Wall clock time and date at job start Mon Mar 8 2021 12:51:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35993 * 117.00125 * 2 1 4 4 C 1.39104 * 120.06311 * 179.97438 * 3 2 1 5 5 O 1.36019 * 120.08035 * 359.97438 * 4 3 2 6 6 S 1.52204 * 113.99759 * 270.02153 * 5 4 3 7 7 O 1.42111 * 104.27517 * 191.07007 * 6 5 4 8 8 O 1.42103 * 104.27860 * 318.92473 * 6 5 4 9 9 C 1.81400 * 104.45020 * 74.99894 * 6 5 4 10 10 C 1.52999 * 109.47058 * 179.97438 * 9 6 5 11 11 H 1.08996 * 112.85490 * 314.67006 * 10 9 6 12 12 C 1.53779 * 113.61115 * 85.86451 * 10 9 6 13 13 C 1.54045 * 86.98861 * 89.16199 * 12 10 9 14 14 O 1.42910 * 113.68833 * 270.87397 * 13 12 10 15 15 C 1.42901 * 113.99640 * 162.73251 * 14 13 12 16 16 C 1.53001 * 113.62516 * 139.97772 * 13 12 10 17 17 F 1.39900 * 109.46782 * 323.60061 * 16 13 12 18 18 F 1.39906 * 109.46980 * 83.59721 * 16 13 12 19 19 F 1.39893 * 109.47482 * 203.60000 * 16 13 12 20 20 C 1.53779 * 87.07692 * 25.43012 * 13 12 10 21 21 C 1.38669 * 119.84444 * 180.02562 * 4 3 2 22 22 Cl 1.73603 * 120.00903 * 179.97438 * 21 4 3 23 23 C 1.38329 * 119.98063 * 0.02562 * 21 4 3 24 24 C 1.38256 * 120.13193 * 359.97438 * 23 21 4 25 25 C 1.50698 * 119.92529 * 180.02562 * 24 23 21 26 26 O 1.42907 * 109.47059 * 119.99603 * 25 24 23 27 27 Si 1.86302 * 109.46863 * 0.02562 * 25 24 23 28 28 C 1.38238 * 120.15321 * 0.27413 * 24 23 21 29 29 H 1.09001 * 109.47262 * 59.99476 * 1 2 3 30 30 H 1.09000 * 109.47422 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.46925 * 299.99465 * 1 2 3 32 32 H 1.08994 * 109.47033 * 299.99928 * 9 6 5 33 33 H 1.08994 * 109.47007 * 59.99954 * 9 6 5 34 34 H 1.09009 * 113.61525 * 203.66537 * 12 10 9 35 35 H 1.09000 * 113.61496 * 334.56499 * 12 10 9 36 36 H 1.08994 * 109.47580 * 66.86856 * 15 14 13 37 37 H 1.09008 * 109.46614 * 186.86642 * 15 14 13 38 38 H 1.09002 * 109.47442 * 306.86394 * 15 14 13 39 39 H 1.09000 * 113.61551 * 220.02618 * 20 13 12 40 40 H 1.09002 * 113.69148 * 89.13571 * 20 13 12 41 41 H 1.07999 * 119.93333 * 180.02562 * 23 21 4 42 42 H 1.08991 * 109.47178 * 240.00243 * 25 24 23 43 43 H 0.96703 * 113.99535 * 179.97438 * 26 25 24 44 44 H 1.48504 * 110.00026 * 59.99936 * 27 25 24 45 45 H 1.48501 * 109.99746 * 181.31760 * 27 25 24 46 46 H 1.07997 * 119.98631 * 179.70575 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4355 1.2860 0.0005 5 8 4.1791 0.1471 0.0016 6 16 4.5165 -0.3706 1.3925 7 8 5.4911 -1.3794 1.1641 8 8 4.8330 0.7992 2.1347 9 6 2.9689 -1.1043 1.9902 10 6 3.1813 -1.6675 3.3968 11 1 4.1036 -2.2412 3.4883 12 6 2.9902 -0.6265 4.5124 13 6 1.5026 -1.0264 4.5192 14 8 0.7009 -0.2715 3.6084 15 6 -0.5639 -0.8684 3.3151 16 6 0.8951 -1.1045 5.9213 17 9 1.8477 -1.6056 6.8150 18 9 0.4994 0.1737 6.3299 19 9 -0.2171 -1.9528 5.9012 20 6 1.9478 -2.3896 3.9640 21 6 4.0603 2.5239 0.0011 22 17 5.7936 2.6216 0.0024 23 6 3.3021 3.6809 0.0016 24 6 1.9216 3.6060 0.0011 25 6 1.1002 4.8695 0.0011 26 8 0.2762 4.9019 -1.1661 27 14 2.2343 6.3475 0.0011 28 6 1.2930 2.3749 0.0057 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 2.1917 -0.3407 2.0177 33 1 2.6651 -1.9080 1.3195 34 1 3.5134 -0.8750 5.4359 35 1 3.1667 0.3990 4.1876 36 1 -1.1842 -0.8642 4.2113 37 1 -1.0596 -0.3008 2.5275 38 1 -0.4127 -1.8954 2.9827 39 1 1.2832 -2.7867 3.1968 40 1 2.1865 -3.1204 4.7367 41 1 3.7896 4.6446 0.0016 42 1 0.4711 4.8938 0.8908 43 1 -0.2815 5.6892 -1.2320 44 1 3.0971 6.3256 -1.2074 45 1 1.4367 7.5997 0.0332 46 1 0.2144 2.3195 0.0101 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_80432_17541816.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:51:07 Heat of formation + Delta-G solvation = -287.851684 kcal Electronic energy + Delta-G solvation = -44641.257263 eV Core-core repulsion = 38432.732697 eV Total energy + Delta-G solvation = -6208.524565 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 447.059 amu Computer time = 2.95 seconds Orbital eigenvalues (eV) -51.21564 -48.76461 -48.64743 -42.66722 -41.60205 -40.44394 -39.45558 -38.18992 -37.97600 -37.50918 -37.24745 -37.03277 -32.51202 -31.83783 -31.63234 -29.19299 -28.44203 -27.88000 -27.17131 -26.96105 -24.12273 -23.84168 -23.41077 -21.91520 -20.82733 -19.99065 -19.73747 -19.51504 -19.35918 -19.05270 -18.97119 -18.58715 -18.51799 -17.66520 -17.32508 -17.11468 -16.96670 -16.69416 -16.43463 -16.20773 -16.01701 -15.89829 -15.69504 -15.57370 -15.48610 -15.27495 -15.10739 -14.90739 -14.83749 -14.76835 -14.67842 -14.47582 -14.33925 -14.26288 -14.03764 -13.60457 -13.48071 -13.37510 -13.33534 -13.17573 -13.12019 -13.02357 -12.98881 -12.90425 -12.66520 -12.50377 -12.36810 -12.15059 -12.11581 -12.03311 -11.91857 -11.49178 -10.94644 -10.80020 -10.06463 -9.74298 -5.10187 -1.09886 -0.33537 -0.24420 0.68566 1.01945 1.03498 1.44746 1.48730 1.74558 1.80601 1.88286 1.93163 2.45692 2.55143 2.56137 2.75553 2.87416 2.91396 3.04593 3.21389 3.27204 3.28863 3.38743 3.43866 3.49323 3.66089 3.76255 3.79077 3.86017 3.89518 3.94888 4.02581 4.08678 4.13751 4.19440 4.25432 4.32512 4.35566 4.39399 4.45865 4.47556 4.51979 4.64401 4.72500 4.80341 4.88083 4.95378 5.49693 5.73395 6.16644 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.303 6.303 3 C 0.141 3.859 4 C 0.043 3.957 5 O -0.644 6.644 6 S 2.582 3.418 7 O -0.922 6.922 8 O -0.937 6.937 9 C -0.634 4.634 10 C -0.092 4.092 11 H 0.109 0.891 12 C -0.125 4.125 13 C 0.043 3.957 14 O -0.331 6.331 15 C 0.005 3.995 16 C 0.438 3.562 17 F -0.174 7.174 18 F -0.173 7.173 19 F -0.182 7.182 20 C -0.137 4.137 21 C 0.033 3.967 22 Cl -0.016 7.016 23 C -0.130 4.130 24 C 0.000 4.000 25 C -0.080 4.080 26 O -0.534 6.534 27 Si 0.680 3.320 28 C -0.161 4.161 29 H 0.067 0.933 30 H 0.110 0.890 31 H 0.066 0.934 32 H 0.154 0.846 33 H 0.147 0.853 34 H 0.124 0.876 35 H 0.110 0.890 36 H 0.056 0.944 37 H 0.098 0.902 38 H 0.058 0.942 39 H 0.098 0.902 40 H 0.113 0.887 41 H 0.154 0.846 42 H 0.090 0.910 43 H 0.386 0.614 44 H -0.247 1.247 45 H -0.253 1.253 46 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.824 1.592 0.676 7.039 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.216 6.216 3 C 0.093 3.907 4 C -0.001 4.001 5 O -0.602 6.602 6 S 2.677 3.323 7 O -0.920 6.920 8 O -0.935 6.935 9 C -0.760 4.760 10 C -0.112 4.112 11 H 0.127 0.873 12 C -0.162 4.162 13 C 0.001 3.999 14 O -0.249 6.249 15 C -0.090 4.090 16 C 0.383 3.617 17 F -0.155 7.155 18 F -0.154 7.154 19 F -0.163 7.163 20 C -0.175 4.175 21 C 0.003 3.997 22 Cl 0.014 6.986 23 C -0.149 4.149 24 C -0.001 4.001 25 C -0.190 4.190 26 O -0.342 6.342 27 Si 0.579 3.421 28 C -0.180 4.180 29 H 0.086 0.914 30 H 0.128 0.872 31 H 0.085 0.915 32 H 0.171 0.829 33 H 0.165 0.835 34 H 0.143 0.857 35 H 0.129 0.871 36 H 0.075 0.925 37 H 0.116 0.884 38 H 0.076 0.924 39 H 0.116 0.884 40 H 0.131 0.869 41 H 0.172 0.828 42 H 0.108 0.892 43 H 0.235 0.765 44 H -0.171 1.171 45 H -0.178 1.178 46 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -5.250 1.814 -0.120 5.556 hybrid contribution -2.179 -0.447 -0.149 2.229 sum -7.429 1.367 -0.269 7.558 Atomic orbital electron populations 1.23412 0.76711 1.05156 1.02529 1.86174 1.22866 1.24877 1.87706 1.18782 0.89431 0.86349 0.96164 1.16769 0.85778 0.81962 1.15584 1.85766 1.72132 1.44811 1.57533 1.06028 0.77016 0.75676 0.73590 1.93662 1.55334 1.60570 1.82439 1.93673 1.82569 1.45547 1.71754 1.30824 1.24554 1.14987 1.05626 1.21742 1.00761 0.97987 0.90687 0.87281 1.23530 0.89147 1.02543 1.01002 1.23973 0.93450 0.97482 0.85019 1.88041 1.29416 1.46419 1.60988 1.23225 0.84350 0.99404 1.02044 1.21147 0.76650 0.74062 0.89826 1.93190 1.64018 1.87553 1.70745 1.93225 1.91114 1.39158 1.91952 1.93187 1.54615 1.71625 1.96903 1.23581 0.97317 0.94589 1.02041 1.20595 0.87513 0.92024 0.99542 1.98447 1.05895 1.98340 1.95930 1.20735 0.92604 0.97386 1.04131 1.19137 0.92162 0.94059 0.94791 1.24807 0.99726 1.03319 0.91100 1.86559 1.57897 1.47134 1.42606 0.94848 0.82457 0.75380 0.89376 1.21061 1.01216 0.89968 1.05750 0.91422 0.87171 0.91505 0.82855 0.83531 0.85746 0.87125 0.92512 0.88394 0.92352 0.88397 0.86862 0.82842 0.89225 0.76520 1.17100 1.17763 0.82850 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.74 101.05 0.98 0.91 16 2 O -0.30 0.41 7.49 -34.24 -0.26 0.16 16 3 C 0.14 0.04 5.83 -39.13 -0.23 -0.19 16 4 C 0.04 0.11 4.80 -39.10 -0.19 -0.08 16 5 O -0.64 -2.29 9.30 -54.30 -0.51 -2.79 16 6 S 2.58 7.71 5.14 -107.50 -0.55 7.16 16 7 O -0.92 -5.67 18.09 -67.03 -1.21 -6.88 16 8 O -0.94 -3.64 14.98 -67.03 -1.00 -4.64 16 9 C -0.63 0.55 4.11 37.16 0.15 0.70 16 10 C -0.09 0.15 3.83 -89.81 -0.34 -0.19 16 11 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 12 C -0.13 0.16 6.93 -25.78 -0.18 -0.02 16 13 C 0.04 -0.05 0.82 -89.67 -0.07 -0.12 16 14 O -0.33 0.48 8.41 -35.23 -0.30 0.19 16 15 C 0.01 -0.02 10.23 101.05 1.03 1.01 16 16 C 0.44 0.13 2.56 37.16 0.10 0.23 16 17 F -0.17 -0.10 15.77 2.25 0.04 -0.07 16 18 F -0.17 -0.32 17.16 2.25 0.04 -0.28 16 19 F -0.18 -0.08 15.25 2.25 0.03 -0.05 16 20 C -0.14 0.37 6.54 -25.92 -0.17 0.20 16 21 C 0.03 0.08 5.66 -39.39 -0.22 -0.14 16 22 Cl -0.02 -0.05 27.25 -51.86 -1.41 -1.47 16 23 C -0.13 -0.04 8.45 -39.54 -0.33 -0.37 16 24 C 0.00 0.00 5.42 -104.62 -0.57 -0.57 16 25 C -0.08 0.20 2.81 36.00 0.10 0.30 16 26 O -0.53 0.91 12.74 -35.23 -0.45 0.46 16 27 Si 0.68 -1.65 29.78 -169.99 -5.06 -6.71 16 28 C -0.16 0.17 8.60 -39.45 -0.34 -0.17 16 29 H 0.07 -0.34 7.67 -51.93 -0.40 -0.74 16 30 H 0.11 -0.72 8.14 -51.93 -0.42 -1.15 16 31 H 0.07 -0.40 6.02 -51.93 -0.31 -0.71 16 32 H 0.15 -0.22 3.95 -51.93 -0.21 -0.43 16 33 H 0.15 -0.40 8.10 -51.93 -0.42 -0.82 16 34 H 0.12 -0.31 7.11 -51.92 -0.37 -0.68 16 35 H 0.11 -0.09 7.91 -51.93 -0.41 -0.50 16 36 H 0.06 -0.15 6.65 -51.93 -0.35 -0.49 16 37 H 0.10 -0.55 6.42 -51.92 -0.33 -0.89 16 38 H 0.06 -0.27 6.50 -51.93 -0.34 -0.61 16 39 H 0.10 -0.38 6.62 -51.93 -0.34 -0.72 16 40 H 0.11 -0.41 7.93 -51.93 -0.41 -0.82 16 41 H 0.15 -0.25 4.87 -52.49 -0.26 -0.50 16 42 H 0.09 -0.42 7.96 -51.93 -0.41 -0.83 16 43 H 0.39 -2.12 8.74 45.56 0.40 -1.72 16 44 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 45 H -0.25 0.17 7.11 56.52 0.40 0.57 16 46 H 0.15 -0.51 6.30 -52.49 -0.33 -0.84 16 LS Contribution 400.96 15.07 6.04 6.04 Total: 0.00 -10.34 400.96 -9.41 -19.75 By element: Atomic # 1 Polarization: -7.82 SS G_CDS: -4.53 Total: -12.35 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: -0.28 Total: 1.49 kcal Atomic # 8 Polarization: -9.79 SS G_CDS: -3.72 Total: -13.52 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.11 Total: -0.39 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.06 Total: -6.71 kcal Atomic # 16 Polarization: 7.71 SS G_CDS: -0.55 Total: 7.16 kcal Atomic # 17 Polarization: -0.05 SS G_CDS: -1.41 Total: -1.47 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -10.34 -9.41 -19.75 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_80432_17541816.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -268.098 kcal (2) G-P(sol) polarization free energy of solvation -10.341 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -278.439 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.412 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.753 kcal (6) G-S(sol) free energy of system = (1) + (5) -287.852 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.95 seconds