Wall clock time and date at job start Mon Mar 8 2021 13:05:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86298 * 109.47213 * 2 1 4 4 C 1.50699 * 109.47261 * 240.00011 * 2 1 3 5 5 C 1.38185 * 120.01076 * 103.69862 * 4 2 1 6 6 C 1.38361 * 120.08267 * 180.27869 * 5 4 2 7 7 Cl 1.73607 * 119.95063 * 179.77023 * 6 5 4 8 8 C 1.38355 * 120.10108 * 359.74331 * 6 5 4 9 9 C 1.38326 * 120.01678 * 359.97438 * 8 6 5 10 10 F 1.35098 * 120.04260 * 180.02562 * 9 8 6 11 11 C 1.38652 * 120.01235 * 283.44796 * 4 2 1 12 12 O 1.35976 * 120.04644 * 359.97438 * 11 4 2 13 13 S 1.52200 * 114.00010 * 94.86519 * 12 11 4 14 14 O 1.42098 * 104.27840 * 320.72783 * 13 12 11 15 15 O 1.42104 * 104.27937 * 192.86966 * 13 12 11 16 16 C 1.81400 * 104.44890 * 76.79719 * 13 12 11 17 17 H 1.09000 * 112.84666 * 40.00164 * 16 13 12 18 18 C 1.53779 * 113.61398 * 171.19313 * 16 13 12 19 19 C 1.53786 * 87.07691 * 139.98245 * 18 16 13 20 20 H 1.09003 * 113.61032 * 219.93357 * 19 18 16 21 21 O 1.42894 * 113.61318 * 89.12147 * 19 18 16 22 22 C 1.42904 * 114.00053 * 149.99745 * 21 19 18 23 23 C 1.50704 * 109.47056 * 179.97438 * 22 21 19 24 24 C 1.38229 * 119.99997 * 90.00046 * 23 22 21 25 25 C 1.38235 * 120.00227 * 179.97438 * 24 23 22 26 26 C 1.38240 * 120.00007 * 359.97438 * 25 24 23 27 27 C 1.38234 * 119.99558 * 0.27375 * 26 25 24 28 28 C 1.38238 * 120.00375 * 359.51430 * 27 26 25 29 29 C 1.53773 * 87.08232 * 334.56809 * 19 18 16 30 30 H 0.96699 * 114.00147 * 59.99567 * 1 2 3 31 31 H 1.08999 * 109.47421 * 120.00520 * 2 1 3 32 32 H 1.48501 * 110.00076 * 60.00205 * 3 2 1 33 33 H 1.48501 * 110.00103 * 181.31880 * 3 2 1 34 34 H 1.08008 * 119.95765 * 0.04289 * 5 4 2 35 35 H 1.08002 * 119.99037 * 180.02562 * 8 6 5 36 36 H 1.09000 * 113.61411 * 25.43800 * 18 16 13 37 37 H 1.08997 * 113.69560 * 254.53889 * 18 16 13 38 38 H 1.09003 * 109.47145 * 59.99958 * 22 21 19 39 39 H 1.08998 * 109.47394 * 299.99379 * 22 21 19 40 40 H 1.08003 * 120.00160 * 359.97438 * 24 23 22 41 41 H 1.07998 * 120.00046 * 179.97438 * 25 24 23 42 42 H 1.07998 * 120.00074 * 179.97438 * 26 25 24 43 43 H 1.07996 * 119.99991 * 179.72330 * 27 26 25 44 44 H 1.07990 * 120.00247 * 180.27603 * 28 27 26 45 45 H 1.09004 * 113.61487 * 139.98380 * 29 19 18 46 46 H 1.08998 * 113.61819 * 270.88532 * 29 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.4289 0.0178 -2.2942 6 6 2.8852 -0.6326 -3.4270 7 17 3.5040 0.2860 -4.7638 8 6 2.8495 -2.0140 -3.4957 9 6 2.3577 -2.7473 -2.4309 10 9 2.3231 -4.0962 -2.4972 11 6 1.8993 -2.0951 -1.2935 12 8 1.4152 -2.8133 -0.2452 13 16 -0.0547 -3.1859 -0.3763 14 8 -0.6595 -2.0319 -0.9434 15 8 -0.4178 -3.6413 0.9199 16 6 -0.0695 -4.5596 -1.5610 17 1 0.7559 -5.2557 -1.4122 18 6 -1.4392 -5.2467 -1.6904 19 6 -1.1677 -5.3277 -3.2019 20 1 -2.0458 -5.1240 -3.8147 21 8 -0.4791 -6.5159 -3.5968 22 6 -0.7912 -6.9560 -4.9201 23 6 -0.0127 -8.2087 -5.2296 24 6 -0.5527 -9.4475 -4.9390 25 6 0.1611 -10.5967 -5.2233 26 6 1.4148 -10.5070 -5.7987 27 6 1.9570 -9.2680 -6.0846 28 6 1.2413 -8.1190 -5.8043 29 6 -0.2442 -4.1115 -3.0216 30 1 -0.3933 0.4417 -0.7650 31 1 1.7923 -0.5139 0.8899 32 1 1.5615 2.4679 1.2085 33 1 3.5346 1.7703 -0.0321 34 1 2.4581 1.0963 -2.2429 35 1 3.2065 -2.5199 -4.3806 36 1 -2.2780 -4.6006 -1.4315 37 1 -1.4886 -6.2203 -1.2028 38 1 -0.5244 -6.1771 -5.6345 39 1 -1.8587 -7.1643 -4.9914 40 1 -1.5324 -9.5177 -4.4898 41 1 -0.2607 -11.5645 -4.9958 42 1 1.9727 -11.4048 -6.0205 43 1 2.9383 -9.1977 -6.5300 44 1 1.6630 -7.1512 -6.0318 45 1 0.6725 -4.1685 -3.6085 46 1 -0.7563 -3.1550 -3.1266 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_8159124_15608174.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:05:32 Heat of formation + Delta-G solvation = -117.559276 kcal Electronic energy + Delta-G solvation = -38809.358938 eV Core-core repulsion = 33508.442006 eV Total energy + Delta-G solvation = -5300.916932 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 429.062 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -50.63357 -42.42992 -40.83042 -39.99860 -39.86413 -38.23337 -38.02601 -37.40995 -37.10275 -36.95170 -33.03466 -32.74282 -31.85740 -31.51309 -27.64880 -27.41468 -27.12711 -26.52554 -24.96565 -23.54719 -23.53937 -22.34535 -22.20689 -21.06639 -19.87104 -19.28195 -19.20064 -18.81275 -18.29500 -17.83645 -17.69936 -17.54770 -17.03671 -16.98785 -16.70840 -16.48444 -16.26014 -16.12153 -15.81071 -15.59746 -15.57717 -15.32328 -14.93950 -14.67121 -14.57358 -14.36517 -14.18458 -14.16992 -14.11514 -13.82987 -13.73324 -13.64409 -13.51874 -13.24951 -13.19672 -13.03203 -12.96088 -12.60850 -12.48038 -12.20148 -12.17293 -12.11290 -12.07495 -11.93920 -11.81873 -11.21603 -10.65820 -10.53271 -10.49822 -10.16793 -9.86921 -9.81575 -5.18785 -1.21035 -0.61768 -0.48814 0.27897 0.45430 0.54242 0.92768 1.05393 1.51582 1.66181 1.85560 2.33289 2.38620 2.51474 2.73456 2.91621 2.93513 3.13475 3.18819 3.31170 3.35349 3.40514 3.46768 3.58159 3.72552 3.80883 3.82542 3.92747 4.03107 4.06678 4.08990 4.18737 4.22999 4.24163 4.26349 4.32425 4.38756 4.43869 4.51187 4.56087 4.56889 4.67520 4.68152 4.73648 4.84358 4.99884 5.07333 5.07974 5.48937 5.56919 5.59401 6.01332 6.08760 6.62888 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.511 6.511 2 C -0.089 4.089 3 Si 0.694 3.306 4 C -0.052 4.052 5 C -0.101 4.101 6 C 0.009 3.991 7 Cl -0.029 7.029 8 C -0.126 4.126 9 C 0.107 3.893 10 F -0.109 7.109 11 C 0.070 3.930 12 O -0.656 6.656 13 S 2.589 3.411 14 O -0.918 6.918 15 O -0.920 6.920 16 C -0.640 4.640 17 H 0.162 0.838 18 C -0.106 4.106 19 C 0.082 3.918 20 H 0.088 0.912 21 O -0.354 6.354 22 C 0.102 3.898 23 C -0.095 4.095 24 C -0.098 4.098 25 C -0.123 4.123 26 C -0.112 4.112 27 C -0.123 4.123 28 C -0.098 4.098 29 C -0.143 4.143 30 H 0.386 0.614 31 H 0.123 0.877 32 H -0.243 1.243 33 H -0.249 1.249 34 H 0.161 0.839 35 H 0.166 0.834 36 H 0.103 0.897 37 H 0.101 0.899 38 H 0.061 0.939 39 H 0.062 0.938 40 H 0.123 0.877 41 H 0.125 0.875 42 H 0.124 0.876 43 H 0.124 0.876 44 H 0.122 0.878 45 H 0.098 0.902 46 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.127 2.160 -7.425 7.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.317 6.317 2 C -0.199 4.199 3 Si 0.593 3.407 4 C -0.055 4.055 5 C -0.119 4.119 6 C -0.018 4.018 7 Cl 0.000 7.000 8 C -0.145 4.145 9 C 0.085 3.915 10 F -0.087 7.087 11 C 0.027 3.973 12 O -0.614 6.614 13 S 2.684 3.316 14 O -0.917 6.917 15 O -0.918 6.918 16 C -0.747 4.747 17 H 0.180 0.820 18 C -0.145 4.145 19 C 0.022 3.978 20 H 0.106 0.894 21 O -0.273 6.273 22 C 0.026 3.974 23 C -0.095 4.095 24 C -0.116 4.116 25 C -0.141 4.141 26 C -0.130 4.130 27 C -0.141 4.141 28 C -0.116 4.116 29 C -0.181 4.181 30 H 0.235 0.765 31 H 0.140 0.860 32 H -0.168 1.168 33 H -0.174 1.174 34 H 0.178 0.822 35 H 0.184 0.816 36 H 0.121 0.879 37 H 0.119 0.881 38 H 0.079 0.921 39 H 0.080 0.920 40 H 0.141 0.859 41 H 0.143 0.857 42 H 0.142 0.858 43 H 0.142 0.858 44 H 0.140 0.860 45 H 0.117 0.883 46 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 0.763 2.784 -5.776 6.457 hybrid contribution 0.248 -1.626 -0.291 1.671 sum 1.010 1.158 -6.067 6.259 Atomic orbital electron populations 1.86637 1.14156 1.81873 1.48987 1.25329 0.87625 1.10881 0.96037 0.94997 0.81102 0.76378 0.88261 1.20436 0.96387 0.91103 0.97578 1.20928 0.99009 1.00952 0.91028 1.20682 0.98723 0.91541 0.90902 1.98453 1.84959 1.72794 1.43752 1.20976 1.01769 0.92507 0.99264 1.17570 1.01745 0.78148 0.94013 1.91614 1.93684 1.27116 1.96285 1.17717 1.05341 0.89865 0.84394 1.85767 1.53037 1.72706 1.49931 1.05876 0.73066 0.76468 0.76200 1.93646 1.74370 1.43397 1.80238 1.93652 1.78920 1.83210 1.36011 1.32334 1.08584 1.20137 1.13672 0.82032 1.22825 0.91952 1.02606 0.97104 1.22762 0.94374 0.85333 0.95294 0.89406 1.87996 1.66938 1.41398 1.30964 1.21437 0.98037 0.93635 0.84326 1.19549 0.95585 0.93811 1.00555 1.21085 1.00098 0.91898 0.98530 1.21202 0.95092 0.98548 0.99254 1.21268 0.95689 0.97868 0.98192 1.21192 1.00060 0.92498 1.00388 1.21064 0.93654 0.98759 0.98129 1.23534 1.03240 0.99982 0.91364 0.76519 0.85965 1.16755 1.17363 0.82206 0.81646 0.87855 0.88089 0.92053 0.91954 0.85880 0.85732 0.85822 0.85768 0.85969 0.88313 0.86883 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.51 -0.59 9.74 -59.03 -0.58 -1.17 16 2 C -0.09 -0.02 2.37 36.01 0.09 0.07 16 3 Si 0.69 -1.31 29.94 -169.99 -5.09 -6.40 16 4 C -0.05 0.01 4.89 -104.49 -0.51 -0.50 16 5 C -0.10 0.25 8.44 -39.56 -0.33 -0.09 16 6 C 0.01 -0.02 6.32 -39.49 -0.25 -0.27 16 7 Cl -0.03 0.07 28.95 -51.86 -1.50 -1.43 16 8 C -0.13 0.29 9.80 -39.51 -0.39 -0.10 16 9 C 0.11 -0.04 5.55 -39.30 -0.22 -0.26 16 10 F -0.11 -0.02 12.15 2.25 0.03 0.01 16 11 C 0.07 0.08 4.68 -39.18 -0.18 -0.10 16 12 O -0.66 -2.02 9.22 -51.99 -0.48 -2.50 16 13 S 2.59 7.67 5.21 -107.50 -0.56 7.11 16 14 O -0.92 -2.32 12.26 -70.72 -0.87 -3.19 16 15 O -0.92 -6.49 18.09 -67.04 -1.21 -7.71 16 16 C -0.64 -0.32 2.91 -25.92 -0.08 -0.39 16 17 H 0.16 0.10 7.17 -51.93 -0.37 -0.27 16 18 C -0.11 0.05 7.50 -25.92 -0.19 -0.15 16 19 C 0.08 -0.08 4.37 -25.92 -0.11 -0.19 16 20 H 0.09 -0.26 7.87 -51.93 -0.41 -0.67 16 21 O -0.35 -0.36 10.25 -35.23 -0.36 -0.72 16 22 C 0.10 -0.05 5.90 36.01 0.21 0.16 16 23 C -0.09 -0.09 5.51 -104.62 -0.58 -0.67 16 24 C -0.10 -0.09 9.70 -39.59 -0.38 -0.47 16 25 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 26 C -0.11 -0.06 10.05 -39.58 -0.40 -0.46 16 27 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 28 C -0.10 -0.07 9.70 -39.58 -0.38 -0.46 16 29 C -0.14 0.17 5.94 -25.92 -0.15 0.01 16 30 H 0.39 -1.03 8.61 45.56 0.39 -0.64 16 31 H 0.12 0.15 7.78 -51.93 -0.40 -0.25 16 32 H -0.24 -0.33 7.11 56.52 0.40 0.08 16 33 H -0.25 0.01 7.11 56.52 0.40 0.42 16 34 H 0.16 -0.82 5.17 -52.48 -0.27 -1.09 16 35 H 0.17 -0.72 8.06 -52.49 -0.42 -1.15 16 36 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 37 H 0.10 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.06 -0.11 8.08 -51.93 -0.42 -0.53 16 39 H 0.06 -0.11 8.09 -51.93 -0.42 -0.53 16 40 H 0.12 -0.06 8.06 -52.48 -0.42 -0.48 16 41 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 42 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 43 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 44 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 45 H 0.10 -0.15 5.76 -51.93 -0.30 -0.45 16 46 H 0.11 -0.27 7.31 -51.93 -0.38 -0.65 16 LS Contribution 404.18 15.07 6.09 6.09 Total: 0.00 -9.89 404.18 -14.35 -24.24 By element: Atomic # 1 Polarization: -4.36 SS G_CDS: -5.16 Total: -9.52 kcal Atomic # 6 Polarization: -0.16 SS G_CDS: -4.66 Total: -4.81 kcal Atomic # 8 Polarization: -11.79 SS G_CDS: -3.50 Total: -15.28 kcal Atomic # 9 Polarization: -0.02 SS G_CDS: 0.03 Total: 0.01 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.09 Total: -6.40 kcal Atomic # 16 Polarization: 7.67 SS G_CDS: -0.56 Total: 7.11 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -1.50 Total: -1.43 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -9.89 -14.35 -24.24 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_8159124_15608174.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.323 kcal (2) G-P(sol) polarization free energy of solvation -9.888 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.212 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.348 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.236 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.559 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds