Wall clock time and date at job start Mon Mar 8 2021 12:31:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.45208 * 109.46666 * 2 1 4 4 C 1.34232 * 116.99618 * 180.02562 * 3 2 1 5 5 O 1.20826 * 120.00236 * 359.97438 * 4 3 2 6 6 C 1.50697 * 120.00079 * 180.02562 * 4 3 2 7 7 H 1.09002 * 109.47120 * 59.99588 * 6 4 3 8 8 C 1.52997 * 109.47466 * 179.97438 * 6 4 3 9 9 C 1.53000 * 109.47060 * 180.02562 * 8 6 4 10 10 C 1.53002 * 109.47233 * 299.99657 * 9 8 6 11 11 F 1.39905 * 109.47058 * 300.00814 * 10 9 8 12 12 C 1.52997 * 109.47415 * 180.02562 * 10 9 8 13 13 S 1.81398 * 109.47164 * 185.00277 * 12 10 9 14 14 O 1.42099 * 110.54215 * 291.62193 * 13 12 10 15 15 O 1.42097 * 110.54444 * 68.37666 * 13 12 10 16 16 O 1.52198 * 104.44906 * 179.97438 * 13 12 10 17 17 C 1.35902 * 113.99922 * 74.99767 * 16 13 12 18 18 C 1.38671 * 120.04173 * 90.00375 * 17 16 13 19 19 C 1.38386 * 119.91987 * 179.97438 * 18 17 16 20 20 F 1.35099 * 119.99333 * 179.97438 * 19 18 17 21 21 C 1.38468 * 120.00588 * 0.02562 * 19 18 17 22 22 C 1.38256 * 120.08698 * 359.97438 * 21 19 18 23 23 C 1.50703 * 119.96190 * 180.02562 * 22 21 19 24 24 O 1.42900 * 109.46646 * 244.99687 * 23 22 21 25 25 Si 1.86299 * 109.46976 * 5.00022 * 23 22 21 26 26 C 1.38138 * 120.07526 * 359.74390 * 22 21 19 27 27 C 1.52997 * 109.46817 * 60.00194 * 10 9 8 28 28 C 1.52999 * 109.46961 * 300.00186 * 6 4 3 29 29 H 1.08998 * 109.46939 * 299.99720 * 1 2 3 30 30 H 1.08992 * 109.47077 * 59.99823 * 1 2 3 31 31 H 1.09003 * 109.46618 * 180.02562 * 1 2 3 32 32 H 1.08998 * 109.47407 * 240.00533 * 2 1 3 33 33 H 1.08996 * 109.47314 * 119.99461 * 2 1 3 34 34 H 1.09002 * 109.47153 * 59.99773 * 8 6 4 35 35 H 1.09001 * 109.46832 * 299.99964 * 8 6 4 36 36 H 1.08992 * 109.47399 * 59.99823 * 9 8 6 37 37 H 1.09004 * 109.46724 * 180.02562 * 9 8 6 38 38 H 1.09001 * 109.46547 * 305.00282 * 12 10 9 39 39 H 1.08998 * 109.47097 * 64.99767 * 12 10 9 40 40 H 1.08003 * 120.03655 * 359.97438 * 18 17 16 41 41 H 1.07997 * 119.96146 * 179.97438 * 21 19 18 42 42 H 1.09000 * 109.46897 * 125.00364 * 23 22 21 43 43 H 0.96699 * 113.99790 * 60.00455 * 24 23 22 44 44 H 1.48497 * 110.00247 * 58.68259 * 25 23 22 45 45 H 1.48503 * 109.99544 * 180.02562 * 25 23 22 46 46 H 1.08004 * 119.99919 * 180.27739 * 26 22 21 47 47 H 1.09002 * 109.47153 * 60.00231 * 27 10 9 48 48 H 1.09001 * 109.47289 * 180.02562 * 27 10 9 49 49 H 1.09000 * 109.47486 * 59.99568 * 28 6 4 50 50 H 1.09002 * 109.46716 * 299.99650 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3691 0.0000 4 6 3.3447 1.5450 -0.0005 5 8 4.0808 0.5868 -0.0005 6 6 3.9207 2.9375 0.0000 7 1 3.5851 3.4692 0.8904 8 6 5.4486 2.8575 -0.0001 9 6 6.0333 4.2714 0.0011 10 6 5.5617 5.0194 -1.2475 11 9 5.9928 4.3373 -2.3904 12 6 6.1469 6.4330 -1.2467 13 16 5.4714 7.3679 -2.6468 14 8 5.9584 6.8466 -3.8758 15 8 4.0862 7.6208 -2.4558 16 8 6.1215 8.7397 -2.5365 17 6 7.4242 8.7666 -2.9225 18 6 7.7515 9.0312 -4.2438 19 6 9.0789 9.0586 -4.6339 20 9 9.3994 9.3156 -5.9209 21 6 10.0786 8.8214 -3.7056 22 6 9.7526 8.5577 -2.3882 23 6 10.8429 8.3006 -1.3800 24 8 10.7457 6.9560 -0.9059 25 14 12.5042 8.5576 -2.1829 26 6 8.4289 8.5352 -1.9937 27 6 4.0338 5.0994 -1.2474 28 6 3.4485 3.6852 -1.2485 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8899 31 1 -0.3633 -1.0277 0.0005 32 1 1.8934 -0.5137 -0.8900 33 1 1.8934 -0.5137 0.8900 34 1 5.7845 2.3257 -0.8903 35 1 5.7846 2.3250 0.8896 36 1 5.6974 4.8028 0.8914 37 1 7.1218 4.2144 0.0005 38 1 5.8847 6.9341 -0.3149 39 1 7.2317 6.3772 -1.3365 40 1 6.9713 9.2156 -4.9675 41 1 11.1143 8.8426 -4.0109 42 1 10.7333 8.9898 -0.5427 43 1 10.8343 6.2873 -1.5988 44 1 12.6055 9.9428 -2.7084 45 1 13.5879 8.3065 -1.1991 46 1 8.1759 8.3335 -0.9633 47 1 3.6979 5.6308 -0.3570 48 1 3.6977 5.6319 -2.1372 49 1 2.3600 3.7422 -1.2480 50 1 3.7841 3.1535 -2.1390 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_8925532_16464698.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:31:00 Heat of formation + Delta-G solvation = -283.124921 kcal Electronic energy + Delta-G solvation = -40656.169750 eV Core-core repulsion = 34993.340161 eV Total energy + Delta-G solvation = -5662.829589 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.123 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -50.18991 -49.06920 -42.51697 -41.66257 -40.01494 -39.16176 -38.44187 -37.65111 -37.52867 -37.33098 -34.31358 -32.93808 -32.67503 -32.19830 -31.74988 -29.20831 -27.45336 -25.34179 -24.98121 -24.27202 -23.61863 -23.47850 -21.99143 -21.61833 -20.93337 -19.78769 -19.20430 -19.09218 -18.69493 -18.36930 -17.92260 -17.87122 -17.62354 -17.60889 -17.29708 -17.11235 -16.92125 -16.77078 -16.34123 -16.32158 -16.15596 -15.72092 -15.38807 -15.27450 -15.01768 -14.92893 -14.58787 -14.43660 -14.28769 -14.22226 -14.12137 -13.83139 -13.77573 -13.57850 -13.44179 -13.41147 -13.30665 -13.28827 -13.25873 -13.21866 -13.06333 -12.87443 -12.66735 -12.50842 -12.39708 -12.31516 -12.16810 -12.00473 -11.80971 -11.49593 -11.30989 -11.19214 -10.84567 -10.46842 -10.22751 -5.24893 -1.38356 -0.45560 -0.44282 0.70388 1.00179 1.20575 1.42234 1.62668 1.76964 1.82385 2.22389 2.54376 2.70844 2.72124 2.96150 2.99740 3.10043 3.21566 3.23163 3.35068 3.39372 3.46721 3.50004 3.61560 3.68283 3.70766 3.87576 3.91279 3.96422 3.98891 4.02169 4.08506 4.10994 4.15004 4.25381 4.29881 4.41738 4.44215 4.48423 4.53252 4.59796 4.63470 4.69172 4.70709 4.71059 4.81037 4.83167 4.88191 4.99532 5.02987 5.14482 5.27922 5.48824 6.24160 6.76348 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.467 3.533 5 O -0.503 6.503 6 C -0.083 4.083 7 H 0.115 0.885 8 C -0.109 4.109 9 C -0.128 4.128 10 C 0.139 3.861 11 F -0.188 7.188 12 C -0.685 4.685 13 S 2.591 3.409 14 O -0.929 6.929 15 O -0.912 6.912 16 O -0.659 6.659 17 C 0.096 3.904 18 C -0.122 4.122 19 C 0.134 3.866 20 F -0.119 7.119 21 C -0.133 4.133 22 C -0.073 4.073 23 C -0.070 4.070 24 O -0.535 6.535 25 Si 0.687 3.313 26 C -0.118 4.118 27 C -0.172 4.172 28 C -0.111 4.111 29 H 0.067 0.933 30 H 0.068 0.932 31 H 0.081 0.919 32 H 0.071 0.929 33 H 0.070 0.930 34 H 0.084 0.916 35 H 0.085 0.915 36 H 0.090 0.910 37 H 0.091 0.909 38 H 0.160 0.840 39 H 0.153 0.847 40 H 0.159 0.841 41 H 0.153 0.847 42 H 0.125 0.875 43 H 0.384 0.616 44 H -0.252 1.252 45 H -0.247 1.247 46 H 0.152 0.848 47 H 0.104 0.896 48 H 0.093 0.907 49 H 0.093 0.907 50 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.050 0.389 2.792 3.485 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.309 3.691 5 O -0.391 6.391 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.147 4.147 9 C -0.166 4.166 10 C 0.120 3.880 11 F -0.168 7.168 12 C -0.811 4.811 13 S 2.686 3.314 14 O -0.927 6.927 15 O -0.910 6.910 16 O -0.617 6.617 17 C 0.054 3.946 18 C -0.143 4.143 19 C 0.115 3.885 20 F -0.097 7.097 21 C -0.152 4.152 22 C -0.074 4.074 23 C -0.180 4.180 24 O -0.340 6.340 25 Si 0.588 3.412 26 C -0.138 4.138 27 C -0.209 4.209 28 C -0.148 4.148 29 H 0.086 0.914 30 H 0.087 0.913 31 H 0.100 0.900 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.103 0.897 35 H 0.104 0.896 36 H 0.109 0.891 37 H 0.109 0.891 38 H 0.178 0.822 39 H 0.171 0.829 40 H 0.177 0.823 41 H 0.171 0.829 42 H 0.142 0.858 43 H 0.231 0.769 44 H -0.176 1.176 45 H -0.171 1.171 46 H 0.170 0.830 47 H 0.123 0.877 48 H 0.111 0.889 49 H 0.112 0.888 50 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 2.430 1.153 2.794 3.879 hybrid contribution -0.359 -0.054 0.629 0.726 sum 2.072 1.099 3.423 4.150 Atomic orbital electron populations 1.21823 0.92301 1.03270 1.03683 1.23090 0.95616 0.79804 1.02762 1.86504 1.24304 1.32792 1.83764 1.23597 0.80754 0.92418 0.72319 1.90693 1.60452 1.43053 1.44857 1.21175 0.96708 0.90224 1.02075 0.86753 1.21484 0.91620 0.96402 1.05177 1.22096 1.02683 0.95836 0.95986 1.20452 0.94695 0.87418 0.85476 1.92982 1.91118 1.81094 1.51630 1.31572 1.15262 1.10096 1.24157 1.05751 0.75452 0.73680 0.76567 1.93707 1.80456 1.78760 1.39802 1.93683 1.28690 1.81896 1.86707 1.85767 1.31074 1.58195 1.86696 1.17627 0.78146 1.05921 0.92900 1.21318 0.96865 1.00273 0.95820 1.17112 0.91949 0.99912 0.79552 1.91610 1.93165 1.91021 1.33931 1.21270 0.99911 1.01504 0.92538 1.20049 0.94673 0.98582 0.94084 1.25143 1.05018 0.87734 1.00120 1.86536 1.95930 1.13690 1.37891 0.94654 0.75461 0.85797 0.85307 1.21252 0.91381 1.00988 1.00197 1.22710 0.92045 0.99615 1.06549 1.21503 1.02438 0.93916 0.96971 0.91376 0.91310 0.90012 0.91060 0.91113 0.89726 0.89637 0.89099 0.89074 0.82177 0.82888 0.82314 0.82941 0.85770 0.76850 1.17618 1.17125 0.82989 0.87722 0.88866 0.88800 0.90046 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.24 10.29 37.16 0.38 0.62 16 2 C 0.06 0.02 6.19 37.16 0.23 0.25 16 3 O -0.36 -0.55 10.12 -39.26 -0.40 -0.95 16 4 C 0.47 0.91 7.26 36.00 0.26 1.17 16 5 O -0.50 -2.43 15.73 -18.75 -0.29 -2.73 16 6 C -0.08 0.08 2.63 -91.78 -0.24 -0.17 16 7 H 0.11 -0.35 8.14 -51.93 -0.42 -0.78 16 8 C -0.11 0.11 4.37 -26.73 -0.12 -0.01 16 9 C -0.13 0.36 5.00 -26.73 -0.13 0.22 16 10 C 0.14 -0.16 0.89 -90.62 -0.08 -0.24 16 11 F -0.19 -0.29 15.33 2.25 0.03 -0.25 16 12 C -0.69 1.91 4.79 37.16 0.18 2.09 16 13 S 2.59 2.65 4.41 -107.50 -0.47 2.17 16 14 O -0.93 -3.26 15.96 -67.03 -1.07 -4.33 16 15 O -0.91 -3.08 15.64 -67.04 -1.05 -4.13 16 16 O -0.66 -0.42 10.05 -51.76 -0.52 -0.94 16 17 C 0.10 0.01 4.79 -39.23 -0.19 -0.18 16 18 C -0.12 -0.06 9.03 -39.37 -0.36 -0.41 16 19 C 0.13 -0.05 7.30 -39.44 -0.29 -0.34 16 20 F -0.12 -0.07 17.27 2.25 0.04 -0.03 16 21 C -0.13 0.31 8.64 -39.49 -0.34 -0.03 16 22 C -0.07 0.20 5.35 -104.65 -0.56 -0.36 16 23 C -0.07 0.24 2.80 36.01 0.10 0.34 16 24 O -0.53 1.79 12.84 -35.23 -0.45 1.33 16 25 Si 0.69 -2.40 29.80 -169.99 -5.07 -7.46 16 26 C -0.12 0.25 8.10 -39.42 -0.32 -0.07 16 27 C -0.17 0.18 4.32 -26.70 -0.12 0.06 16 28 C -0.11 0.09 5.02 -26.70 -0.13 -0.04 16 29 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 31 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 32 H 0.07 0.04 8.13 -51.93 -0.42 -0.39 16 33 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 34 H 0.08 0.06 7.76 -51.93 -0.40 -0.34 16 35 H 0.09 -0.09 8.10 -51.93 -0.42 -0.51 16 36 H 0.09 -0.44 8.14 -51.93 -0.42 -0.86 16 37 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 38 H 0.16 -0.97 8.14 -51.92 -0.42 -1.39 16 39 H 0.15 -0.69 6.63 -51.92 -0.34 -1.04 16 40 H 0.16 -0.02 8.06 -52.48 -0.42 -0.44 16 41 H 0.15 -0.69 4.90 -52.49 -0.26 -0.95 16 42 H 0.12 -0.46 7.96 -51.93 -0.41 -0.87 16 43 H 0.38 -2.63 8.70 45.56 0.40 -2.24 16 44 H -0.25 0.28 7.11 56.52 0.40 0.68 16 45 H -0.25 0.03 7.11 56.52 0.40 0.43 16 46 H 0.15 -0.68 7.52 -52.48 -0.39 -1.08 16 47 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 48 H 0.09 0.02 5.40 -51.93 -0.28 -0.26 16 49 H 0.09 -0.14 8.11 -51.93 -0.42 -0.56 16 50 H 0.08 0.01 7.80 -51.93 -0.41 -0.39 16 LS Contribution 420.47 15.07 6.34 6.34 Total: 0.00 -11.24 420.47 -11.42 -22.66 By element: Atomic # 1 Polarization: -7.79 SS G_CDS: -6.79 Total: -14.58 kcal Atomic # 6 Polarization: 4.62 SS G_CDS: -1.72 Total: 2.90 kcal Atomic # 8 Polarization: -7.96 SS G_CDS: -3.78 Total: -11.74 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.07 Total: -0.28 kcal Atomic # 14 Polarization: -2.40 SS G_CDS: -5.07 Total: -7.46 kcal Atomic # 16 Polarization: 2.65 SS G_CDS: -0.47 Total: 2.17 kcal Total LS contribution 6.34 Total: 6.34 kcal Total: -11.24 -11.42 -22.66 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_8925532_16464698.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -260.464 kcal (2) G-P(sol) polarization free energy of solvation -11.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -271.700 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.424 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.661 kcal (6) G-S(sol) free energy of system = (1) + (5) -283.125 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds