Wall clock time and date at job start Mon Mar 8 2021 12:30:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.45208 * 109.46666 * 2 1 4 4 C 1.34232 * 116.99618 * 180.02562 * 3 2 1 5 5 O 1.20826 * 120.00236 * 359.97438 * 4 3 2 6 6 C 1.50697 * 120.00079 * 180.02562 * 4 3 2 7 7 H 1.08998 * 109.46862 * 300.00390 * 6 4 3 8 8 C 1.53006 * 109.47239 * 59.99547 * 6 4 3 9 9 C 1.52997 * 109.47164 * 180.02562 * 8 6 4 10 10 C 1.53002 * 109.46978 * 299.99874 * 9 8 6 11 11 F 1.39902 * 109.46894 * 179.97438 * 10 9 8 12 12 C 1.52993 * 109.47392 * 299.99957 * 10 9 8 13 13 S 1.81400 * 109.47353 * 305.00254 * 12 10 9 14 14 O 1.42098 * 110.54140 * 291.62383 * 13 12 10 15 15 O 1.42100 * 110.54383 * 68.37428 * 13 12 10 16 16 O 1.52197 * 104.44888 * 179.97438 * 13 12 10 17 17 C 1.35895 * 114.00401 * 74.99720 * 16 13 12 18 18 C 1.38672 * 120.04102 * 89.99800 * 17 16 13 19 19 C 1.38388 * 119.92229 * 179.97438 * 18 17 16 20 20 F 1.35096 * 119.99998 * 179.97438 * 19 18 17 21 21 C 1.38475 * 120.00063 * 0.02562 * 19 18 17 22 22 C 1.38254 * 120.08752 * 359.97438 * 21 19 18 23 23 C 1.50702 * 119.95613 * 180.02562 * 22 21 19 24 24 O 1.42900 * 109.46558 * 244.99412 * 23 22 21 25 25 Si 1.86292 * 109.47466 * 4.99281 * 23 22 21 26 26 C 1.38136 * 120.07938 * 359.73943 * 22 21 19 27 27 C 1.52996 * 109.46891 * 60.00410 * 10 9 8 28 28 C 1.52997 * 109.47466 * 179.97438 * 6 4 3 29 29 H 1.09003 * 109.46618 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.46939 * 299.99720 * 1 2 3 31 31 H 1.08992 * 109.47077 * 59.99823 * 1 2 3 32 32 H 1.08998 * 109.46939 * 240.00280 * 2 1 3 33 33 H 1.08996 * 109.47314 * 119.99461 * 2 1 3 34 34 H 1.09001 * 109.47002 * 60.00070 * 8 6 4 35 35 H 1.09000 * 109.47050 * 300.00336 * 8 6 4 36 36 H 1.09002 * 109.47045 * 180.02562 * 9 8 6 37 37 H 1.09001 * 109.47375 * 59.99966 * 9 8 6 38 38 H 1.09005 * 109.46770 * 65.00196 * 12 10 9 39 39 H 1.08999 * 109.47318 * 184.99883 * 12 10 9 40 40 H 1.08002 * 120.03962 * 359.95480 * 18 17 16 41 41 H 1.08005 * 119.95178 * 179.97438 * 21 19 18 42 42 H 1.08998 * 109.47030 * 125.00107 * 23 22 21 43 43 H 0.96694 * 114.00359 * 60.00291 * 24 23 22 44 44 H 1.48495 * 110.00067 * 180.02562 * 25 23 22 45 45 H 1.48497 * 110.00525 * 301.32322 * 25 23 22 46 46 H 1.07999 * 120.00018 * 180.28214 * 26 22 21 47 47 H 1.09004 * 109.47368 * 179.97438 * 27 10 9 48 48 H 1.09001 * 109.47372 * 59.99964 * 27 10 9 49 49 H 1.09002 * 109.47153 * 59.99773 * 28 6 4 50 50 H 1.09001 * 109.46832 * 299.99964 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3691 0.0000 4 6 3.3447 1.5450 -0.0005 5 8 4.0808 0.5868 -0.0005 6 6 3.9207 2.9375 0.0000 7 1 3.5843 3.4702 -0.8895 8 6 3.4497 3.6838 1.2499 9 6 4.0339 5.0978 1.2501 10 6 5.5619 5.0183 1.2492 11 9 6.0961 6.3113 1.2488 12 6 6.0345 4.2710 2.4977 13 16 5.3528 5.0716 3.9759 14 8 5.9344 6.3549 4.1610 15 8 3.9449 4.8897 4.0371 16 8 5.8884 4.2453 5.1364 17 6 7.2013 4.4636 5.4110 18 6 7.5669 5.4497 6.3148 19 6 8.9045 5.6695 6.5930 20 9 9.2625 6.6302 7.4728 21 6 9.8762 4.9055 5.9688 22 6 9.5120 3.9223 5.0677 23 6 10.5719 3.0922 4.3905 24 8 10.5583 3.3560 2.9861 25 14 12.2430 3.5290 5.0883 26 6 8.1775 3.6959 4.7919 27 6 6.0329 4.2721 -0.0007 28 6 5.4486 2.8575 -0.0001 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8899 32 1 1.8933 -0.5138 -0.8900 33 1 1.8934 -0.5137 0.8900 34 1 3.7860 3.1512 2.1395 35 1 2.3611 3.7408 1.2504 36 1 3.6987 5.6293 2.1408 37 1 3.6973 5.6303 0.3606 38 1 5.6919 3.2371 2.4538 39 1 7.1234 4.2913 2.5430 40 1 6.8085 6.0457 6.8008 41 1 10.9200 5.0780 6.1862 42 1 10.3709 2.0349 4.5634 43 1 10.7302 4.2798 2.7578 44 1 13.2970 2.7176 4.4281 45 1 12.5153 4.9749 4.8871 46 1 7.8942 2.9245 4.0912 47 1 7.1214 4.2157 -0.0017 48 1 5.6962 4.8045 -0.8903 49 1 5.7845 2.3257 -0.8903 50 1 5.7846 2.3250 0.8896 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_8925532_16464696.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:30:56 Heat of formation + Delta-G solvation = -278.950140 kcal Electronic energy + Delta-G solvation = -41477.011407 eV Core-core repulsion = 35814.362850 eV Total energy + Delta-G solvation = -5662.648557 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.123 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -50.17862 -49.06120 -42.51105 -41.83769 -40.04104 -39.71301 -38.43879 -37.73092 -37.60718 -37.34316 -33.66883 -32.94230 -32.60747 -32.23848 -31.73153 -29.40342 -27.44616 -25.50587 -25.14007 -24.33434 -23.70930 -23.53651 -22.04009 -21.75369 -20.60296 -19.73891 -19.23802 -19.05842 -18.75656 -18.44453 -18.08671 -17.87104 -17.74534 -17.61956 -17.39855 -17.14694 -16.94872 -16.78011 -16.35137 -16.25892 -16.10009 -15.78462 -15.49776 -15.33240 -15.09792 -15.05321 -14.55929 -14.43163 -14.35336 -14.23812 -14.13673 -13.87654 -13.82350 -13.68564 -13.46094 -13.38792 -13.30765 -13.26110 -13.23973 -13.09412 -12.92472 -12.91585 -12.80433 -12.57396 -12.44338 -12.43623 -12.05008 -12.00575 -11.75659 -11.53758 -11.37002 -11.27740 -10.98071 -10.48664 -10.20904 -5.16663 -1.37836 -0.44433 -0.42960 0.70553 1.00801 1.12781 1.38903 1.56640 1.75445 1.84549 2.22409 2.54618 2.71879 2.72913 2.94115 2.97468 3.01227 3.14564 3.20659 3.29552 3.36925 3.42771 3.52964 3.57457 3.64707 3.71656 3.81623 3.85931 3.93058 3.97011 4.01055 4.03944 4.10776 4.12449 4.26279 4.29613 4.36823 4.44968 4.45964 4.54564 4.61218 4.61997 4.68120 4.69764 4.70905 4.73642 4.78415 4.80610 4.94056 4.99955 5.03253 5.29367 5.43144 6.09489 6.68906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.466 3.534 5 O -0.505 6.505 6 C -0.087 4.087 7 H 0.119 0.881 8 C -0.108 4.108 9 C -0.170 4.170 10 C 0.142 3.858 11 F -0.190 7.190 12 C -0.692 4.692 13 S 2.591 3.409 14 O -0.930 6.930 15 O -0.909 6.909 16 O -0.658 6.658 17 C 0.095 3.905 18 C -0.121 4.121 19 C 0.134 3.866 20 F -0.119 7.119 21 C -0.136 4.136 22 C -0.071 4.071 23 C -0.077 4.077 24 O -0.524 6.524 25 Si 0.688 3.312 26 C -0.117 4.117 27 C -0.127 4.127 28 C -0.108 4.108 29 H 0.081 0.919 30 H 0.068 0.932 31 H 0.068 0.932 32 H 0.071 0.929 33 H 0.071 0.929 34 H 0.074 0.926 35 H 0.099 0.901 36 H 0.094 0.906 37 H 0.104 0.896 38 H 0.161 0.839 39 H 0.153 0.847 40 H 0.159 0.841 41 H 0.154 0.846 42 H 0.130 0.870 43 H 0.380 0.620 44 H -0.249 1.249 45 H -0.254 1.254 46 H 0.153 0.847 47 H 0.090 0.910 48 H 0.091 0.909 49 H 0.088 0.912 50 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.504 -2.610 -0.413 3.041 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.309 3.691 5 O -0.392 6.392 6 C -0.106 4.106 7 H 0.136 0.864 8 C -0.146 4.146 9 C -0.208 4.208 10 C 0.122 3.878 11 F -0.170 7.170 12 C -0.817 4.817 13 S 2.685 3.315 14 O -0.929 6.929 15 O -0.907 6.907 16 O -0.617 6.617 17 C 0.053 3.947 18 C -0.142 4.142 19 C 0.114 3.886 20 F -0.098 7.098 21 C -0.155 4.155 22 C -0.071 4.071 23 C -0.187 4.187 24 O -0.331 6.331 25 Si 0.588 3.412 26 C -0.137 4.137 27 C -0.166 4.166 28 C -0.145 4.145 29 H 0.100 0.900 30 H 0.088 0.912 31 H 0.087 0.913 32 H 0.089 0.911 33 H 0.090 0.910 34 H 0.092 0.908 35 H 0.118 0.882 36 H 0.112 0.888 37 H 0.123 0.877 38 H 0.179 0.821 39 H 0.171 0.829 40 H 0.177 0.823 41 H 0.171 0.829 42 H 0.148 0.852 43 H 0.228 0.772 44 H -0.174 1.174 45 H -0.178 1.178 46 H 0.170 0.830 47 H 0.109 0.891 48 H 0.109 0.891 49 H 0.107 0.893 50 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 1.885 -2.885 -0.065 3.447 hybrid contribution -0.221 0.263 -1.237 1.284 sum 1.663 -2.622 -1.301 3.367 Atomic orbital electron populations 1.21827 0.92245 1.03302 1.03753 1.23105 0.95691 0.79716 1.02765 1.86510 1.24179 1.32859 1.83623 1.23587 0.80856 0.92349 0.72313 1.90692 1.60472 1.43042 1.45024 1.21245 0.96569 0.90363 1.02449 0.86359 1.21527 1.03234 0.93731 0.96104 1.22630 0.91919 0.99479 1.06775 1.20418 0.94056 0.78835 0.94474 1.92999 1.87737 1.38859 1.97418 1.31678 1.15770 1.15727 1.18558 1.05774 0.75642 0.74716 0.75406 1.93704 1.78187 1.38758 1.82237 1.93682 1.27177 1.85352 1.84508 1.85764 1.31208 1.78483 1.66217 1.17633 0.77637 0.98458 1.00945 1.21315 0.96520 0.98000 0.98406 1.17105 0.91705 0.88767 0.90983 1.91607 1.92184 1.60401 1.65560 1.21343 1.00467 0.96107 0.97554 1.19979 0.94374 0.96218 0.96573 1.25125 1.05858 1.03162 0.84519 1.86637 1.93177 1.33084 1.20205 0.94821 0.74840 0.81042 0.90473 1.21268 0.91569 0.99837 1.01076 1.22065 1.02663 0.95659 0.96201 1.21532 0.91747 0.96243 1.04971 0.89988 0.91249 0.91337 0.91076 0.91040 0.90774 0.88212 0.88800 0.87731 0.82116 0.82886 0.82339 0.82876 0.85204 0.77198 1.17376 1.17850 0.82977 0.89109 0.89082 0.89312 0.90212 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.65 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.35 -0.41 10.12 -39.26 -0.40 -0.80 16 4 C 0.47 0.59 7.26 36.00 0.26 0.85 16 5 O -0.50 -1.95 15.73 -18.75 -0.29 -2.25 16 6 C -0.09 0.13 2.63 -91.77 -0.24 -0.11 16 7 H 0.12 -0.40 8.14 -51.93 -0.42 -0.82 16 8 C -0.11 0.13 4.56 -26.73 -0.12 0.01 16 9 C -0.17 0.16 4.62 -26.73 -0.12 0.03 16 10 C 0.14 -0.11 1.11 -90.62 -0.10 -0.22 16 11 F -0.19 -0.31 16.37 2.25 0.04 -0.27 16 12 C -0.69 1.07 4.08 37.15 0.15 1.23 16 13 S 2.59 4.43 4.41 -107.50 -0.47 3.95 16 14 O -0.93 -3.85 15.97 -67.03 -1.07 -4.92 16 15 O -0.91 -3.32 14.90 -67.04 -1.00 -4.32 16 16 O -0.66 -0.79 10.05 -51.73 -0.52 -1.31 16 17 C 0.09 0.05 4.79 -39.23 -0.19 -0.14 16 18 C -0.12 -0.10 9.03 -39.37 -0.36 -0.46 16 19 C 0.13 0.00 7.30 -39.44 -0.29 -0.29 16 20 F -0.12 -0.10 17.27 2.25 0.04 -0.06 16 21 C -0.14 0.26 8.64 -39.49 -0.34 -0.08 16 22 C -0.07 0.16 5.35 -104.65 -0.56 -0.39 16 23 C -0.08 0.25 2.80 36.01 0.10 0.35 16 24 O -0.52 1.06 12.84 -35.23 -0.45 0.61 16 25 Si 0.69 -2.25 29.88 -169.99 -5.08 -7.33 16 26 C -0.12 0.19 8.10 -39.42 -0.32 -0.13 16 27 C -0.13 0.32 5.19 -26.71 -0.14 0.18 16 28 C -0.11 0.22 4.22 -26.71 -0.11 0.10 16 29 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 30 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 32 H 0.07 0.00 8.13 -51.93 -0.42 -0.43 16 33 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 34 H 0.07 -0.08 6.06 -51.93 -0.31 -0.39 16 35 H 0.10 -0.15 8.11 -51.93 -0.42 -0.57 16 36 H 0.09 0.03 5.40 -51.93 -0.28 -0.25 16 37 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 38 H 0.16 -0.58 4.82 -51.92 -0.25 -0.83 16 39 H 0.15 -0.53 6.63 -51.92 -0.34 -0.88 16 40 H 0.16 0.03 8.06 -52.49 -0.42 -0.40 16 41 H 0.15 -0.58 4.84 -52.48 -0.25 -0.84 16 42 H 0.13 -0.57 7.96 -51.93 -0.41 -0.98 16 43 H 0.38 -1.76 8.70 45.56 0.40 -1.36 16 44 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 45 H -0.25 0.35 7.01 56.52 0.40 0.75 16 46 H 0.15 -0.58 7.53 -52.49 -0.39 -0.97 16 47 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 48 H 0.09 -0.30 8.14 -51.93 -0.42 -0.73 16 49 H 0.09 -0.16 8.10 -51.93 -0.42 -0.58 16 50 H 0.08 -0.16 6.28 -51.93 -0.33 -0.48 16 LS Contribution 413.53 15.07 6.23 6.23 Total: 0.00 -10.41 413.53 -11.20 -21.60 By element: Atomic # 1 Polarization: -6.50 SS G_CDS: -6.45 Total: -12.95 kcal Atomic # 6 Polarization: 3.58 SS G_CDS: -1.76 Total: 1.82 kcal Atomic # 8 Polarization: -9.26 SS G_CDS: -3.73 Total: -12.99 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.08 Total: -0.33 kcal Atomic # 14 Polarization: -2.25 SS G_CDS: -5.08 Total: -7.33 kcal Atomic # 16 Polarization: 4.43 SS G_CDS: -0.47 Total: 3.95 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -10.41 -11.20 -21.60 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_8925532_16464696.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -257.346 kcal (2) G-P(sol) polarization free energy of solvation -10.408 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -267.754 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.196 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.604 kcal (6) G-S(sol) free energy of system = (1) + (5) -278.950 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds