Wall clock time and date at job start Mon Mar 8 2021 12:16:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.45198 * 109.47533 * 2 1 4 4 C 1.34225 * 116.99943 * 180.02562 * 3 2 1 5 5 O 1.20827 * 120.00488 * 0.02562 * 4 3 2 6 6 C 1.50703 * 119.99762 * 180.02562 * 4 3 2 7 7 H 1.08996 * 112.85169 * 48.80051 * 6 4 3 8 8 C 1.53781 * 113.61417 * 180.02562 * 6 4 3 9 9 C 1.53786 * 87.17350 * 139.93966 * 8 6 4 10 10 F 1.39897 * 113.61259 * 220.06188 * 9 8 6 11 11 C 1.52993 * 113.61559 * 89.15694 * 9 8 6 12 12 S 1.81398 * 109.47175 * 185.00129 * 11 9 8 13 13 O 1.42106 * 110.54507 * 291.62644 * 12 11 9 14 14 O 1.42099 * 110.54292 * 68.37425 * 12 11 9 15 15 O 1.52199 * 104.44952 * 180.02562 * 12 11 9 16 16 C 1.35898 * 113.99984 * 75.00418 * 15 12 11 17 17 C 1.38674 * 120.03514 * 269.72079 * 16 15 12 18 18 C 1.38394 * 119.91462 * 179.73008 * 17 16 15 19 19 F 1.35097 * 119.99178 * 180.31821 * 18 17 16 20 20 C 1.38469 * 120.00423 * 0.56899 * 18 17 16 21 21 C 1.38249 * 120.08592 * 359.70353 * 20 18 17 22 22 C 1.50705 * 119.96120 * 180.02562 * 21 20 18 23 23 O 1.42898 * 109.47283 * 244.98243 * 22 21 20 24 24 Si 1.86304 * 109.46981 * 4.97868 * 22 21 20 25 25 C 1.38133 * 120.08133 * 0.02562 * 21 20 18 26 26 C 1.53782 * 113.61283 * 277.49868 * 6 4 3 27 27 H 1.08998 * 109.47169 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.46271 * 299.99875 * 1 2 3 29 29 H 1.08997 * 109.47103 * 59.99513 * 1 2 3 30 30 H 1.09007 * 109.46820 * 240.00172 * 2 1 3 31 31 H 1.09002 * 109.47355 * 120.00874 * 2 1 3 32 32 H 1.09002 * 113.61445 * 254.52965 * 8 6 4 33 33 H 1.09002 * 113.61408 * 25.34696 * 8 6 4 34 34 H 1.08998 * 109.47564 * 305.00195 * 11 9 8 35 35 H 1.08999 * 109.47209 * 65.00143 * 11 9 8 36 36 H 1.07995 * 120.04176 * 0.02562 * 17 16 15 37 37 H 1.08001 * 119.95614 * 179.72587 * 20 18 17 38 38 H 1.08998 * 109.47598 * 124.97956 * 22 21 20 39 39 H 0.96706 * 114.00187 * 59.99223 * 23 22 21 40 40 H 1.48501 * 109.99918 * 58.68283 * 24 22 21 41 41 H 1.48499 * 110.00026 * 180.02562 * 24 22 21 42 42 H 1.08005 * 120.00183 * 180.02562 * 25 21 20 43 43 H 1.08997 * 113.61668 * 334.56418 * 26 6 4 44 44 H 1.08998 * 113.61674 * 105.38927 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5447 -0.0005 5 8 4.0809 0.5865 -0.0015 6 6 3.9209 2.9372 0.0000 7 1 3.4717 3.5808 0.7564 8 6 5.4584 2.9679 -0.0013 9 6 5.3583 4.1425 -0.9889 10 9 6.3107 4.0966 -2.0126 11 6 5.2808 5.5105 -0.3083 12 16 5.0182 6.7953 -1.5616 13 8 6.1712 6.9367 -2.3802 14 8 3.7233 6.6758 -2.1345 15 8 4.9601 8.0931 -0.7686 16 6 6.1705 8.5261 -0.3278 17 6 6.6408 8.1259 0.9139 18 6 7.8762 8.5638 1.3580 19 9 8.3387 8.1697 2.5646 20 6 8.6359 9.4101 0.5679 21 6 8.1647 9.8137 -0.6675 22 6 8.9940 10.7343 -1.5253 23 8 8.3163 11.9831 -1.6773 24 14 10.6462 11.0195 -0.7128 25 6 6.9345 9.3743 -1.1167 26 6 3.9858 3.5776 -1.3967 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3632 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 1.8933 -0.5138 -0.8901 31 1 1.8934 -0.5140 0.8899 32 1 5.8905 3.2422 0.9610 33 1 5.9125 2.0745 -0.4300 34 1 4.4516 5.5180 0.3990 35 1 6.2127 5.7056 0.2223 36 1 6.0458 7.4694 1.5314 37 1 9.5979 9.7549 0.9172 38 1 9.1444 10.2809 -2.5050 39 1 8.1485 12.4437 -0.8437 40 1 11.3476 9.7248 -0.5201 41 1 11.4734 11.9263 -1.5486 42 1 6.5678 9.6901 -2.0822 43 1 4.0375 2.8515 -2.2079 44 1 3.2278 4.3433 -1.5616 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_8925532_15494190.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:16:16 Heat of formation + Delta-G solvation = -244.560626 kcal Electronic energy + Delta-G solvation = -35529.936578 eV Core-core repulsion = 30179.854500 eV Total energy + Delta-G solvation = -5350.082078 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.092 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -50.29384 -49.08552 -42.53505 -41.91906 -39.99774 -39.69201 -38.48437 -37.61797 -37.54417 -37.35124 -33.08397 -32.82697 -31.76543 -31.67511 -27.56923 -27.46725 -27.12838 -25.21951 -24.15369 -23.53539 -22.42325 -21.81347 -20.62056 -19.93687 -19.46659 -19.17447 -18.88038 -18.28598 -18.06066 -17.99863 -17.75827 -17.54702 -17.27971 -17.08844 -16.99019 -16.58003 -16.29911 -16.26859 -16.15969 -15.69516 -15.53356 -15.37586 -14.95292 -14.58020 -14.38139 -14.33856 -14.26766 -14.16988 -13.87174 -13.82481 -13.45805 -13.41422 -13.39686 -13.36768 -13.18006 -13.15593 -13.02801 -12.87659 -12.64997 -12.56443 -12.34829 -12.18420 -12.11478 -11.60608 -11.59455 -11.49062 -10.78261 -10.51538 -10.20642 -5.21726 -1.45631 -0.54465 -0.40074 0.66322 1.00806 1.05107 1.47240 1.47701 1.79931 1.84750 2.12086 2.42623 2.48267 2.64316 2.71761 2.80003 2.97087 3.01639 3.04370 3.23028 3.32208 3.37759 3.43629 3.62656 3.67341 3.69413 3.77898 3.89987 3.93260 3.95527 4.14883 4.23549 4.23829 4.30615 4.32153 4.35537 4.39136 4.47202 4.50682 4.61192 4.66678 4.75579 4.78452 4.83867 4.97221 5.25630 5.36233 6.34909 6.61625 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.475 3.525 5 O -0.500 6.500 6 C -0.108 4.108 7 H 0.136 0.864 8 C -0.120 4.120 9 C 0.103 3.897 10 F -0.178 7.178 11 C -0.672 4.672 12 S 2.595 3.405 13 O -0.926 6.926 14 O -0.907 6.907 15 O -0.656 6.656 16 C 0.094 3.906 17 C -0.168 4.168 18 C 0.131 3.869 19 F -0.120 7.120 20 C -0.132 4.132 21 C -0.071 4.071 22 C -0.073 4.073 23 O -0.532 6.532 24 Si 0.689 3.311 25 C -0.070 4.070 26 C -0.152 4.152 27 H 0.082 0.918 28 H 0.068 0.932 29 H 0.069 0.931 30 H 0.072 0.928 31 H 0.072 0.928 32 H 0.099 0.901 33 H 0.121 0.879 34 H 0.164 0.836 35 H 0.155 0.845 36 H 0.158 0.842 37 H 0.154 0.846 38 H 0.127 0.873 39 H 0.382 0.618 40 H -0.251 1.251 41 H -0.247 1.247 42 H 0.154 0.846 43 H 0.117 0.883 44 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.592 2.041 6.052 6.415 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.317 3.683 5 O -0.387 6.387 6 C -0.127 4.127 7 H 0.154 0.846 8 C -0.159 4.159 9 C 0.083 3.917 10 F -0.158 7.158 11 C -0.796 4.796 12 S 2.687 3.313 13 O -0.924 6.924 14 O -0.905 6.905 15 O -0.614 6.614 16 C 0.052 3.948 17 C -0.189 4.189 18 C 0.112 3.888 19 F -0.099 7.099 20 C -0.151 4.151 21 C -0.072 4.072 22 C -0.183 4.183 23 O -0.338 6.338 24 Si 0.589 3.411 25 C -0.091 4.091 26 C -0.189 4.189 27 H 0.101 0.899 28 H 0.087 0.913 29 H 0.088 0.912 30 H 0.091 0.909 31 H 0.090 0.910 32 H 0.118 0.882 33 H 0.139 0.861 34 H 0.182 0.818 35 H 0.173 0.827 36 H 0.175 0.825 37 H 0.171 0.829 38 H 0.145 0.855 39 H 0.230 0.770 40 H -0.176 1.176 41 H -0.171 1.171 42 H 0.172 0.828 43 H 0.135 0.865 44 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 0.232 1.841 4.779 5.126 hybrid contribution -0.405 -1.175 0.426 1.314 sum -0.173 0.666 5.205 5.250 Atomic orbital electron populations 1.21830 0.92152 1.03369 1.03775 1.23137 0.95749 0.79529 1.02887 1.86509 1.23916 1.33057 1.83534 1.23103 0.80951 0.91723 0.72493 1.90708 1.60531 1.42656 1.44772 1.22280 0.97219 0.92347 1.00849 0.84607 1.23606 0.93590 0.98094 1.00588 1.21527 0.89067 0.93274 0.87834 1.93009 1.65751 1.97191 1.59837 1.31294 1.14644 1.13202 1.20444 1.05677 0.75390 0.74784 0.75418 1.93705 1.51881 1.82422 1.64433 1.93685 1.39512 1.84216 1.73097 1.85788 1.38801 1.58275 1.78560 1.17629 0.81503 1.01336 0.94321 1.21270 0.96735 1.04761 0.96122 1.17008 0.92411 0.97086 0.82311 1.91607 1.88247 1.89005 1.41018 1.21291 1.01081 0.98436 0.94266 1.20164 0.94881 0.97895 0.94241 1.25218 1.04386 0.84830 1.03886 1.86573 1.80042 1.31494 1.35678 0.94911 0.74953 0.83562 0.87650 1.21288 0.93101 0.94144 1.00535 1.23931 0.95850 1.02306 0.96822 0.89900 0.91317 0.91234 0.90945 0.90966 0.88203 0.86062 0.81849 0.82745 0.82465 0.82881 0.85526 0.77043 1.17602 1.17110 0.82802 0.86451 0.86834 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.30 10.29 37.16 0.38 0.68 16 2 C 0.06 -0.01 6.19 37.16 0.23 0.22 16 3 O -0.35 -0.37 10.22 -39.24 -0.40 -0.77 16 4 C 0.48 0.59 7.48 36.01 0.27 0.85 16 5 O -0.50 -2.02 15.65 -18.75 -0.29 -2.31 16 6 C -0.11 0.19 3.91 -90.96 -0.36 -0.17 16 7 H 0.14 -0.64 7.63 -51.93 -0.40 -1.04 16 8 C -0.12 0.20 6.88 -25.92 -0.18 0.02 16 9 C 0.10 -0.08 1.75 -89.73 -0.16 -0.23 16 10 F -0.18 -0.40 16.54 2.25 0.04 -0.36 16 11 C -0.67 1.98 5.05 37.15 0.19 2.16 16 12 S 2.59 2.48 4.92 -107.50 -0.53 1.95 16 13 O -0.93 -3.33 15.82 -67.04 -1.06 -4.39 16 14 O -0.91 -3.19 16.98 -67.03 -1.14 -4.32 16 15 O -0.66 -0.14 10.05 -51.74 -0.52 -0.66 16 16 C 0.09 -0.03 4.79 -39.23 -0.19 -0.21 16 17 C -0.17 0.39 8.44 -39.36 -0.33 0.05 16 18 C 0.13 -0.26 7.30 -39.44 -0.29 -0.55 16 19 F -0.12 0.17 17.27 2.25 0.04 0.21 16 20 C -0.13 0.34 8.64 -39.49 -0.34 0.00 16 21 C -0.07 0.11 5.35 -104.65 -0.56 -0.45 16 22 C -0.07 0.14 2.80 36.01 0.10 0.24 16 23 O -0.53 0.87 12.83 -35.23 -0.45 0.42 16 24 Si 0.69 -1.98 29.80 -169.99 -5.07 -7.05 16 25 C -0.07 0.00 8.68 -39.43 -0.34 -0.34 16 26 C -0.15 0.15 7.05 -25.84 -0.18 -0.03 16 27 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 28 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 30 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 31 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 32 H 0.10 -0.37 8.10 -51.93 -0.42 -0.79 16 33 H 0.12 -0.02 7.43 -51.93 -0.39 -0.41 16 34 H 0.16 -1.09 7.33 -51.93 -0.38 -1.47 16 35 H 0.15 -0.78 6.62 -51.92 -0.34 -1.13 16 36 H 0.16 -0.84 7.52 -52.49 -0.39 -1.24 16 37 H 0.15 -0.73 4.90 -52.49 -0.26 -0.99 16 38 H 0.13 -0.19 7.96 -51.93 -0.41 -0.60 16 39 H 0.38 -2.23 8.70 45.56 0.40 -1.83 16 40 H -0.25 0.15 7.11 56.52 0.40 0.55 16 41 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 42 H 0.15 0.00 8.06 -52.48 -0.42 -0.43 16 43 H 0.12 -0.11 8.09 -51.93 -0.42 -0.53 16 44 H 0.11 -0.19 6.97 -51.93 -0.36 -0.55 16 LS Contribution 388.90 15.07 5.86 5.86 Total: 0.00 -11.62 388.90 -10.39 -22.01 By element: Atomic # 1 Polarization: -7.73 SS G_CDS: -5.11 Total: -12.84 kcal Atomic # 6 Polarization: 4.01 SS G_CDS: -1.75 Total: 2.25 kcal Atomic # 8 Polarization: -8.17 SS G_CDS: -3.86 Total: -12.04 kcal Atomic # 9 Polarization: -0.23 SS G_CDS: 0.08 Total: -0.15 kcal Atomic # 14 Polarization: -1.98 SS G_CDS: -5.07 Total: -7.05 kcal Atomic # 16 Polarization: 2.48 SS G_CDS: -0.53 Total: 1.95 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -11.62 -10.39 -22.01 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_8925532_15494190.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -222.554 kcal (2) G-P(sol) polarization free energy of solvation -11.619 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -234.173 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.388 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.007 kcal (6) G-S(sol) free energy of system = (1) + (5) -244.561 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds