Wall clock time and date at job start Mon Mar 8 2021 14:03:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.45196 * 109.47387 * 2 1 4 4 C 1.34232 * 117.00255 * 180.02562 * 3 2 1 5 5 O 1.20826 * 119.99440 * 0.02562 * 4 3 2 6 6 C 1.50699 * 120.00301 * 179.97438 * 4 3 2 7 7 H 1.09005 * 112.84357 * 48.80562 * 6 4 3 8 8 C 1.53781 * 113.61377 * 179.97438 * 6 4 3 9 9 C 1.53787 * 87.07934 * 139.98462 * 8 6 4 10 10 F 1.39892 * 113.61325 * 89.19765 * 9 8 6 11 11 C 1.52997 * 113.61548 * 220.02408 * 9 8 6 12 12 S 1.81396 * 109.47317 * 179.97438 * 11 9 8 13 13 O 1.42100 * 110.54450 * 68.36978 * 12 11 9 14 14 O 1.42098 * 110.54210 * 291.61996 * 12 11 9 15 15 O 1.52201 * 104.45116 * 179.97438 * 12 11 9 16 16 C 1.35909 * 114.00031 * 74.99685 * 15 12 11 17 17 C 1.38798 * 120.05723 * 90.00182 * 16 15 12 18 18 Br 1.89097 * 120.03518 * 0.04493 * 17 16 15 19 19 C 1.38232 * 119.92934 * 180.02562 * 17 16 15 20 20 C 1.38248 * 120.04418 * 359.97438 * 19 17 16 21 21 C 1.50693 * 119.94191 * 179.97438 * 20 19 17 22 22 O 1.42907 * 109.47661 * 300.00763 * 21 20 19 23 23 Si 1.86298 * 109.47618 * 180.02562 * 21 20 19 24 24 C 1.38285 * 120.12000 * 0.26272 * 20 19 17 25 25 C 1.38147 * 120.06930 * 359.48249 * 24 20 19 26 26 C 1.53779 * 113.61490 * 277.50020 * 6 4 3 27 27 H 1.08995 * 109.47150 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.46469 * 300.00227 * 1 2 3 29 29 H 1.09006 * 109.47043 * 59.99761 * 1 2 3 30 30 H 1.08999 * 109.47060 * 240.00177 * 2 1 3 31 31 H 1.08997 * 109.47246 * 120.00385 * 2 1 3 32 32 H 1.08998 * 113.61482 * 25.44020 * 8 6 4 33 33 H 1.08997 * 113.61526 * 254.53321 * 8 6 4 34 34 H 1.09000 * 109.47422 * 59.99588 * 11 9 8 35 35 H 1.09007 * 109.46760 * 299.99629 * 11 9 8 36 36 H 1.07996 * 119.97973 * 180.02562 * 19 17 16 37 37 H 1.09000 * 109.46936 * 60.00386 * 21 20 19 38 38 H 0.96697 * 114.00527 * 179.97438 * 22 21 20 39 39 H 1.48506 * 109.99834 * 298.68714 * 23 21 20 40 40 H 1.48502 * 110.00011 * 59.99978 * 23 21 20 41 41 H 1.07993 * 119.96394 * 179.74210 * 24 20 19 42 42 H 1.08000 * 120.02340 * 180.26314 * 25 24 20 43 43 H 1.08998 * 113.61395 * 105.47284 * 26 6 4 44 44 H 1.09003 * 113.61433 * 334.56360 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0808 0.5865 -0.0015 6 6 3.9209 2.9373 -0.0012 7 1 3.4716 3.5815 0.7547 8 6 5.4584 2.9679 -0.0011 9 6 5.3567 4.1419 -0.9892 10 9 5.2853 5.3930 -0.3674 11 6 6.3988 4.0931 -2.1083 12 16 6.1775 5.5222 -3.2034 13 8 6.5225 6.7248 -2.5297 14 8 4.9600 5.4116 -3.9277 15 8 7.2600 5.3613 -4.2612 16 6 6.9954 4.3959 -5.1806 17 6 6.3049 4.7127 -6.3422 18 35 5.7320 6.4886 -6.6484 19 6 6.0367 3.7286 -7.2752 20 6 6.4563 2.4304 -7.0519 21 6 6.1622 1.3593 -8.0703 22 8 4.7486 1.2412 -8.2431 23 14 6.8528 -0.2667 -7.4787 24 6 7.1401 2.1117 -5.8930 25 6 7.4153 3.0924 -4.9598 26 6 3.9859 3.5764 -1.3983 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3632 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 1.8934 -0.5138 -0.8900 31 1 1.8934 -0.5139 0.8899 32 1 5.9129 2.0747 -0.4297 33 1 5.8896 3.2433 0.9613 34 1 6.2742 3.1742 -2.6811 35 1 7.3987 4.1184 -1.6750 36 1 5.4999 3.9742 -8.1795 37 1 6.6234 1.6257 -9.0213 38 1 4.4856 0.5688 -8.8863 39 1 8.3266 -0.1669 -7.3253 40 1 6.2316 -0.6410 -6.1829 41 1 7.4630 1.0959 -5.7193 42 1 7.9531 2.8435 -4.0569 43 1 3.2289 4.3430 -1.5634 44 1 4.0378 2.8496 -2.2090 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_80522_16464788.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:03:38 Heat of formation + Delta-G solvation = -188.255408 kcal Electronic energy + Delta-G solvation = -35839.958706 eV Core-core repulsion = 30621.954179 eV Total energy + Delta-G solvation = -5218.004527 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 453.011 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -49.30813 -42.60512 -41.90962 -40.07018 -39.41630 -38.60190 -37.60165 -37.51846 -37.42806 -34.01031 -32.91167 -32.61240 -31.96464 -30.81285 -27.37547 -27.19954 -26.98507 -24.53836 -23.98430 -23.54660 -22.37351 -21.73710 -20.94611 -19.91089 -19.32942 -19.14649 -18.82586 -18.38737 -17.88507 -17.71119 -17.54071 -17.43128 -17.00555 -16.68250 -16.36807 -16.26043 -15.96979 -15.60247 -15.43322 -15.04899 -14.78778 -14.71457 -14.68237 -14.57898 -14.45609 -14.12654 -13.92354 -13.79933 -13.73141 -13.71297 -13.57824 -13.44597 -13.14442 -13.02696 -12.99756 -12.72153 -12.57841 -12.52224 -12.44374 -12.14953 -12.01467 -11.95342 -11.63792 -11.60862 -11.56656 -11.48149 -10.56279 -10.26768 -10.08930 -4.90088 -1.48859 -0.54783 -0.36297 0.15350 0.68275 0.93364 1.27706 1.50688 1.68203 1.87745 1.94865 2.20706 2.51011 2.60802 2.66414 2.77338 3.09594 3.10294 3.16028 3.16454 3.30940 3.52270 3.62538 3.71000 3.75762 3.94198 3.94381 4.00030 4.00213 4.08472 4.23582 4.27638 4.29265 4.33859 4.36067 4.47498 4.50450 4.56892 4.61853 4.67886 4.78514 4.83914 4.86654 4.95263 5.09511 5.18630 5.36340 6.54522 6.88409 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.053 3.947 3 O -0.361 6.361 4 C 0.477 3.523 5 O -0.528 6.528 6 C -0.110 4.110 7 H 0.150 0.850 8 C -0.112 4.112 9 C 0.092 3.908 10 F -0.187 7.187 11 C -0.659 4.659 12 S 2.576 3.424 13 O -0.948 6.948 14 O -0.947 6.947 15 O -0.659 6.659 16 C 0.069 3.931 17 C -0.085 4.085 18 Br -0.029 7.029 19 C -0.051 4.051 20 C -0.055 4.055 21 C -0.087 4.087 22 O -0.562 6.562 23 Si 0.768 3.232 24 C -0.098 4.098 25 C -0.109 4.109 26 C -0.148 4.148 27 H 0.098 0.902 28 H 0.067 0.933 29 H 0.067 0.933 30 H 0.072 0.928 31 H 0.071 0.929 32 H 0.131 0.869 33 H 0.113 0.887 34 H 0.186 0.814 35 H 0.190 0.810 36 H 0.162 0.838 37 H 0.107 0.893 38 H 0.408 0.592 39 H -0.274 1.274 40 H -0.284 1.284 41 H 0.158 0.842 42 H 0.193 0.807 43 H 0.109 0.891 44 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.193 -10.960 -4.082 11.697 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.321 3.679 5 O -0.417 6.417 6 C -0.128 4.128 7 H 0.168 0.832 8 C -0.151 4.151 9 C 0.072 3.928 10 F -0.167 7.167 11 C -0.787 4.787 12 S 2.674 3.326 13 O -0.947 6.947 14 O -0.946 6.946 15 O -0.618 6.618 16 C 0.026 3.974 17 C -0.167 4.167 18 Br 0.057 6.943 19 C -0.071 4.071 20 C -0.057 4.057 21 C -0.197 4.197 22 O -0.373 6.373 23 Si 0.671 3.329 24 C -0.116 4.116 25 C -0.129 4.129 26 C -0.186 4.186 27 H 0.116 0.884 28 H 0.086 0.914 29 H 0.086 0.914 30 H 0.090 0.910 31 H 0.089 0.911 32 H 0.149 0.851 33 H 0.132 0.868 34 H 0.204 0.796 35 H 0.207 0.793 36 H 0.180 0.820 37 H 0.125 0.875 38 H 0.260 0.740 39 H -0.201 1.201 40 H -0.211 1.211 41 H 0.175 0.825 42 H 0.210 0.790 43 H 0.128 0.872 44 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 0.505 -9.722 -3.392 10.309 hybrid contribution 0.276 0.324 0.664 0.789 sum 0.781 -9.398 -2.728 9.817 Atomic orbital electron populations 1.21843 0.90879 1.04328 1.03685 1.23302 0.96848 0.79043 1.02788 1.86533 1.24106 1.33847 1.83243 1.23571 0.80724 0.92243 0.71333 1.90666 1.60980 1.43660 1.46441 1.22588 0.97747 0.91076 1.01439 0.83223 1.23616 0.93332 0.97117 1.01000 1.21402 0.96035 0.81891 0.93475 1.92987 1.97115 1.42724 1.83921 1.31295 1.11420 1.23249 1.12730 1.05979 0.73707 0.77390 0.75477 1.93636 1.82670 1.43331 1.75024 1.93692 1.46229 1.87175 1.67490 1.85776 1.67246 1.59820 1.48927 1.17993 1.03414 0.86617 0.89418 1.22365 1.02667 0.94049 0.97628 1.96846 1.88959 1.12719 1.95743 1.21160 0.96717 0.90540 0.98683 1.20057 0.96091 0.94208 0.95331 1.24970 0.87978 1.05665 1.01051 1.86448 1.19111 1.64253 1.67457 0.93746 0.76864 0.79512 0.82762 1.21221 0.97924 0.99933 0.92475 1.21664 0.99478 0.88488 1.03258 1.23892 0.95846 1.02019 0.96838 0.88383 0.91365 0.91354 0.90995 0.91069 0.85115 0.86826 0.79640 0.79256 0.82019 0.87503 0.73996 1.20060 1.21078 0.82474 0.78993 0.87230 0.85572 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.58 10.29 71.98 0.74 1.32 16 2 C 0.05 0.00 6.19 71.98 0.45 0.44 16 3 O -0.36 -1.06 10.22 -51.43 -0.53 -1.58 16 4 C 0.48 1.30 7.48 71.24 0.53 1.84 16 5 O -0.53 -3.74 15.65 21.96 0.34 -3.40 16 6 C -0.11 0.20 4.24 -11.01 -0.05 0.15 16 7 H 0.15 -0.66 8.14 -2.38 -0.02 -0.68 16 8 C -0.11 0.44 6.86 31.12 0.21 0.65 16 9 C 0.09 -0.07 1.62 -10.25 -0.02 -0.08 16 10 F -0.19 -1.02 16.28 44.97 0.73 -0.28 16 11 C -0.66 2.45 5.17 71.98 0.37 2.82 16 12 S 2.58 18.37 4.82 -56.49 -0.27 18.10 16 13 O -0.95 -14.67 17.54 -118.57 -2.08 -16.75 16 14 O -0.95 -9.65 14.94 -118.57 -1.77 -11.42 16 15 O -0.66 -4.11 9.41 -61.62 -0.58 -4.69 16 16 C 0.07 0.27 4.79 22.52 0.11 0.38 16 17 C -0.08 -0.52 5.58 22.40 0.12 -0.40 16 18 Br -0.03 -0.28 31.64 -20.37 -0.64 -0.92 16 19 C -0.05 -0.10 9.35 22.27 0.21 0.11 16 20 C -0.05 0.08 5.42 -19.85 -0.11 -0.03 16 21 C -0.09 0.62 2.81 71.23 0.20 0.82 16 22 O -0.56 3.29 12.74 -148.98 -1.90 1.40 16 23 Si 0.77 -6.91 29.78 68.60 2.04 -4.86 16 24 C -0.10 0.32 8.66 22.26 0.19 0.51 16 25 C -0.11 0.36 8.46 22.36 0.19 0.55 16 26 C -0.15 0.23 7.08 31.13 0.22 0.45 16 27 H 0.10 -0.69 8.14 -2.39 -0.02 -0.70 16 28 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 29 H 0.07 -0.24 8.14 -2.38 -0.02 -0.25 16 30 H 0.07 -0.02 8.13 -2.39 -0.02 -0.04 16 31 H 0.07 -0.01 8.13 -2.39 -0.02 -0.03 16 32 H 0.13 -0.73 7.39 -2.39 -0.02 -0.75 16 33 H 0.11 -0.65 8.14 -2.39 -0.02 -0.67 16 34 H 0.19 -1.93 6.41 -2.39 -0.02 -1.94 16 35 H 0.19 -1.90 8.14 -2.39 -0.02 -1.92 16 36 H 0.16 -0.06 8.06 -2.91 -0.02 -0.08 16 37 H 0.11 -1.20 7.96 -2.39 -0.02 -1.22 16 38 H 0.41 -6.50 8.74 -74.06 -0.65 -7.15 16 39 H -0.27 1.33 7.11 99.48 0.71 2.04 16 40 H -0.28 0.74 7.11 99.48 0.71 1.44 16 41 H 0.16 -1.08 4.87 -2.91 -0.01 -1.10 16 42 H 0.19 -2.30 7.50 -2.91 -0.02 -2.32 16 43 H 0.11 -0.13 8.14 -2.39 -0.02 -0.15 16 44 H 0.13 -0.52 7.92 -2.39 -0.02 -0.54 16 Total: 0.00 -30.40 403.35 -0.81 -31.21 By element: Atomic # 1 Polarization: -16.79 SS G_CDS: 0.46 Total: -16.33 kcal Atomic # 6 Polarization: 6.16 SS G_CDS: 3.38 Total: 9.53 kcal Atomic # 8 Polarization: -29.94 SS G_CDS: -6.51 Total: -36.45 kcal Atomic # 9 Polarization: -1.02 SS G_CDS: 0.73 Total: -0.28 kcal Atomic # 14 Polarization: -6.91 SS G_CDS: 2.04 Total: -4.86 kcal Atomic # 16 Polarization: 18.37 SS G_CDS: -0.27 Total: 18.10 kcal Atomic # 35 Polarization: -0.28 SS G_CDS: -0.64 Total: -0.92 kcal Total: -30.40 -0.81 -31.21 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_80522_16464788.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -157.043 kcal (2) G-P(sol) polarization free energy of solvation -30.400 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -187.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.812 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.212 kcal (6) G-S(sol) free energy of system = (1) + (5) -188.255 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds