Wall clock time and date at job start Mon Mar 8 2021 13:42:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45194 * 109.47620 * 2 1 4 4 C 1.34226 * 117.00475 * 180.02562 * 3 2 1 5 5 O 1.20835 * 119.99726 * 0.02562 * 4 3 2 6 6 C 1.50701 * 120.00625 * 179.97438 * 4 3 2 7 7 H 1.09001 * 112.84358 * 48.80221 * 6 4 3 8 8 C 1.53780 * 113.61699 * 179.97438 * 6 4 3 9 9 C 1.53782 * 87.08185 * 89.20191 * 8 6 4 10 10 F 1.39901 * 113.61060 * 270.80213 * 9 8 6 11 11 C 1.52994 * 113.61482 * 139.98003 * 9 8 6 12 12 S 1.81404 * 109.47193 * 185.00150 * 11 9 8 13 13 O 1.42094 * 110.54199 * 68.37257 * 12 11 9 14 14 O 1.42108 * 110.53692 * 291.62571 * 12 11 9 15 15 O 1.52196 * 104.45031 * 180.02562 * 12 11 9 16 16 C 1.35917 * 114.00086 * 74.99684 * 15 12 11 17 17 C 1.38797 * 120.05906 * 90.00094 * 16 15 12 18 18 Br 1.89097 * 120.03289 * 359.95398 * 17 16 15 19 19 C 1.38236 * 119.92791 * 179.97438 * 17 16 15 20 20 C 1.38244 * 120.04782 * 0.02562 * 19 17 16 21 21 C 1.50699 * 119.94230 * 179.97438 * 20 19 17 22 22 O 1.42901 * 109.46830 * 299.99955 * 21 20 19 23 23 Si 1.86298 * 109.46950 * 180.02562 * 21 20 19 24 24 C 1.38284 * 120.11340 * 0.27228 * 20 19 17 25 25 C 1.38143 * 120.07691 * 359.45412 * 24 20 19 26 26 C 1.53777 * 113.68873 * 277.53976 * 6 4 3 27 27 H 1.08992 * 109.47360 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.46861 * 300.00333 * 1 2 3 29 29 H 1.09001 * 109.46872 * 59.99550 * 1 2 3 30 30 H 1.09006 * 109.46752 * 240.00012 * 2 1 3 31 31 H 1.09001 * 109.46872 * 120.00450 * 2 1 3 32 32 H 1.09001 * 113.61497 * 334.64874 * 8 6 4 33 33 H 1.09001 * 113.61188 * 203.75129 * 8 6 4 34 34 H 1.09001 * 109.47045 * 64.99901 * 11 9 8 35 35 H 1.09002 * 109.47322 * 305.00015 * 11 9 8 36 36 H 1.08000 * 119.97769 * 179.97438 * 19 17 16 37 37 H 1.08991 * 109.47351 * 60.00102 * 21 20 19 38 38 H 0.96708 * 114.00246 * 299.99864 * 22 21 20 39 39 H 1.48506 * 109.99834 * 180.02562 * 23 21 20 40 40 H 1.48502 * 110.00011 * 301.31529 * 23 21 20 41 41 H 1.08008 * 119.96021 * 179.72516 * 24 20 19 42 42 H 1.07997 * 120.02390 * 180.25345 * 25 24 20 43 43 H 1.08996 * 113.61260 * 156.32418 * 26 6 4 44 44 H 1.09000 * 113.61688 * 25.41679 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5447 -0.0005 5 8 4.0808 0.5864 -0.0015 6 6 3.9210 2.9372 -0.0012 7 1 3.4717 3.5814 0.7547 8 6 5.4585 2.9678 -0.0011 9 6 5.3807 2.9442 -1.5368 10 9 5.3599 1.6538 -2.0769 11 6 6.4037 3.8564 -2.2164 12 16 6.1179 3.8566 -4.0077 13 8 4.8918 4.5046 -4.3170 14 8 6.4368 2.5882 -4.5635 15 8 7.1859 4.7882 -4.5626 16 6 8.4329 4.2479 -4.5861 17 6 8.8662 3.5476 -5.7034 18 35 7.7217 3.3429 -7.1947 19 6 10.1352 2.9997 -5.7246 20 6 10.9717 3.1484 -4.6340 21 6 12.3544 2.5496 -4.6594 22 8 12.2573 1.1342 -4.8306 23 14 13.2220 2.9224 -3.0535 24 6 10.5396 3.8405 -3.5175 25 6 9.2745 4.3949 -3.4932 26 6 3.9859 3.5784 -1.3974 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 1.8933 -0.5139 -0.8901 31 1 1.8933 -0.5139 0.8900 32 1 5.9129 2.0743 0.4270 33 1 5.8768 3.8907 0.4008 34 1 7.4098 3.4920 -2.0089 35 1 6.2982 4.8708 -1.8316 36 1 10.4730 2.4543 -6.5933 37 1 12.9205 2.9777 -5.4866 38 1 11.7651 0.6860 -4.1291 39 1 14.5871 2.3377 -3.0662 40 1 13.3010 4.3910 -2.8479 41 1 11.1936 3.9514 -2.6651 42 1 8.9395 4.9387 -2.6224 43 1 4.0019 4.6680 -1.3771 44 1 3.2519 3.1777 -2.0965 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_80522_15494190.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:42:09 Heat of formation + Delta-G solvation = -189.452216 kcal Electronic energy + Delta-G solvation = -35802.187001 eV Core-core repulsion = 30584.130576 eV Total energy + Delta-G solvation = -5218.056425 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 453.011 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -49.10052 -42.47372 -41.83051 -40.02914 -39.28246 -38.49718 -37.51521 -37.47858 -37.34179 -33.86678 -32.84468 -32.43666 -31.81618 -30.69439 -27.19824 -27.12645 -26.71756 -24.41744 -23.95012 -23.56813 -22.60398 -21.68790 -20.66407 -19.74494 -19.12257 -19.03985 -18.68171 -18.39783 -17.85423 -17.48825 -17.26488 -17.17705 -16.70947 -16.63513 -16.39347 -16.08933 -16.02587 -15.62664 -15.18871 -15.02526 -14.74806 -14.67335 -14.55704 -14.48988 -14.43135 -14.07023 -13.75580 -13.73887 -13.69472 -13.49916 -13.42078 -13.29787 -13.21095 -12.96828 -12.80421 -12.62611 -12.53835 -12.39748 -12.20790 -12.05250 -11.93941 -11.64139 -11.59398 -11.57519 -11.52165 -11.34782 -10.57659 -10.24254 -10.02218 -4.96764 -1.36666 -0.39428 -0.21598 0.25825 0.82942 1.03397 1.28777 1.56669 1.66617 2.01402 2.05430 2.32303 2.67859 2.75397 2.83121 3.01362 3.22541 3.25782 3.29999 3.40716 3.47295 3.59004 3.69067 3.84102 3.89777 3.93570 3.97489 4.00984 4.20403 4.27747 4.28774 4.39962 4.42698 4.55437 4.57252 4.60235 4.63623 4.65595 4.77586 4.79086 4.86209 4.87147 4.97552 5.06726 5.11387 5.35620 5.41613 6.62991 6.73351 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.054 3.946 3 O -0.361 6.361 4 C 0.462 3.538 5 O -0.525 6.525 6 C -0.114 4.114 7 H 0.167 0.833 8 C -0.105 4.105 9 C 0.069 3.931 10 F -0.198 7.198 11 C -0.646 4.646 12 S 2.563 3.437 13 O -0.952 6.952 14 O -0.961 6.961 15 O -0.660 6.660 16 C 0.068 3.932 17 C -0.093 4.093 18 Br -0.044 7.044 19 C -0.061 4.061 20 C -0.092 4.092 21 C -0.087 4.087 22 O -0.555 6.555 23 Si 0.791 3.209 24 C -0.076 4.076 25 C -0.106 4.106 26 C -0.155 4.155 27 H 0.096 0.904 28 H 0.073 0.927 29 H 0.065 0.935 30 H 0.060 0.940 31 H 0.072 0.928 32 H 0.090 0.910 33 H 0.175 0.825 34 H 0.185 0.815 35 H 0.216 0.784 36 H 0.147 0.853 37 H 0.116 0.884 38 H 0.398 0.602 39 H -0.305 1.305 40 H -0.263 1.263 41 H 0.189 0.811 42 H 0.206 0.794 43 H 0.168 0.832 44 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.167 5.071 10.986 12.507 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.278 6.278 4 C 0.306 3.694 5 O -0.414 6.414 6 C -0.133 4.133 7 H 0.185 0.815 8 C -0.143 4.143 9 C 0.049 3.951 10 F -0.178 7.178 11 C -0.776 4.776 12 S 2.663 3.337 13 O -0.950 6.950 14 O -0.959 6.959 15 O -0.618 6.618 16 C 0.024 3.976 17 C -0.175 4.175 18 Br 0.042 6.958 19 C -0.081 4.081 20 C -0.094 4.094 21 C -0.195 4.195 22 O -0.363 6.363 23 Si 0.695 3.305 24 C -0.094 4.094 25 C -0.126 4.126 26 C -0.192 4.192 27 H 0.115 0.885 28 H 0.092 0.908 29 H 0.085 0.915 30 H 0.079 0.921 31 H 0.091 0.909 32 H 0.109 0.891 33 H 0.192 0.808 34 H 0.203 0.797 35 H 0.233 0.767 36 H 0.165 0.835 37 H 0.133 0.867 38 H 0.248 0.752 39 H -0.233 1.233 40 H -0.189 1.189 41 H 0.205 0.795 42 H 0.222 0.778 43 H 0.185 0.815 44 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 3.534 5.210 9.478 11.378 hybrid contribution -0.192 -0.606 -0.870 1.078 sum 3.342 4.604 8.608 10.318 Atomic orbital electron populations 1.21827 0.90574 1.04302 1.03800 1.23251 0.97011 0.79348 1.02376 1.86488 1.24243 1.33451 1.83596 1.23843 0.80756 0.93089 0.71725 1.90695 1.60970 1.44085 1.45642 1.22186 0.98840 0.90119 1.02120 0.81550 1.23710 0.92524 1.08207 0.89871 1.21991 0.96668 0.78405 0.97995 1.92992 1.97305 1.40227 1.87303 1.31250 1.11129 1.12668 1.22524 1.06285 0.74338 0.73411 0.79654 1.93616 1.42446 1.75094 1.83820 1.93695 1.82223 1.44458 1.75538 1.85762 1.27918 1.62211 1.85955 1.18163 0.82661 0.99995 0.96769 1.22350 0.97200 1.03748 0.94172 1.96827 1.64348 1.96778 1.37819 1.21079 0.90016 0.96647 1.00346 1.20835 0.97235 0.97827 0.93498 1.25529 0.95460 0.84232 1.14291 1.86522 1.78728 1.16954 1.54138 0.93739 0.78601 0.79333 0.78845 1.21506 0.95207 0.94493 0.98164 1.21881 0.93390 0.99599 0.97691 1.24084 0.94292 1.05338 0.95472 0.88549 0.90784 0.91548 0.92140 0.90921 0.89088 0.80784 0.79733 0.76703 0.83511 0.86681 0.75165 1.23326 1.18890 0.79486 0.77751 0.81458 0.90603 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.29 10.29 71.98 0.74 1.03 16 2 C 0.05 0.16 6.19 71.98 0.45 0.61 16 3 O -0.36 -1.79 10.22 -51.38 -0.53 -2.32 16 4 C 0.46 2.32 6.93 71.24 0.49 2.81 16 5 O -0.53 -6.06 14.48 21.94 0.32 -5.74 16 6 C -0.11 0.57 4.45 -11.02 -0.05 0.52 16 7 H 0.17 -2.06 8.14 -2.39 -0.02 -2.08 16 8 C -0.11 0.92 6.93 31.12 0.22 1.14 16 9 C 0.07 -0.17 1.56 -10.25 -0.02 -0.18 16 10 F -0.20 -1.76 14.83 44.97 0.67 -1.09 16 11 C -0.65 5.62 5.12 71.98 0.37 5.99 16 12 S 2.56 12.90 4.85 -56.49 -0.27 12.63 16 13 O -0.95 -10.83 17.96 -118.57 -2.13 -12.96 16 14 O -0.96 -11.60 14.48 -118.57 -1.72 -13.31 16 15 O -0.66 -2.29 9.41 -61.71 -0.58 -2.87 16 16 C 0.07 0.08 4.79 22.52 0.11 0.19 16 17 C -0.09 -0.51 5.58 22.40 0.13 -0.38 16 18 Br -0.04 -0.47 31.63 -20.37 -0.64 -1.12 16 19 C -0.06 -0.07 9.35 22.27 0.21 0.14 16 20 C -0.09 0.46 5.39 -19.85 -0.11 0.35 16 21 C -0.09 0.50 2.82 71.24 0.20 0.71 16 22 O -0.56 1.77 12.77 -148.98 -1.90 -0.13 16 23 Si 0.79 -7.35 29.78 68.60 2.04 -5.31 16 24 C -0.08 0.79 8.66 22.26 0.19 0.98 16 25 C -0.11 0.96 8.46 22.36 0.19 1.14 16 26 C -0.15 0.65 6.94 31.14 0.22 0.87 16 27 H 0.10 -0.47 8.14 -2.39 -0.02 -0.49 16 28 H 0.07 -0.22 8.14 -2.39 -0.02 -0.23 16 29 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 30 H 0.06 0.30 8.13 -2.38 -0.02 0.28 16 31 H 0.07 0.18 8.13 -2.39 -0.02 0.16 16 32 H 0.09 -0.41 7.43 -2.39 -0.02 -0.43 16 33 H 0.17 -3.40 8.10 -2.39 -0.02 -3.42 16 34 H 0.19 -2.81 6.60 -2.39 -0.02 -2.82 16 35 H 0.22 -4.26 8.05 -2.39 -0.02 -4.28 16 36 H 0.15 0.20 8.06 -2.91 -0.02 0.18 16 37 H 0.12 -0.54 7.96 -2.39 -0.02 -0.56 16 38 H 0.40 -4.42 8.70 -74.05 -0.64 -5.06 16 39 H -0.30 -0.07 7.11 99.48 0.71 0.63 16 40 H -0.26 1.91 7.11 99.48 0.71 2.61 16 41 H 0.19 -3.37 4.87 -2.91 -0.01 -3.38 16 42 H 0.21 -4.04 7.49 -2.91 -0.02 -4.06 16 43 H 0.17 -2.09 8.04 -2.39 -0.02 -2.11 16 44 H 0.08 0.09 8.10 -2.39 -0.02 0.07 16 Total: 0.00 -40.46 400.32 -0.95 -41.41 By element: Atomic # 1 Polarization: -25.56 SS G_CDS: 0.46 Total: -25.09 kcal Atomic # 6 Polarization: 12.58 SS G_CDS: 3.33 Total: 15.91 kcal Atomic # 8 Polarization: -30.80 SS G_CDS: -6.54 Total: -37.34 kcal Atomic # 9 Polarization: -1.76 SS G_CDS: 0.67 Total: -1.09 kcal Atomic # 14 Polarization: -7.35 SS G_CDS: 2.04 Total: -5.31 kcal Atomic # 16 Polarization: 12.90 SS G_CDS: -0.27 Total: 12.63 kcal Atomic # 35 Polarization: -0.47 SS G_CDS: -0.64 Total: -1.12 kcal Total: -40.46 -0.95 -41.41 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_80522_15494190.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -148.042 kcal (2) G-P(sol) polarization free energy of solvation -40.463 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -188.504 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.948 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.411 kcal (6) G-S(sol) free energy of system = (1) + (5) -189.452 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds