682 3.318 30 C -0.166 4.166 31 H 0.110 0.890 32 H 0.065 0.935 33 H 0.065 0.935 34 H 0.100 0.900 35 H 0.104 0.896 36 H 0.062 0.938 37 H 0.062 0.938 38 H 0.122 0.878 39 H 0.124 0.876 40 H 0.123 0.877 41 H 0.125 0.875 42 H 0.123 0.877 43 H 0.109 0.891 44 H 0.096 0.904 45 H 0.154 0.846 46 H 0.088 0.912 47 H 0.385 0.615 48 H -0.253 1.253 49 H -0.247 1.247 50 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.626 0.576 -3.092 8.249 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.212 6.212 3 C 0.096 3.904 4 C -0.001 4.001 5 O -0.601 6.601 6 S 2.678 3.322 7 O -0.940 6.940 8 O -0.920 6.920 9 C -0.733 4.733 10 H 0.175 0.825 11 C -0.149 4.149 12 C 0.019 3.981 13 H 0.105 0.895 14 O -0.274 6.274 15 C 0.024 3.976 16 C -0.093 4.093 17 C -0.118 4.118 18 C -0.142 4.142 19 C -0.131 4.131 20 C -0.140 4.140 21 C -0.116 4.116 22 C -0.163 4.163 23 C 0.002 3.998 24 Cl 0.014 6.986 25 C -0.151 4.151 26 C -0.002 4.002 27 C -0.189 4.189 28 O -0.341 6.341 29 Si 0.581 3.419 30 C -0.185 4.185 31 H 0.128 0.872 32 H 0.083 0.917 33 H 0.083 0.917 34 H 0.118 0.882 35 H 0.122 0.878 36 H 0.080 0.920 37 H 0.080 0.920 38 H 0.140 0.860 39 H 0.142 0.858 40 H 0.141 0.859 41 H 0.143 0.857 42 H 0.141 0.859 43 H 0.127 0.873 44 H 0.115 0.885 45 H 0.171 0.829 46 H 0.106 0.894 47 H 0.234 0.766 48 H -0.178 1.178 49 H -0.171 1.171 50 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -6.139 0.838 -2.367 6.633 hybrid contribution -1.598 -0.211 0.554 1.705 sum -7.737 0.626 -1.813 7.971 Atomic orbital electron populations 1.23295 0.76513 1.05254 1.02212 1.86203 1.22867 1.24622 1.87483 1.18805 0.89436 0.86390 0.95785 1.16782 0.85963 0.81842 1.15522 1.85740 1.71663 1.45224 1.57468 1.06045 0.76953 0.75445 0.73791 1.93676 1.82389 1.43706 1.74246 1.93643 1.55020 1.61188 1.82139 1.32076 1.22405 1.09729 1.09130 0.82509 1.22889 1.00782 0.97308 0.93889 1.22825 0.82335 0.98123 0.94766 0.89453 1.87960 1.18438 1.30247 1.90730 1.21436 0.88254 0.87296 1.00567 1.19560 0.94035 1.01956 0.93740 1.21064 0.93314 0.98777 0.98643 1.21186 0.95989 0.99951 0.97050 1.21265 0.99828 0.99052 0.92934 1.21208 0.93447 0.99904 0.99478 1.21099 0.96174 0.98148 0.96182 1.23163 1.03894 0.90600 0.98618 1.20642 0.87499 0.92129 0.99521 1.98442 1.05951 1.98325 1.95889 1.20774 0.92663 0.97479 1.04197 1.19121 0.92166 0.94005 0.94936 1.24809 1.00917 1.03279 0.89922 1.86573 1.62416 1.47794 1.37327 0.94807 0.81712 0.75474 0.89862 1.21100 1.01226 0.90032 1.06135 0.87161 0.91685 0.91670 0.88180 0.87755 0.91979 0.92016 0.85985 0.85810 0.85854 0.85740 0.85862 0.87289 0.88526 0.82876 0.89397 0.76579 1.17786 1.17145 0.82869 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.30 -0.04 7.96 -34.25 -0.27 -0.32 16 3 C 0.14 0.20 5.93 -39.13 -0.23 -0.03 16 4 C 0.04 0.15 4.86 -39.10 -0.19 -0.04 16 5 O -0.64 -2.93 9.33 -54.31 -0.51 -3.43 16 6 S 2.58 10.58 5.02 -107.50 -0.54 10.04 16 7 O -0.94 -5.06 14.59 -67.04 -0.98 -6.04 16 8 O -0.92 -6.09 17.39 -67.04 -1.17 -7.26 16 9 C -0.63 -0.51 3.26 -25.92 -0.08 -0.60 16 10 H 0.16 0.03 6.05 -51.93 -0.31 -0.28 16 11 C -0.11 0.05 7.50 -25.91 -0.19 -0.15 16 12 C 0.08 -0.06 4.37 -25.92 -0.11 -0.18 16 13 H 0.09 -0.22 7.87 -51.93 -0.41 -0.63 16 14 O -0.35 -0.07 10.25 -35.23 -0.36 -0.43 16 15 C 0.10 -0.11 5.90 36.00 0.21 0.11 16 16 C -0.09 0.00 5.51 -104.62 -0.58 -0.57 16 17 C -0.10 0.05 9.70 -39.58 -0.38 -0.33 16 18 C -0.12 0.08 10.05 -39.58 -0.40 -0.31 16 19 C -0.11 0.06 10.05 -39.58 -0.40 -0.34 16 20 C -0.12 0.03 10.05 -39.58 -0.40 -0.36 16 21 C -0.10 0.00 9.70 -39.58 -0.38 -0.38 16 22 C -0.12 0.02 7.47 -25.92 -0.19 -0.17 16 23 C 0.03 0.11 5.58 -39.39 -0.22 -0.11 16 24 Cl -0.02 -0.07 26.75 -51.86 -1.39 -1.46 16 25 C -0.13 -0.16 8.44 -39.54 -0.33 -0.50 16 26 C 0.00 0.00 5.38 -104.62 -0.56 -0.56 16 27 C -0.08 0.15 2.79 36.01 0.10 0.25 16 28 O -0.53 0.54 12.81 -35.23 -0.45 0.09 16 29 Si 0.68 -1.36 29.84 -169.99 -5.07 -6.43 16 30 C -0.17 0.02 8.67 -39.45 -0.34 -0.32 16 31 H 0.11 -0.47 8.14 -51.93 -0.42 -0.90 16 32 H 0.06 -0.24 7.67 -51.93 -0.40 -0.64 16 33 H 0.06 -0.25 7.66 -51.93 -0.40 -0.65 16 34 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 35 H 0.10 -0.17 8.10 -51.93 -0.42 -0.59 16 36 H 0.06 -0.13 8.08 -51.93 -0.42 -0.55 16 37 H 0.06 -0.13 8.08 -51.93 -0.42 -0.55 16 38 H 0.12 -0.26 8.06 -52.48 -0.42 -0.68 16 39 H 0.12 -0.30 8.06 -52.49 -0.42 -0.72 16 40 H 0.12 -0.27 8.06 -52.49 -0.42 -0.69 16 41 H 0.12 -0.23 8.06 -52.49 -0.42 -0.66 16 42 H 0.12 -0.15 8.06 -52.49 -0.42 -0.58 16 43 H 0.11 -0.04 7.51 -51.93 -0.39 -0.43 16 44 H 0.10 -0.07 8.10 -51.93 -0.42 -0.50 16 45 H 0.15 -0.09 4.85 -52.48 -0.25 -0.35 16 46 H 0.09 -0.37 7.96 -51.93 -0.41 -0.78 16 47 H 0.39 -1.90 8.74 45.56 0.40 -1.51 16 48 H -0.25 0.09 7.11 56.52 0.40 0.49 16 49 H -0.25 -0.25 7.05 56.52 0.40 0.15 16 50 H 0.15 -0.37 6.30 -52.49 -0.33 -0.70 16 LS Contribution 436.70 15.07 6.58 6.58 Total: 0.00 -10.38 436.70 -14.21 -24.59 By element: Atomic # 1 Polarization: -5.92 SS G_CDS: -6.35 Total: -12.27 kcal Atomic # 6 Polarization: 0.02 SS G_CDS: -3.70 Total: -3.68 kcal Atomic # 8 Polarization: -13.65 SS G_CDS: -3.74 Total: -17.38 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.07 Total: -6.43 kcal Atomic # 16 Polarization: 10.58 SS G_CDS: -0.54 Total: 10.04 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.39 Total: -1.46 kcal Total LS contribution 6.58 Total: 6.58 kcal Total: -10.38 -14.21 -24.59 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_80432_15608174.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.329 kcal (2) G-P(sol) polarization free energy of solvation -10.383 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.712 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.206 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.589 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.917 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.41 seconds