Wall clock time and date at job start Mon Mar 8 2021 13:45:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45196 * 109.47130 * 2 1 4 4 C 1.34228 * 116.99705 * 180.02562 * 3 2 1 5 5 O 1.20829 * 120.00558 * 359.97438 * 4 3 2 6 6 C 1.50699 * 120.00031 * 180.02562 * 4 3 2 7 7 H 1.08996 * 112.84954 * 48.80410 * 6 4 3 8 8 C 1.53785 * 113.61764 * 179.97438 * 6 4 3 9 9 C 1.53786 * 87.08171 * 140.06254 * 8 6 4 10 10 F 1.39901 * 113.60952 * 89.20181 * 9 8 6 11 11 C 1.52996 * 113.61299 * 220.01857 * 9 8 6 12 12 S 1.81403 * 109.47008 * 178.47138 * 11 9 8 13 13 O 1.42099 * 110.53988 * 63.06541 * 12 11 9 14 14 O 1.42098 * 110.54221 * 286.31403 * 12 11 9 15 15 O 1.52200 * 104.44863 * 174.68967 * 12 11 9 16 16 C 1.35922 * 114.00090 * 78.99079 * 15 12 11 17 17 C 1.38703 * 120.03764 * 89.31426 * 16 15 12 18 18 C 1.50694 * 120.02414 * 359.97438 * 17 16 15 19 19 O 1.42902 * 109.47312 * 252.71030 * 18 17 16 20 20 Si 1.86302 * 109.47060 * 132.71170 * 18 17 16 21 21 C 1.38163 * 119.95332 * 179.74668 * 17 16 15 22 22 C 1.38351 * 120.04111 * 0.55324 * 21 17 16 23 23 Cl 1.73602 * 119.95558 * 179.72551 * 22 21 17 24 24 C 1.38385 * 120.08340 * 359.69483 * 22 21 17 25 25 C 1.38115 * 120.04566 * 0.02950 * 24 22 21 26 26 C 1.50695 * 120.02356 * 180.02562 * 25 24 22 27 27 C 1.53780 * 87.17165 * 334.61007 * 9 8 6 28 28 H 1.09000 * 109.47259 * 59.99945 * 1 2 3 29 29 H 1.09001 * 109.47337 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47071 * 300.00343 * 1 2 3 31 31 H 1.09006 * 109.47048 * 239.99541 * 2 1 3 32 32 H 1.09004 * 109.46816 * 120.00281 * 2 1 3 33 33 H 1.08998 * 113.61232 * 25.51763 * 8 6 4 34 34 H 1.08993 * 113.61502 * 254.61586 * 8 6 4 35 35 H 1.08999 * 109.47163 * 58.47137 * 11 9 8 36 36 H 1.09000 * 109.47346 * 298.47081 * 11 9 8 37 37 H 1.08998 * 109.47241 * 12.70892 * 18 17 16 38 38 H 0.96704 * 113.99434 * 300.00035 * 19 18 17 39 39 H 1.48496 * 110.00111 * 58.68131 * 20 18 17 40 40 H 1.48498 * 109.99908 * 180.02562 * 20 18 17 41 41 H 1.08000 * 119.98372 * 180.27023 * 21 17 16 42 42 H 1.08002 * 119.97671 * 179.97438 * 24 22 21 43 43 H 1.09004 * 109.47500 * 276.05080 * 26 25 24 44 44 H 1.08997 * 109.47415 * 36.05392 * 26 25 24 45 45 H 1.09008 * 109.47519 * 156.05006 * 26 25 24 46 46 H 1.09002 * 113.61179 * 139.93839 * 27 9 8 47 47 H 1.09001 * 113.61706 * 270.83995 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5447 -0.0005 5 8 4.0808 0.5865 -0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.4716 3.5808 0.7564 8 6 5.4583 2.9679 -0.0001 9 6 5.3565 4.1442 -0.9855 10 9 5.2852 5.3939 -0.3608 11 6 6.3986 4.0979 -2.1048 12 16 6.1489 5.5053 -3.2218 13 8 6.3531 6.7311 -2.5327 14 8 4.9982 5.3021 -4.0303 15 8 7.3130 5.4256 -4.1991 16 6 7.1488 4.4994 -5.1803 17 6 6.5268 4.8505 -6.3693 18 6 6.0319 6.2590 -6.5741 19 8 4.6047 6.2774 -6.5046 20 14 6.5801 6.8729 -8.2455 21 6 6.3654 3.9090 -7.3676 22 6 6.8136 2.6140 -7.1773 23 17 6.6033 1.4310 -8.4303 24 6 7.4298 2.2607 -5.9896 25 6 7.5980 3.2004 -4.9916 26 6 8.2696 2.8152 -3.6987 27 6 3.9855 3.5818 -1.3966 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 -0.3633 0.5139 0.8899 31 1 1.8933 -0.5139 -0.8900 32 1 1.8933 -0.5139 0.8900 33 1 5.9128 2.0757 -0.4307 34 1 5.8896 3.2411 0.9629 35 1 6.2914 3.1677 -2.6627 36 1 7.3981 4.1496 -1.6730 37 1 6.4418 6.9047 -5.7975 38 1 4.1715 5.7233 -7.1683 39 1 6.0540 5.9826 -9.3112 40 1 6.0988 8.2613 -8.4595 41 1 5.8851 4.1829 -8.2953 42 1 7.7786 1.2491 -5.8428 43 1 7.5372 2.3644 -3.0290 44 1 9.0654 2.0987 -3.9020 45 1 8.6921 3.7040 -3.2298 46 1 3.2295 4.3500 -1.5594 47 1 4.0365 2.8577 -2.2098 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_8270826_16464788.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:45:42 Heat of formation + Delta-G solvation = -199.770797 kcal Electronic energy + Delta-G solvation = -39015.756597 eV Core-core repulsion = 33621.733316 eV Total energy + Delta-G solvation = -5394.023281 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.078 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -49.18714 -42.77879 -41.83956 -39.81674 -39.43543 -38.31157 -38.11307 -37.60637 -37.48863 -37.11584 -34.66850 -32.89850 -32.27057 -31.83562 -28.71625 -27.48943 -27.36264 -26.86581 -24.43854 -24.03728 -22.62370 -22.45955 -21.66140 -20.95385 -19.78725 -19.31932 -18.94504 -18.79372 -18.35445 -17.82414 -17.66601 -17.58603 -17.20113 -17.15352 -16.57329 -16.32741 -16.23105 -15.99448 -15.73807 -15.44729 -15.36556 -15.05495 -14.75151 -14.70795 -14.67534 -14.49124 -14.32346 -14.06077 -14.00808 -13.83245 -13.81234 -13.54195 -13.45946 -13.21482 -13.16058 -13.14212 -13.02998 -12.99906 -12.89727 -12.73136 -12.61241 -12.49221 -12.28326 -12.11099 -11.97184 -11.92207 -11.59909 -11.54239 -11.41730 -10.80650 -10.16550 -9.99787 -5.04671 -1.30070 -0.40815 -0.35239 0.73170 0.89684 1.01233 1.08814 1.47080 1.49891 1.80976 1.95896 2.35859 2.49978 2.61844 2.70364 2.80906 3.01240 3.03740 3.10136 3.13399 3.27914 3.42728 3.60238 3.64220 3.67751 3.74326 3.84888 3.87139 3.90005 3.93098 4.01467 4.07543 4.16731 4.20250 4.22520 4.24759 4.28501 4.43921 4.47955 4.53851 4.63385 4.65564 4.68422 4.71474 4.75085 4.76056 4.87419 4.96960 5.20822 5.36280 6.39676 6.61971 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.061 3.939 3 O -0.353 6.353 4 C 0.476 3.524 5 O -0.503 6.503 6 C -0.109 4.109 7 H 0.138 0.862 8 C -0.121 4.121 9 C 0.103 3.897 10 F -0.169 7.169 11 C -0.686 4.686 12 S 2.582 3.418 13 O -0.905 6.905 14 O -0.912 6.912 15 O -0.657 6.657 16 C 0.084 3.916 17 C -0.061 4.061 18 C -0.085 4.085 19 O -0.496 6.496 20 Si 0.693 3.307 21 C -0.107 4.107 22 C -0.007 4.007 23 Cl -0.045 7.045 24 C -0.094 4.094 25 C -0.074 4.074 26 C -0.150 4.150 27 C -0.145 4.145 28 H 0.068 0.932 29 H 0.082 0.918 30 H 0.068 0.932 31 H 0.072 0.928 32 H 0.072 0.928 33 H 0.121 0.879 34 H 0.102 0.898 35 H 0.162 0.838 36 H 0.158 0.842 37 H 0.114 0.886 38 H 0.373 0.627 39 H -0.248 1.248 40 H -0.244 1.244 41 H 0.151 0.849 42 H 0.154 0.846 43 H 0.093 0.907 44 H 0.095 0.905 45 H 0.082 0.918 46 H 0.109 0.891 47 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.772 -5.098 -1.206 5.530 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.391 6.391 6 C -0.128 4.128 7 H 0.156 0.844 8 C -0.159 4.159 9 C 0.084 3.916 10 F -0.149 7.149 11 C -0.809 4.809 12 S 2.674 3.326 13 O -0.903 6.903 14 O -0.910 6.910 15 O -0.616 6.616 16 C 0.042 3.958 17 C -0.064 4.064 18 C -0.194 4.194 19 O -0.302 6.302 20 Si 0.591 3.409 21 C -0.126 4.126 22 C -0.035 4.035 23 Cl -0.016 7.016 24 C -0.112 4.112 25 C -0.077 4.077 26 C -0.206 4.206 27 C -0.183 4.183 28 H 0.087 0.913 29 H 0.101 0.899 30 H 0.087 0.913 31 H 0.090 0.910 32 H 0.090 0.910 33 H 0.139 0.861 34 H 0.121 0.879 35 H 0.180 0.820 36 H 0.176 0.824 37 H 0.132 0.868 38 H 0.220 0.780 39 H -0.172 1.172 40 H -0.168 1.168 41 H 0.168 0.832 42 H 0.171 0.829 43 H 0.111 0.889 44 H 0.113 0.887 45 H 0.101 0.899 46 H 0.128 0.872 47 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 1.699 -4.062 -1.815 4.762 hybrid contribution -0.754 -1.232 0.632 1.577 sum 0.945 -5.294 -1.183 5.506 Atomic orbital electron populations 1.21830 0.92197 1.03336 1.03795 1.23126 0.95748 0.79600 1.02814 1.86524 1.24015 1.32969 1.83460 1.23210 0.80898 0.91800 0.72264 1.90685 1.60540 1.42722 1.45113 1.22506 0.97213 0.92078 1.01044 0.84407 1.23583 0.93750 0.97679 1.00896 1.21184 0.95321 0.82274 0.92867 1.93028 1.96995 1.41482 1.83386 1.31898 1.09558 1.24964 1.14489 1.06167 0.74222 0.76666 0.75533 1.93699 1.83792 1.38536 1.74283 1.93774 1.48703 1.86072 1.62494 1.85758 1.67067 1.61357 1.47413 1.17556 1.04595 0.85862 0.87743 1.20336 0.96299 0.97713 0.92011 1.25101 0.85608 0.94110 1.14619 1.86829 1.14616 1.70516 1.58210 0.94711 0.91844 0.81103 0.73244 1.20904 1.00832 0.91048 0.99780 1.20996 1.00234 0.90910 0.91366 1.98433 1.95652 1.56384 1.51122 1.20887 0.99087 1.00439 0.90815 1.19975 0.98494 0.90936 0.98258 1.21519 1.01659 1.04055 0.93374 1.23819 0.96126 1.01821 0.96507 0.91270 0.89926 0.91287 0.91008 0.90972 0.86107 0.87947 0.82035 0.82442 0.86820 0.77955 1.17169 1.16783 0.83194 0.82882 0.88935 0.88653 0.89907 0.87212 0.86652 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.30 10.29 37.16 0.38 0.68 16 2 C 0.06 -0.02 6.19 37.16 0.23 0.21 16 3 O -0.35 -0.40 10.22 -39.25 -0.40 -0.80 16 4 C 0.48 0.52 7.49 36.01 0.27 0.79 16 5 O -0.50 -1.64 15.65 -18.75 -0.29 -1.94 16 6 C -0.11 0.12 4.24 -90.86 -0.38 -0.27 16 7 H 0.14 -0.32 8.14 -51.93 -0.42 -0.74 16 8 C -0.12 0.23 6.86 -25.91 -0.18 0.05 16 9 C 0.10 -0.07 1.60 -89.81 -0.14 -0.21 16 10 F -0.17 -0.36 16.13 2.25 0.04 -0.32 16 11 C -0.69 1.38 3.58 37.16 0.13 1.51 16 12 S 2.58 5.36 4.86 -107.50 -0.52 4.84 16 13 O -0.90 -5.39 17.28 -67.04 -1.16 -6.55 16 14 O -0.91 -3.14 14.13 -69.76 -0.99 -4.13 16 15 O -0.66 -0.71 7.94 -51.82 -0.41 -1.12 16 16 C 0.08 0.02 4.73 -39.22 -0.19 -0.17 16 17 C -0.06 -0.02 4.12 -104.48 -0.43 -0.45 16 18 C -0.09 -0.09 1.97 36.00 0.07 -0.02 16 19 O -0.50 -1.14 11.53 -52.71 -0.61 -1.75 16 20 Si 0.69 -0.61 31.45 -169.99 -5.35 -5.96 16 21 C -0.11 0.11 8.37 -39.57 -0.33 -0.22 16 22 C -0.01 0.01 6.32 -39.49 -0.25 -0.24 16 23 Cl -0.05 0.05 28.95 -51.86 -1.50 -1.46 16 24 C -0.09 0.23 9.50 -39.57 -0.38 -0.15 16 25 C -0.07 0.15 5.52 -104.48 -0.58 -0.43 16 26 C -0.15 0.67 7.85 36.00 0.28 0.96 16 27 C -0.15 0.17 7.09 -25.83 -0.18 -0.01 16 28 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 30 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.07 -0.04 8.13 -51.93 -0.42 -0.46 16 32 H 0.07 -0.02 8.13 -51.93 -0.42 -0.45 16 33 H 0.12 -0.31 7.40 -51.93 -0.38 -0.69 16 34 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 35 H 0.16 -0.75 4.97 -51.92 -0.26 -1.01 16 36 H 0.16 -0.72 7.17 -51.92 -0.37 -1.09 16 37 H 0.11 0.20 6.83 -51.93 -0.35 -0.16 16 38 H 0.37 -0.53 8.60 45.56 0.39 -0.14 16 39 H -0.25 0.12 6.53 56.52 0.37 0.49 16 40 H -0.24 -0.51 7.11 56.52 0.40 -0.11 16 41 H 0.15 -0.35 6.40 -52.49 -0.34 -0.69 16 42 H 0.15 -0.70 8.06 -52.49 -0.42 -1.12 16 43 H 0.09 -0.57 5.41 -51.93 -0.28 -0.85 16 44 H 0.09 -0.55 8.12 -51.93 -0.42 -0.97 16 45 H 0.08 -0.39 6.40 -51.92 -0.33 -0.72 16 46 H 0.11 -0.14 8.14 -51.93 -0.42 -0.57 16 47 H 0.12 -0.28 7.94 -51.93 -0.41 -0.69 16 LS Contribution 409.92 15.07 6.18 6.18 Total: 0.00 -10.90 409.92 -12.48 -23.38 By element: Atomic # 1 Polarization: -6.62 SS G_CDS: -5.79 Total: -12.41 kcal Atomic # 6 Polarization: 3.70 SS G_CDS: -1.67 Total: 2.03 kcal Atomic # 8 Polarization: -12.42 SS G_CDS: -3.86 Total: -16.28 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.35 Total: -5.96 kcal Atomic # 16 Polarization: 5.36 SS G_CDS: -0.52 Total: 4.84 kcal Atomic # 17 Polarization: 0.05 SS G_CDS: -1.50 Total: -1.46 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -10.90 -12.48 -23.38 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_8270826_16464788.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -176.390 kcal (2) G-P(sol) polarization free energy of solvation -10.902 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -187.292 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.479 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.381 kcal (6) G-S(sol) free energy of system = (1) + (5) -199.771 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds