Wall clock time and date at job start Mon Mar 8 2021 13:21:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.45198 * 109.47325 * 2 1 4 4 C 1.34224 * 117.00379 * 179.97438 * 3 2 1 5 5 O 1.20828 * 119.99824 * 359.97438 * 4 3 2 6 6 C 1.50706 * 120.00350 * 180.02562 * 4 3 2 7 7 H 1.09004 * 112.84338 * 311.19335 * 6 4 3 8 8 C 1.53778 * 113.68987 * 82.46207 * 6 4 3 9 9 C 1.53785 * 87.07760 * 139.99445 * 8 6 4 10 10 F 1.39905 * 113.68778 * 220.00561 * 9 8 6 11 11 C 1.52995 * 113.61527 * 89.11811 * 9 8 6 12 12 S 1.81398 * 109.47453 * 82.49993 * 11 9 8 13 13 O 1.42098 * 110.54160 * 67.93915 * 12 11 9 14 14 O 1.42102 * 110.54046 * 291.18507 * 12 11 9 15 15 O 1.52199 * 104.44982 * 179.56409 * 12 11 9 16 16 C 1.35920 * 114.00572 * 76.20574 * 15 12 11 17 17 C 1.38704 * 120.04106 * 84.31854 * 16 15 12 18 18 C 1.50708 * 120.02278 * 0.02709 * 17 16 15 19 19 O 1.42900 * 109.47155 * 251.68420 * 18 17 16 20 20 Si 1.86293 * 109.47045 * 131.68168 * 18 17 16 21 21 C 1.38160 * 119.95855 * 180.25656 * 17 16 15 22 22 C 1.38345 * 120.03992 * 359.47642 * 21 17 16 23 23 Cl 1.73606 * 119.95833 * 180.25293 * 22 21 17 24 24 C 1.38380 * 120.08609 * 0.27313 * 22 21 17 25 25 C 1.38128 * 120.04376 * 359.97438 * 24 22 21 26 26 C 1.50702 * 120.02147 * 179.97438 * 25 24 22 27 27 C 1.53777 * 87.08115 * 334.56371 * 9 8 6 28 28 H 1.09000 * 109.47805 * 300.00619 * 1 2 3 29 29 H 1.09003 * 109.47010 * 59.99971 * 1 2 3 30 30 H 1.08995 * 109.47397 * 180.02562 * 1 2 3 31 31 H 1.08992 * 109.47281 * 239.99708 * 2 1 3 32 32 H 1.09004 * 109.46965 * 119.99242 * 2 1 3 33 33 H 1.08993 * 113.61895 * 25.44782 * 8 6 4 34 34 H 1.09005 * 113.61313 * 254.53974 * 8 6 4 35 35 H 1.08999 * 109.47274 * 322.49689 * 11 9 8 36 36 H 1.08998 * 109.46983 * 202.50043 * 11 9 8 37 37 H 1.08997 * 109.47100 * 11.68322 * 18 17 16 38 38 H 0.96703 * 114.00105 * 299.99713 * 19 18 17 39 39 H 1.48505 * 110.00164 * 180.02562 * 20 18 17 40 40 H 1.48507 * 110.00206 * 301.32103 * 20 18 17 41 41 H 1.08001 * 119.98041 * 179.74354 * 21 17 16 42 42 H 1.08005 * 119.98359 * 180.02562 * 24 22 21 43 43 H 1.09002 * 109.46428 * 96.03368 * 26 25 24 44 44 H 1.09001 * 109.47186 * 216.03311 * 26 25 24 45 45 H 1.08998 * 109.47176 * 336.04093 * 26 25 24 46 46 H 1.09004 * 113.61030 * 139.97897 * 27 9 8 47 47 H 1.08997 * 113.61737 * 270.88226 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0015 6 6 3.9207 2.9374 0.0012 7 1 3.4714 3.5816 -0.7547 8 6 3.9857 3.5786 1.3974 9 6 5.3561 4.1436 0.9878 10 9 6.3098 4.1017 2.0106 11 6 5.2763 5.5107 0.3056 12 16 5.1597 6.8098 1.5663 13 8 6.3740 6.9047 2.2982 14 8 3.9059 6.7475 2.2321 15 8 5.0985 8.1062 0.7713 16 6 3.8898 8.3466 0.1979 17 6 2.8813 8.9533 0.9319 18 6 3.1251 9.3471 2.3661 19 8 2.3965 8.4731 3.2305 20 14 2.5566 11.1009 2.6336 21 6 1.6517 9.1920 0.3490 22 6 1.4294 8.8362 -0.9693 23 17 -0.1144 9.1432 -1.7017 24 6 2.4359 8.2356 -1.7049 25 6 3.6650 7.9906 -1.1241 26 6 4.7606 7.3359 -1.9254 27 6 5.4582 2.9680 0.0018 28 1 -0.3635 0.5139 0.8899 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 1.8933 -0.5138 -0.8899 32 1 1.8933 -0.5137 0.8901 33 1 4.0375 2.8530 2.2091 34 1 3.2285 4.3454 1.5614 35 1 4.3952 5.5462 -0.3351 36 1 6.1705 5.6687 -0.2973 37 1 4.1897 9.2725 2.5874 38 1 1.4399 8.4877 3.0892 39 1 2.7921 11.5017 4.0440 40 1 3.2843 12.0160 1.7178 41 1 0.8649 9.6607 0.9215 42 1 2.2607 7.9588 -2.7341 43 1 5.4172 8.1024 -2.3370 44 1 5.3363 6.6727 -1.2798 45 1 4.3207 6.7593 -2.7391 46 1 5.8898 3.2420 -0.9610 47 1 5.9126 2.0755 0.4319 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_8270826_15494190.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:21:46 Heat of formation + Delta-G solvation = -198.767451 kcal Electronic energy + Delta-G solvation = -39291.788176 eV Core-core repulsion = 33897.808403 eV Total energy + Delta-G solvation = -5393.979772 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.078 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -49.15295 -42.71705 -41.93771 -39.72276 -39.61828 -38.52019 -37.97108 -37.63379 -37.45868 -37.20263 -34.33310 -32.76295 -31.99487 -31.55205 -28.40571 -27.40953 -27.25648 -26.99511 -24.32215 -24.02714 -22.50494 -22.40563 -21.79142 -20.54619 -19.93982 -19.36054 -18.91648 -18.76628 -18.22904 -18.01795 -17.71331 -17.31595 -17.14246 -16.99720 -16.74306 -16.21233 -16.18464 -15.93143 -15.50754 -15.45194 -15.09007 -14.89855 -14.85209 -14.59334 -14.51654 -14.32321 -14.19067 -14.01409 -13.82081 -13.77729 -13.70307 -13.63968 -13.45844 -13.32626 -13.23575 -13.03255 -12.85004 -12.80669 -12.72028 -12.63618 -12.48762 -12.43359 -12.20731 -12.12144 -11.99685 -11.81234 -11.58135 -11.52257 -11.45780 -10.55581 -9.93736 -9.85448 -5.16801 -1.36873 -0.28694 -0.12824 0.80534 0.97254 0.99479 1.12279 1.53079 1.58120 1.88143 2.12050 2.25707 2.54780 2.68672 2.75542 2.91163 3.11841 3.17074 3.25667 3.37440 3.46839 3.62628 3.72572 3.81340 3.90780 3.93791 3.96904 4.01348 4.03473 4.05891 4.11382 4.17041 4.31864 4.38136 4.42725 4.51866 4.55232 4.59132 4.66449 4.70526 4.82903 4.89747 4.90449 4.95378 4.97270 5.02510 5.07668 5.13256 5.40069 5.42897 6.58418 6.85983 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.355 6.355 4 C 0.473 3.527 5 O -0.536 6.536 6 C -0.096 4.096 7 H 0.176 0.824 8 C -0.153 4.153 9 C 0.089 3.911 10 F -0.206 7.206 11 C -0.659 4.659 12 S 2.572 3.428 13 O -0.966 6.966 14 O -0.920 6.920 15 O -0.664 6.664 16 C 0.041 3.959 17 C -0.082 4.082 18 C -0.089 4.089 19 O -0.522 6.522 20 Si 0.797 3.203 21 C -0.100 4.100 22 C -0.008 4.008 23 Cl -0.041 7.041 24 C -0.091 4.091 25 C -0.063 4.063 26 C -0.158 4.158 27 C -0.119 4.119 28 H 0.068 0.932 29 H 0.072 0.928 30 H 0.094 0.906 31 H 0.071 0.929 32 H 0.065 0.935 33 H 0.103 0.897 34 H 0.123 0.877 35 H 0.198 0.802 36 H 0.191 0.809 37 H 0.076 0.924 38 H 0.392 0.608 39 H -0.288 1.288 40 H -0.284 1.284 41 H 0.185 0.815 42 H 0.180 0.820 43 H 0.095 0.905 44 H 0.081 0.919 45 H 0.120 0.880 46 H 0.130 0.870 47 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.590 0.756 -9.308 12.688 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.271 6.271 4 C 0.317 3.683 5 O -0.425 6.425 6 C -0.115 4.115 7 H 0.193 0.807 8 C -0.190 4.190 9 C 0.070 3.930 10 F -0.186 7.186 11 C -0.785 4.785 12 S 2.669 3.331 13 O -0.965 6.965 14 O -0.918 6.918 15 O -0.624 6.624 16 C -0.001 4.001 17 C -0.085 4.085 18 C -0.197 4.197 19 O -0.329 6.329 20 Si 0.700 3.300 21 C -0.118 4.118 22 C -0.036 4.036 23 Cl -0.012 7.012 24 C -0.110 4.110 25 C -0.065 4.065 26 C -0.214 4.214 27 C -0.157 4.157 28 H 0.087 0.913 29 H 0.091 0.909 30 H 0.113 0.887 31 H 0.089 0.911 32 H 0.083 0.917 33 H 0.121 0.879 34 H 0.141 0.859 35 H 0.216 0.784 36 H 0.208 0.792 37 H 0.094 0.906 38 H 0.242 0.758 39 H -0.215 1.215 40 H -0.211 1.211 41 H 0.202 0.798 42 H 0.197 0.803 43 H 0.114 0.886 44 H 0.100 0.900 45 H 0.139 0.861 46 H 0.149 0.851 47 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -7.523 1.566 -8.247 11.272 hybrid contribution 1.319 -1.029 0.074 1.675 sum -6.204 0.536 -8.174 10.276 Atomic orbital electron populations 1.21828 0.90600 1.04244 1.03897 1.23280 0.96993 0.79221 1.02538 1.86514 1.23845 1.33542 1.83246 1.23711 0.80762 0.92522 0.71262 1.90697 1.61218 1.44100 1.46494 1.22452 0.96867 0.90947 1.01213 0.80703 1.23895 0.95884 1.02200 0.97032 1.21902 0.88761 0.94605 0.87729 1.92963 1.66836 1.97380 1.61431 1.31601 1.17239 1.10344 1.19357 1.06159 0.74650 0.75742 0.76512 1.93626 1.48990 1.84897 1.68955 1.93780 1.42268 1.84205 1.71570 1.85761 1.41445 1.60401 1.74745 1.18154 0.80743 1.07551 0.93673 1.20529 0.93805 0.97145 0.96989 1.25286 0.99322 1.07915 0.87181 1.86728 1.23997 1.65092 1.57044 0.94203 0.88348 0.69886 0.77580 1.21059 0.96300 1.00416 0.94037 1.21161 0.88992 0.99746 0.93682 1.98445 1.26454 1.94004 1.82294 1.21248 0.89667 0.98052 1.02015 1.20202 0.97064 0.98450 0.90832 1.21653 0.96350 1.02148 1.01219 1.23625 0.94058 0.96598 1.01419 0.91326 0.90859 0.88708 0.91054 0.91688 0.87851 0.85886 0.78421 0.79186 0.90606 0.75832 1.21501 1.21092 0.79786 0.80259 0.88627 0.90023 0.86130 0.85131 0.88110 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.77 10.29 71.98 0.74 1.51 16 2 C 0.05 -0.04 6.19 71.98 0.45 0.41 16 3 O -0.36 -0.31 10.22 -51.36 -0.52 -0.84 16 4 C 0.47 0.80 7.49 71.24 0.53 1.34 16 5 O -0.54 -4.59 15.65 21.96 0.34 -4.25 16 6 C -0.10 0.52 3.91 -11.01 -0.04 0.48 16 7 H 0.18 -2.44 7.65 -2.39 -0.02 -2.46 16 8 C -0.15 0.33 7.09 31.12 0.22 0.55 16 9 C 0.09 -0.08 1.79 -10.27 -0.02 -0.10 16 10 F -0.21 -1.69 16.29 44.97 0.73 -0.95 16 11 C -0.66 3.70 3.53 71.98 0.25 3.95 16 12 S 2.57 14.63 4.55 -56.49 -0.26 14.38 16 13 O -0.97 -15.54 17.51 -118.57 -2.08 -17.62 16 14 O -0.92 -6.92 12.52 -115.35 -1.44 -8.37 16 15 O -0.66 -2.70 8.38 -61.75 -0.52 -3.22 16 16 C 0.04 0.00 4.85 22.50 0.11 0.11 16 17 C -0.08 0.03 4.06 -19.77 -0.08 -0.05 16 18 C -0.09 -0.28 1.75 71.24 0.12 -0.16 16 19 O -0.52 -1.70 11.00 -128.02 -1.41 -3.11 16 20 Si 0.80 -0.75 31.21 68.60 2.14 1.39 16 21 C -0.10 0.64 8.33 22.28 0.19 0.83 16 22 C -0.01 0.06 6.32 22.33 0.14 0.20 16 23 Cl -0.04 0.29 28.95 -2.72 -0.08 0.21 16 24 C -0.09 0.86 9.45 22.28 0.21 1.07 16 25 C -0.06 0.44 5.34 -19.77 -0.11 0.33 16 26 C -0.16 1.98 8.98 71.24 0.64 2.61 16 27 C -0.12 0.49 6.89 31.12 0.21 0.70 16 28 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 29 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 30 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 31 H 0.07 -0.05 8.13 -2.39 -0.02 -0.07 16 32 H 0.06 0.03 8.13 -2.39 -0.02 0.01 16 33 H 0.10 0.01 8.10 -2.39 -0.02 0.00 16 34 H 0.12 -0.55 7.53 -2.38 -0.02 -0.56 16 35 H 0.20 -2.77 5.48 -2.39 -0.01 -2.78 16 36 H 0.19 -2.19 6.93 -2.39 -0.02 -2.21 16 37 H 0.08 0.66 6.54 -2.39 -0.02 0.64 16 38 H 0.39 -2.88 8.56 -74.06 -0.63 -3.51 16 39 H -0.29 -1.78 7.11 99.48 0.71 -1.08 16 40 H -0.28 -1.21 7.11 99.48 0.71 -0.50 16 41 H 0.19 -2.41 6.85 -2.91 -0.02 -2.43 16 42 H 0.18 -2.68 8.06 -2.91 -0.02 -2.70 16 43 H 0.10 -1.13 8.14 -2.39 -0.02 -1.15 16 44 H 0.08 -1.11 2.98 -2.39 -0.01 -1.11 16 45 H 0.12 -2.23 8.04 -2.39 -0.02 -2.25 16 46 H 0.13 -1.37 8.10 -2.39 -0.02 -1.39 16 47 H 0.10 0.07 7.44 -2.39 -0.02 0.05 16 Total: 0.00 -34.58 407.86 0.94 -33.64 By element: Atomic # 1 Polarization: -25.52 SS G_CDS: 0.46 Total: -25.06 kcal Atomic # 6 Polarization: 10.22 SS G_CDS: 3.57 Total: 13.80 kcal Atomic # 8 Polarization: -31.77 SS G_CDS: -5.63 Total: -37.40 kcal Atomic # 9 Polarization: -1.69 SS G_CDS: 0.73 Total: -0.95 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: 2.14 Total: 1.39 kcal Atomic # 16 Polarization: 14.63 SS G_CDS: -0.26 Total: 14.38 kcal Atomic # 17 Polarization: 0.29 SS G_CDS: -0.08 Total: 0.21 kcal Total: -34.58 0.94 -33.64 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_8270826_15494190.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -165.127 kcal (2) G-P(sol) polarization free energy of solvation -34.579 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -199.705 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.938 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.641 kcal (6) G-S(sol) free energy of system = (1) + (5) -198.767 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds