Wall clock time and date at job start Mon Mar 8 2021 13:23:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 O 1.45201 * 109.47606 * 2 1 4 4 C 1.34226 * 117.00410 * 180.02562 * 3 2 1 5 5 O 1.20829 * 119.99472 * 359.97438 * 4 3 2 6 6 C 1.50700 * 120.00116 * 180.02562 * 4 3 2 7 7 H 1.09000 * 112.90426 * 311.25152 * 6 4 3 8 8 C 1.53781 * 113.61508 * 82.50067 * 6 4 3 9 9 C 1.53780 * 87.08069 * 139.98006 * 8 6 4 10 10 F 1.39904 * 113.68996 * 220.01006 * 9 8 6 11 11 C 1.52998 * 113.61158 * 89.11524 * 9 8 6 12 12 S 1.81399 * 109.46963 * 82.50464 * 11 9 8 13 13 O 1.42101 * 110.54618 * 68.37727 * 12 11 9 14 14 O 1.42101 * 110.54476 * 291.62258 * 12 11 9 15 15 O 1.52199 * 104.44894 * 179.97438 * 12 11 9 16 16 C 1.35984 * 114.00339 * 74.51392 * 15 12 11 17 17 C 1.38675 * 120.00106 * 259.98151 * 16 15 12 18 18 C 1.50693 * 119.99839 * 0.03819 * 17 16 15 19 19 O 1.42903 * 109.47309 * 285.33656 * 18 17 16 20 20 Si 1.86306 * 109.47112 * 165.33834 * 18 17 16 21 21 C 1.38152 * 119.99820 * 180.02562 * 17 16 15 22 22 C 1.38678 * 120.00083 * 359.97438 * 21 17 16 23 23 O 1.35984 * 120.00050 * 180.02562 * 22 21 17 24 24 C 1.42895 * 117.00104 * 180.02562 * 23 22 21 25 25 C 1.53002 * 109.47076 * 180.02562 * 24 23 22 26 26 C 1.38718 * 119.99843 * 0.28282 * 22 21 17 27 27 C 1.38105 * 119.99855 * 359.44643 * 26 22 21 28 28 C 1.53780 * 113.61366 * 180.02562 * 6 4 3 29 29 H 1.09001 * 109.47532 * 180.02562 * 1 2 3 30 30 H 1.09005 * 109.46675 * 299.99885 * 1 2 3 31 31 H 1.08992 * 109.47304 * 59.99578 * 1 2 3 32 32 H 1.09004 * 109.47160 * 239.99901 * 2 1 3 33 33 H 1.09006 * 109.47223 * 120.00326 * 2 1 3 34 34 H 1.09009 * 113.61309 * 25.43373 * 8 6 4 35 35 H 1.08998 * 113.61824 * 254.53227 * 8 6 4 36 36 H 1.09000 * 109.47364 * 322.50554 * 11 9 8 37 37 H 1.09008 * 109.46926 * 202.50032 * 11 9 8 38 38 H 1.08999 * 109.47252 * 45.34117 * 18 17 16 39 39 H 0.96698 * 113.99989 * 65.84203 * 19 18 17 40 40 H 1.48497 * 110.00108 * 178.68039 * 20 18 17 41 41 H 1.48500 * 109.99910 * 300.00066 * 20 18 17 42 42 H 1.08002 * 119.99890 * 179.97438 * 21 17 16 43 43 H 1.09001 * 109.46891 * 299.99867 * 24 23 22 44 44 H 1.08999 * 109.47566 * 59.99832 * 24 23 22 45 45 H 1.08992 * 109.47286 * 299.99533 * 25 24 23 46 46 H 1.09001 * 109.47030 * 60.00052 * 25 24 23 47 47 H 1.09004 * 109.46481 * 179.97438 * 25 24 23 48 48 H 1.08000 * 119.99759 * 179.69798 * 26 22 21 49 49 H 1.08006 * 119.99725 * 180.25564 * 27 26 22 50 50 H 1.08996 * 113.61933 * 105.47007 * 28 6 4 51 51 H 1.08999 * 113.61528 * 334.56254 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0807 0.5865 -0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.4708 3.5829 -0.7543 8 6 3.9870 3.5761 1.3973 9 6 5.3570 4.1418 0.9876 10 9 6.3117 4.0979 2.0095 11 6 5.2766 5.5101 0.3079 12 16 5.1613 6.8069 1.5710 13 8 6.3796 6.9073 2.2954 14 8 3.9121 6.7371 2.2447 15 8 5.0887 8.1040 0.7781 16 6 3.8860 8.3214 0.1820 17 6 3.7199 8.0428 -1.1663 18 6 4.8720 7.4983 -1.9707 19 8 5.8090 8.5457 -2.2300 20 14 4.2365 6.8198 -3.5852 21 6 2.4981 8.2642 -1.7720 22 6 1.4377 8.7646 -1.0316 23 8 0.2349 8.9820 -1.6276 24 6 -0.8128 9.4991 -0.8049 25 6 -2.0799 9.6760 -1.6440 26 6 1.6054 9.0482 0.3159 27 6 2.8251 8.8216 0.9227 28 6 5.4583 2.9679 -0.0013 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8901 31 1 -0.3633 0.5139 -0.8899 32 1 1.8933 -0.5139 -0.8900 33 1 1.8933 -0.5139 0.8900 34 1 4.0395 2.8489 2.2078 35 1 3.2301 4.3425 1.5634 36 1 4.3949 5.5467 -0.3320 37 1 6.1704 5.6691 -0.2955 38 1 5.3626 6.7025 -1.4101 39 1 6.2480 8.8856 -1.4384 40 1 5.3668 6.3086 -4.4014 41 1 3.2611 5.7297 -3.3292 42 1 2.3689 8.0477 -2.8222 43 1 -1.0115 8.8035 0.0104 44 1 -0.5107 10.4628 -0.3948 45 1 -1.8816 10.3714 -2.4595 46 1 -2.3818 8.7121 -2.0537 47 1 -2.8792 10.0700 -1.0162 48 1 0.7809 9.4425 0.8914 49 1 2.9545 9.0386 1.9728 50 1 5.8888 3.2437 -0.9640 51 1 5.9132 2.0746 0.4265 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_80656_15494190.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:23:46 Heat of formation + Delta-G solvation = -237.690895 kcal Electronic energy + Delta-G solvation = -41282.988040 eV Core-core repulsion = 35772.900402 eV Total energy + Delta-G solvation = -5510.087638 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 419.132 amu Computer time = 2.28 seconds Orbital eigenvalues (eV) -49.10834 -42.69736 -41.94050 -40.96093 -39.73923 -38.79110 -38.46433 -37.57394 -37.44421 -37.30554 -33.32745 -33.05558 -32.84952 -31.83107 -30.45073 -27.71699 -27.50301 -26.98991 -24.84473 -24.73220 -24.15852 -22.92322 -22.45497 -21.73736 -20.63585 -19.93975 -19.56808 -19.39959 -18.88570 -18.62007 -18.42651 -18.05657 -17.75351 -17.36446 -17.32546 -17.06885 -16.91672 -16.44206 -16.28763 -16.12454 -15.69824 -15.58624 -15.54148 -15.25850 -14.96626 -14.74884 -14.67918 -14.45897 -14.35847 -14.19090 -14.03842 -13.89459 -13.86510 -13.83710 -13.63466 -13.39952 -13.33541 -13.22662 -13.17013 -13.06926 -12.96454 -12.90092 -12.67893 -12.59334 -12.40639 -12.19905 -12.16799 -11.92445 -11.67587 -11.61715 -11.58332 -11.49765 -11.41010 -10.43713 -9.59703 -5.10427 -1.35211 -0.31794 -0.12833 0.78328 0.98791 1.06819 1.40545 1.45307 1.76633 1.79873 2.08284 2.16999 2.38975 2.55221 2.66553 2.76389 2.96431 3.06970 3.11720 3.31440 3.36810 3.49537 3.55391 3.60675 3.67400 3.72180 3.74755 3.75542 3.78271 3.87599 3.91100 3.93828 3.95868 4.07392 4.14825 4.21311 4.22303 4.28986 4.36233 4.42616 4.48480 4.57170 4.64202 4.66490 4.72911 4.73535 4.77986 4.82483 4.82803 4.94295 4.98205 5.19243 5.33763 5.99945 6.28988 6.59532 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.354 6.354 4 C 0.476 3.524 5 O -0.498 6.498 6 C -0.110 4.110 7 H 0.133 0.867 8 C -0.146 4.146 9 C 0.104 3.896 10 F -0.178 7.178 11 C -0.682 4.682 12 S 2.595 3.405 13 O -0.902 6.902 14 O -0.936 6.936 15 O -0.653 6.653 16 C 0.017 3.983 17 C -0.069 4.069 18 C -0.104 4.104 19 O -0.522 6.522 20 Si 0.742 3.258 21 C -0.133 4.133 22 C 0.168 3.832 23 O -0.304 6.304 24 C 0.048 3.952 25 C -0.154 4.154 26 C -0.192 4.192 27 C -0.035 4.035 28 C -0.122 4.122 29 H 0.082 0.918 30 H 0.068 0.932 31 H 0.068 0.932 32 H 0.072 0.928 33 H 0.072 0.928 34 H 0.118 0.882 35 H 0.111 0.889 36 H 0.155 0.845 37 H 0.161 0.839 38 H 0.076 0.924 39 H 0.373 0.627 40 H -0.245 1.245 41 H -0.240 1.240 42 H 0.154 0.846 43 H 0.069 0.931 44 H 0.069 0.931 45 H 0.069 0.931 46 H 0.069 0.931 47 H 0.082 0.918 48 H 0.149 0.851 49 H 0.151 0.849 50 H 0.099 0.901 51 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.268 2.070 -3.834 9.346 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.271 6.271 4 C 0.318 3.682 5 O -0.385 6.385 6 C -0.129 4.129 7 H 0.151 0.849 8 C -0.183 4.183 9 C 0.085 3.915 10 F -0.158 7.158 11 C -0.805 4.805 12 S 2.687 3.313 13 O -0.900 6.900 14 O -0.934 6.934 15 O -0.612 6.612 16 C -0.025 4.025 17 C -0.072 4.072 18 C -0.212 4.212 19 O -0.328 6.328 20 Si 0.638 3.362 21 C -0.151 4.151 22 C 0.120 3.880 23 O -0.217 6.217 24 C -0.026 4.026 25 C -0.211 4.211 26 C -0.211 4.211 27 C -0.056 4.056 28 C -0.160 4.160 29 H 0.101 0.899 30 H 0.087 0.913 31 H 0.087 0.913 32 H 0.090 0.910 33 H 0.091 0.909 34 H 0.136 0.864 35 H 0.130 0.870 36 H 0.173 0.827 37 H 0.179 0.821 38 H 0.093 0.907 39 H 0.222 0.778 40 H -0.169 1.169 41 H -0.164 1.164 42 H 0.171 0.829 43 H 0.087 0.913 44 H 0.087 0.913 45 H 0.088 0.912 46 H 0.088 0.912 47 H 0.101 0.899 48 H 0.167 0.833 49 H 0.169 0.831 50 H 0.117 0.883 51 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -8.203 1.330 -4.502 9.451 hybrid contribution 1.033 -0.586 1.463 1.884 sum -7.169 0.744 -3.039 7.822 Atomic orbital electron populations 1.21827 0.92150 1.03378 1.03736 1.23140 0.95744 0.79522 1.02917 1.86505 1.23906 1.33078 1.83562 1.23074 0.80957 0.91667 0.72524 1.90709 1.60528 1.42593 1.44713 1.22288 0.97299 0.92396 1.00921 0.84924 1.23843 0.95775 1.02086 0.96612 1.21508 0.89056 0.93152 0.87809 1.93015 1.65638 1.97176 1.59953 1.31575 1.13797 1.14191 1.20894 1.05746 0.75365 0.74679 0.75531 1.93703 1.46202 1.83353 1.66786 1.93658 1.44265 1.84488 1.71034 1.85778 1.41755 1.59814 1.73851 1.17739 0.81328 1.11783 0.91639 1.20232 0.95944 0.99023 0.92032 1.26018 0.90094 0.93739 1.11307 1.86778 1.56444 1.53211 1.36361 0.92260 0.82671 0.82769 0.78515 1.20049 0.89904 1.04669 1.00455 1.19030 0.85757 0.92214 0.90987 1.86159 1.17767 1.78791 1.39012 1.23007 0.86513 0.98868 0.94236 1.21804 0.94698 1.03622 1.01001 1.21282 0.98993 1.06768 0.94068 1.21255 0.90797 0.92615 1.00891 1.23637 0.93536 0.98239 1.00589 0.89880 0.91271 0.91319 0.90955 0.90920 0.86408 0.87020 0.82704 0.82108 0.90719 0.77825 1.16885 1.16371 0.82913 0.91272 0.91280 0.91159 0.91211 0.89909 0.83318 0.83143 0.88287 0.85874 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 27. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.31 10.29 37.15 0.38 0.70 16 2 C 0.06 -0.01 6.19 37.15 0.23 0.22 16 3 O -0.35 -0.42 10.22 -39.25 -0.40 -0.82 16 4 C 0.48 0.76 7.48 36.01 0.27 1.03 16 5 O -0.50 -2.16 15.65 -18.75 -0.29 -2.46 16 6 C -0.11 0.11 3.91 -90.96 -0.36 -0.24 16 7 H 0.13 -0.47 7.65 -51.93 -0.40 -0.86 16 8 C -0.15 0.10 7.09 -25.92 -0.18 -0.08 16 9 C 0.10 0.01 1.79 -89.79 -0.16 -0.15 16 10 F -0.18 -0.54 16.31 2.25 0.04 -0.50 16 11 C -0.68 0.98 3.59 37.16 0.13 1.11 16 12 S 2.59 4.67 4.88 -107.50 -0.53 4.14 16 13 O -0.90 -5.10 17.53 -67.04 -1.18 -6.27 16 14 O -0.94 -2.51 15.03 -67.03 -1.01 -3.52 16 15 O -0.65 -0.56 9.02 -52.02 -0.47 -1.03 16 16 C 0.02 0.00 4.92 -39.24 -0.19 -0.19 16 17 C -0.07 0.06 4.70 -104.50 -0.49 -0.43 16 18 C -0.10 0.14 1.98 36.00 0.07 0.21 16 19 O -0.52 0.12 12.63 -35.23 -0.45 -0.33 16 20 Si 0.74 -1.53 30.17 -169.99 -5.13 -6.66 16 21 C -0.13 0.19 8.59 -39.45 -0.34 -0.15 16 22 C 0.17 -0.19 6.69 -39.24 -0.26 -0.45 16 23 O -0.30 0.40 10.14 -19.69 -0.20 0.20 16 24 C 0.05 -0.17 5.46 37.16 0.20 0.03 16 25 C -0.15 0.62 10.28 37.16 0.38 1.00 16 26 C -0.19 0.30 9.03 -39.45 -0.36 -0.06 16 27 C -0.04 0.01 8.50 -39.45 -0.34 -0.33 16 28 C -0.12 0.10 6.89 -25.90 -0.18 -0.08 16 29 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 30 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 31 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 33 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 34 H 0.12 -0.09 8.09 -51.92 -0.42 -0.51 16 35 H 0.11 -0.19 7.51 -51.93 -0.39 -0.58 16 36 H 0.15 -0.63 5.84 -51.92 -0.30 -0.93 16 37 H 0.16 -0.61 6.96 -51.92 -0.36 -0.97 16 38 H 0.08 -0.22 3.36 -51.93 -0.17 -0.39 16 39 H 0.37 -0.74 8.70 45.56 0.40 -0.34 16 40 H -0.24 -0.14 7.11 56.52 0.40 0.27 16 41 H -0.24 0.46 7.11 56.52 0.40 0.87 16 42 H 0.15 -0.52 5.12 -52.49 -0.27 -0.79 16 43 H 0.07 -0.31 7.67 -51.93 -0.40 -0.71 16 44 H 0.07 -0.31 7.65 -51.93 -0.40 -0.71 16 45 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 46 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 47 H 0.08 -0.42 8.14 -51.93 -0.42 -0.84 16 48 H 0.15 -0.57 6.29 -52.49 -0.33 -0.91 16 49 H 0.15 -0.13 7.79 -52.48 -0.41 -0.54 16 50 H 0.10 -0.27 8.10 -51.93 -0.42 -0.69 16 51 H 0.12 0.04 7.43 -51.93 -0.39 -0.35 16 LS Contribution 426.46 15.07 6.43 6.43 Total: 0.00 -10.51 426.46 -11.20 -21.72 By element: Atomic # 1 Polarization: -6.18 SS G_CDS: -6.84 Total: -13.02 kcal Atomic # 6 Polarization: 3.31 SS G_CDS: -1.18 Total: 2.13 kcal Atomic # 8 Polarization: -10.25 SS G_CDS: -3.99 Total: -14.24 kcal Atomic # 9 Polarization: -0.54 SS G_CDS: 0.04 Total: -0.50 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.13 Total: -6.66 kcal Atomic # 16 Polarization: 4.67 SS G_CDS: -0.53 Total: 4.14 kcal Total LS contribution 6.43 Total: 6.43 kcal Total: -10.51 -11.20 -21.72 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_80656_15494190.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -215.974 kcal (2) G-P(sol) polarization free energy of solvation -10.513 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -226.487 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.204 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.717 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.691 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.28 seconds