Wall clock time and date at job start Mon Mar 8 2021 11:23:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34237 * 116.99530 * 2 1 4 4 O 1.20820 * 119.99963 * 359.97438 * 3 2 1 5 5 C 1.50698 * 119.99825 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.84835 * 48.80080 * 5 3 2 7 7 C 1.53772 * 113.61581 * 180.02562 * 5 3 2 8 8 C 1.53779 * 87.08389 * 139.97996 * 7 5 3 9 9 H 1.09011 * 113.61252 * 89.20314 * 8 7 5 10 10 S 1.81400 * 113.61631 * 220.01841 * 8 7 5 11 11 O 1.42091 * 110.54245 * 67.03570 * 10 8 7 12 12 O 1.42104 * 110.54265 * 290.28230 * 10 8 7 13 13 O 1.52201 * 104.44943 * 178.65725 * 10 8 7 14 14 C 1.35924 * 113.99758 * 76.70140 * 13 10 8 15 15 C 1.38704 * 120.04626 * 80.24823 * 14 13 10 16 16 C 1.50693 * 120.01942 * 0.03780 * 15 14 13 17 17 C 1.38163 * 119.95595 * 180.27510 * 15 14 13 18 18 C 1.38349 * 120.04481 * 359.74257 * 17 15 14 19 19 Cl 1.73595 * 119.95553 * 179.97438 * 18 17 15 20 20 C 1.38381 * 120.08297 * 359.97438 * 18 17 15 21 21 C 1.38120 * 120.04453 * 0.02562 * 20 18 17 22 22 C 1.50707 * 120.01915 * 179.97438 * 21 20 18 23 23 O 1.42898 * 109.46836 * 104.54524 * 22 21 20 24 24 Si 1.86296 * 109.47352 * 344.53971 * 22 21 20 25 25 C 1.53772 * 87.17265 * 334.61213 * 8 7 5 26 26 H 1.08995 * 109.47175 * 60.00310 * 1 2 3 27 27 H 1.09010 * 109.46734 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.47223 * 299.99223 * 1 2 3 29 29 H 1.09003 * 113.61599 * 25.43155 * 7 5 3 30 30 H 1.09003 * 113.62101 * 254.53215 * 7 5 3 31 31 H 1.08995 * 109.47632 * 264.40451 * 16 15 14 32 32 H 1.09005 * 109.47265 * 24.40731 * 16 15 14 33 33 H 1.09004 * 109.47346 * 144.40173 * 16 15 14 34 34 H 1.08000 * 119.97849 * 179.72364 * 17 15 14 35 35 H 1.08004 * 119.97794 * 180.02562 * 20 18 17 36 36 H 1.09000 * 109.46684 * 224.53854 * 22 21 20 37 37 H 0.96696 * 114.00599 * 65.52721 * 23 22 21 38 38 H 1.48501 * 110.00213 * 300.00225 * 24 22 21 39 39 H 1.48498 * 109.99863 * 61.31923 * 24 22 21 40 40 H 1.09006 * 113.61695 * 139.93721 * 25 8 7 41 41 H 1.08997 * 113.61354 * 270.84026 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5662 1.2751 0.0006 6 1 4.0238 0.6364 -0.7549 7 6 4.1076 2.7143 0.0011 8 6 5.1805 2.2268 0.9890 9 1 6.0812 1.8497 0.5044 10 16 5.5379 3.4105 2.3163 11 8 4.4148 3.5503 3.1755 12 8 6.2117 4.5502 1.8000 13 8 6.5833 2.7137 3.1754 14 6 7.8331 2.7227 2.6412 15 6 8.6303 3.8518 2.7584 16 6 8.1115 5.0694 3.4788 17 6 9.8983 3.8610 2.2098 18 6 10.3751 2.7431 1.5486 19 17 11.9684 2.7575 0.8596 20 6 9.5835 1.6137 1.4358 21 6 8.3153 1.6006 1.9829 22 6 7.4535 0.3705 1.8592 23 8 7.4222 -0.3170 3.1115 24 14 8.1589 -0.7531 0.5513 25 6 4.1926 1.1218 1.3986 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0278 0.0005 28 1 -0.3634 0.5137 0.8900 29 1 3.4169 3.4405 0.4299 30 1 4.5110 3.0296 -0.9612 31 1 7.6938 5.7694 2.7552 32 1 7.3366 4.7712 4.1850 33 1 8.9290 5.5486 4.0176 34 1 10.5176 4.7415 2.2969 35 1 9.9576 0.7419 0.9196 36 1 6.4413 0.6627 1.5798 37 1 6.9891 0.1772 3.8209 38 1 8.1967 -0.0497 -0.7560 39 1 9.5269 -1.1840 0.9359 40 1 4.6646 0.1530 1.5628 41 1 3.5253 1.4117 2.2101 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_8270826_13206342.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:23:06 Heat of formation + Delta-G solvation = -151.578454 kcal Electronic energy + Delta-G solvation = -32156.813629 eV Core-core repulsion = 27545.409339 eV Total energy + Delta-G solvation = -4611.404290 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.056 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.87435 -41.96667 -39.92743 -39.67387 -38.60844 -38.08636 -37.59993 -37.46912 -37.40118 -34.40848 -32.02444 -29.97537 -28.66295 -28.11060 -27.35081 -26.86166 -24.43853 -23.51601 -22.74695 -21.84230 -20.83975 -20.08578 -19.45734 -19.01534 -18.60325 -18.49359 -17.98491 -17.71668 -17.51129 -16.81975 -16.68518 -16.59255 -15.87518 -15.63562 -15.41937 -14.98275 -14.87289 -14.71334 -14.52308 -14.24123 -14.15093 -13.99422 -13.92220 -13.91053 -13.81468 -13.61998 -13.42297 -13.29899 -13.14996 -13.08113 -13.03505 -12.78637 -12.47069 -12.33946 -12.19402 -11.95547 -11.84627 -11.68616 -11.47989 -11.37522 -11.22575 -10.28909 -10.05638 -4.88064 -1.40093 -0.47388 -0.35795 0.64065 0.75818 1.02294 1.17112 1.59651 1.67244 1.86289 1.92202 2.26669 2.43198 2.68387 2.89134 2.99474 3.13983 3.15121 3.43823 3.50921 3.61912 3.66520 3.70993 3.83187 3.88973 3.98711 4.16595 4.24955 4.28312 4.29850 4.30920 4.34706 4.41293 4.54866 4.58966 4.60060 4.66716 4.70494 4.72672 4.84894 4.89853 4.94305 5.26310 5.31926 6.46813 6.61131 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.354 6.354 3 C 0.464 3.536 4 O -0.540 6.540 5 C -0.088 4.088 6 H 0.182 0.818 7 C -0.096 4.096 8 C -0.647 4.647 9 H 0.191 0.809 10 S 2.584 3.416 11 O -0.953 6.953 12 O -0.958 6.958 13 O -0.654 6.654 14 C 0.057 3.943 15 C -0.040 4.040 16 C -0.136 4.136 17 C -0.095 4.095 18 C -0.010 4.010 19 Cl -0.044 7.044 20 C -0.119 4.119 21 C -0.092 4.092 22 C -0.118 4.118 23 O -0.531 6.531 24 Si 0.797 3.203 25 C -0.102 4.102 26 H 0.061 0.939 27 H 0.131 0.869 28 H 0.058 0.942 29 H 0.089 0.911 30 H 0.130 0.870 31 H 0.105 0.895 32 H 0.058 0.942 33 H 0.105 0.895 34 H 0.174 0.826 35 H 0.153 0.847 36 H 0.103 0.897 37 H 0.379 0.621 38 H -0.236 1.236 39 H -0.281 1.281 40 H 0.147 0.853 41 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.945 -5.516 -3.687 6.701 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.270 6.270 3 C 0.308 3.692 4 O -0.429 6.429 5 C -0.107 4.107 6 H 0.199 0.801 7 C -0.135 4.135 8 C -0.756 4.756 9 H 0.209 0.791 10 S 2.684 3.316 11 O -0.951 6.951 12 O -0.957 6.957 13 O -0.613 6.613 14 C 0.015 3.985 15 C -0.042 4.042 16 C -0.193 4.193 17 C -0.114 4.114 18 C -0.038 4.038 19 Cl -0.015 7.015 20 C -0.137 4.137 21 C -0.095 4.095 22 C -0.224 4.224 23 O -0.338 6.338 24 Si 0.695 3.305 25 C -0.140 4.140 26 H 0.080 0.920 27 H 0.150 0.850 28 H 0.077 0.923 29 H 0.107 0.893 30 H 0.149 0.851 31 H 0.123 0.877 32 H 0.077 0.923 33 H 0.123 0.877 34 H 0.191 0.809 35 H 0.170 0.830 36 H 0.120 0.880 37 H 0.229 0.771 38 H -0.161 1.161 39 H -0.208 1.208 40 H 0.165 0.835 41 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 1.669 -5.264 -4.022 6.832 hybrid contribution -0.400 1.476 0.825 1.737 sum 1.269 -3.788 -3.197 5.117 Atomic orbital electron populations 1.23556 0.75065 1.05774 1.02384 1.86509 1.24639 1.32532 1.83304 1.24083 0.92679 0.81245 0.71179 1.90701 1.67966 1.37692 1.46571 1.22666 0.85945 1.00069 1.02043 0.80089 1.22752 0.93488 0.96483 1.00730 1.32345 1.09600 1.15875 1.17749 0.79142 1.05861 0.73759 0.76047 0.75929 1.93637 1.51940 1.85588 1.63909 1.93642 1.71134 1.49163 1.81745 1.85656 1.27379 1.85155 1.63076 1.17845 0.82311 0.96057 1.02326 1.20288 0.93089 0.95053 0.95795 1.21215 1.02755 0.94936 1.00357 1.21178 0.94834 0.98772 0.96596 1.21134 0.88429 0.95638 0.98558 1.98429 1.21706 1.98601 1.82715 1.20951 0.92816 0.98482 1.01475 1.20575 0.96107 0.95611 0.97233 1.26230 1.02834 0.96666 0.96683 1.86739 1.82774 1.44930 1.19341 0.92401 0.80239 0.84511 0.73322 1.23016 0.95062 0.99527 0.96364 0.91979 0.85039 0.92331 0.89257 0.85146 0.87710 0.92308 0.87661 0.80889 0.82999 0.88014 0.77117 1.16060 1.20803 0.83536 0.88172 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.12 16 2 O -0.35 0.16 10.57 -51.48 -0.54 -0.39 16 3 C 0.46 0.61 7.49 71.24 0.53 1.15 16 4 O -0.54 -4.92 15.65 21.98 0.34 -4.58 16 5 C -0.09 0.59 4.26 -10.96 -0.05 0.54 16 6 H 0.18 -2.69 8.14 -2.39 -0.02 -2.70 16 7 C -0.10 0.42 7.00 31.12 0.22 0.64 16 8 C -0.65 3.50 2.86 31.12 0.09 3.59 16 9 H 0.19 -2.16 5.87 -2.38 -0.01 -2.17 16 10 S 2.58 8.63 4.91 -56.49 -0.28 8.35 16 11 O -0.95 -10.14 17.31 -118.57 -2.05 -12.19 16 12 O -0.96 -6.26 13.27 -118.57 -1.57 -7.84 16 13 O -0.65 -1.32 8.22 -61.79 -0.51 -1.83 16 14 C 0.06 0.11 4.92 22.50 0.11 0.22 16 15 C -0.04 -0.09 5.16 -19.77 -0.10 -0.19 16 16 C -0.14 -0.22 8.39 71.23 0.60 0.38 16 17 C -0.10 0.02 9.50 22.28 0.21 0.23 16 18 C -0.01 -0.01 6.32 22.33 0.14 0.13 16 19 Cl -0.04 -0.02 28.95 -2.72 -0.08 -0.10 16 20 C -0.12 -0.05 8.44 22.28 0.19 0.14 16 21 C -0.09 0.03 4.80 -19.77 -0.09 -0.06 16 22 C -0.12 0.55 1.88 71.24 0.13 0.69 16 23 O -0.53 1.43 12.63 -148.98 -1.88 -0.45 16 24 Si 0.80 -5.22 30.42 68.60 2.09 -3.13 16 25 C -0.10 0.74 6.66 31.18 0.21 0.95 16 26 H 0.06 -0.13 8.13 -2.39 -0.02 -0.15 16 27 H 0.13 -1.13 8.14 -2.38 -0.02 -1.15 16 28 H 0.06 -0.08 8.13 -2.39 -0.02 -0.10 16 29 H 0.09 0.04 7.39 -2.39 -0.02 0.02 16 30 H 0.13 -1.19 8.14 -2.39 -0.02 -1.21 16 31 H 0.10 0.33 6.72 -2.39 -0.02 0.31 16 32 H 0.06 0.18 7.26 -2.38 -0.02 0.17 16 33 H 0.10 -0.36 8.12 -2.38 -0.02 -0.38 16 34 H 0.17 -0.83 8.06 -2.91 -0.02 -0.85 16 35 H 0.15 -0.16 4.94 -2.91 -0.01 -0.17 16 36 H 0.10 -0.97 2.07 -2.39 0.00 -0.97 16 37 H 0.38 -2.19 8.81 -74.06 -0.65 -2.84 16 38 H -0.24 1.53 7.11 99.48 0.71 2.23 16 39 H -0.28 -0.05 6.79 99.48 0.68 0.62 16 40 H 0.15 -2.10 6.98 -2.38 -0.02 -2.12 16 41 H 0.10 -0.36 7.41 -2.39 -0.02 -0.38 16 Total: 0.00 -23.83 358.43 -0.63 -24.46 By element: Atomic # 1 Polarization: -12.31 SS G_CDS: 0.47 Total: -11.84 kcal Atomic # 6 Polarization: 6.15 SS G_CDS: 3.38 Total: 9.53 kcal Atomic # 8 Polarization: -21.06 SS G_CDS: -6.22 Total: -27.28 kcal Atomic # 14 Polarization: -5.22 SS G_CDS: 2.09 Total: -3.13 kcal Atomic # 16 Polarization: 8.63 SS G_CDS: -0.28 Total: 8.35 kcal Atomic # 17 Polarization: -0.02 SS G_CDS: -0.08 Total: -0.10 kcal Total: -23.83 -0.63 -24.46 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_8270826_13206342.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.122 kcal (2) G-P(sol) polarization free energy of solvation -23.828 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -150.950 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.629 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.457 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.578 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds