Wall clock time and date at job start Mon Mar 8 2021 11:58:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34230 * 116.99837 * 2 1 4 4 O 1.20831 * 119.99897 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00224 * 180.02562 * 3 2 1 6 6 H 1.08999 * 112.90335 * 311.24855 * 5 3 2 7 7 C 1.53954 * 113.66585 * 82.43477 * 5 3 2 8 8 C 1.53788 * 87.01565 * 139.93391 * 7 5 3 9 9 H 1.09007 * 113.61188 * 89.22959 * 8 7 5 10 10 S 1.81398 * 113.61293 * 220.04597 * 8 7 5 11 11 O 1.42105 * 110.53865 * 169.65012 * 10 8 7 12 12 O 1.42090 * 110.54331 * 32.90088 * 10 8 7 13 13 O 1.52201 * 104.45207 * 281.27150 * 10 8 7 14 14 C 1.35997 * 114.00115 * 285.30713 * 13 10 8 15 15 C 1.38892 * 120.03774 * 269.79693 * 14 13 10 16 16 F 1.35096 * 120.03298 * 359.97101 * 15 14 13 17 17 C 1.38337 * 119.92890 * 179.72524 * 15 14 13 18 18 C 1.50702 * 119.99572 * 180.27532 * 17 15 14 19 19 O 1.42895 * 109.47074 * 30.26800 * 18 17 15 20 20 Si 1.86296 * 109.47466 * 150.27195 * 18 17 15 21 21 C 1.38436 * 120.00621 * 0.54229 * 17 15 14 22 22 F 1.35106 * 119.96239 * 179.70216 * 21 17 15 23 23 C 1.38455 * 120.07625 * 359.73140 * 21 17 15 24 24 C 1.38188 * 120.07039 * 359.97438 * 23 21 17 25 25 C 1.53779 * 113.61306 * 180.02562 * 5 3 2 26 26 H 1.08996 * 109.47338 * 60.00107 * 1 2 3 27 27 H 1.09003 * 109.46946 * 180.02562 * 1 2 3 28 28 H 1.08999 * 109.46872 * 299.99913 * 1 2 3 29 29 H 1.08998 * 113.61142 * 25.41918 * 7 5 3 30 30 H 1.08999 * 113.66576 * 254.45650 * 7 5 3 31 31 H 1.09002 * 109.46854 * 270.27455 * 18 17 15 32 32 H 0.96696 * 114.00046 * 60.00664 * 19 18 17 33 33 H 1.48490 * 110.00154 * 179.97438 * 20 18 17 34 34 H 1.48501 * 109.99899 * 301.31955 * 20 18 17 35 35 H 1.08001 * 119.96475 * 179.97438 * 23 21 17 36 36 H 1.07997 * 120.00451 * 180.02562 * 24 23 21 37 37 H 1.08995 * 113.61737 * 105.47018 * 25 5 3 38 38 H 1.08999 * 113.69436 * 334.56993 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0006 6 1 4.0250 0.6360 0.7540 7 6 4.1926 1.1223 -1.3987 8 6 5.1806 2.2272 -0.9886 9 1 6.0812 1.8498 -0.5041 10 16 5.5380 3.4114 -2.3154 11 8 6.2588 4.5260 -1.8081 12 8 4.3974 3.5918 -3.1433 13 8 6.5393 2.6915 -3.2075 14 6 7.7936 2.6214 -2.6868 15 6 8.7144 3.6265 -2.9536 16 9 8.3650 4.6745 -3.7311 17 6 9.9879 3.5557 -2.4181 18 6 10.9862 4.6485 -2.7014 19 8 10.2972 5.8865 -2.8874 20 14 12.1631 4.8023 -1.2655 21 6 10.3472 2.4783 -1.6264 22 9 11.5932 2.4071 -1.1089 23 6 9.4314 1.4734 -1.3650 24 6 8.1564 1.5439 -1.8933 25 6 4.1076 2.7144 0.0001 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 3.5253 1.4125 -2.2101 30 1 4.6646 0.1536 -1.5632 31 1 11.5451 4.4046 -3.6049 32 1 9.7776 6.1664 -2.1213 33 1 13.1530 5.8764 -1.5329 34 1 11.4099 5.1033 -0.0216 35 1 9.7137 0.6335 -0.7475 36 1 7.4428 0.7597 -1.6884 37 1 4.5111 3.0287 0.9626 38 1 3.4179 3.4419 -0.4277 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_9576490_13206342.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:58:09 Heat of formation + Delta-G solvation = -232.343737 kcal Electronic energy + Delta-G solvation = -32042.953291 eV Core-core repulsion = 27004.476215 eV Total energy + Delta-G solvation = -5038.477076 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.060 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -51.04656 -50.26579 -42.33416 -41.98218 -39.86576 -39.71161 -38.44004 -37.81967 -37.41184 -37.33011 -33.11923 -31.39345 -30.03452 -28.01688 -27.44051 -27.39477 -25.07871 -24.06516 -23.34439 -21.96603 -21.02369 -20.03152 -19.76776 -19.68580 -19.12123 -18.95248 -18.28712 -18.00250 -17.69154 -17.61644 -17.42334 -17.08280 -16.86757 -16.64005 -16.38013 -16.05831 -15.99525 -15.81936 -15.47685 -14.94268 -14.60708 -14.55057 -14.26949 -14.16108 -14.11439 -13.96166 -13.85986 -13.61478 -13.40220 -13.35358 -13.33939 -13.23299 -13.12581 -12.86434 -12.58912 -12.18707 -11.95439 -11.87984 -11.79159 -11.39596 -11.11379 -10.28709 -10.23749 -4.69454 -1.43418 -0.73843 -0.62205 0.64684 1.00825 1.08252 1.53225 1.55199 1.59503 1.92079 2.20667 2.25886 2.38982 2.54382 2.66792 2.81447 2.84964 2.95219 2.99312 3.20995 3.29772 3.33827 3.57018 3.71697 3.87174 4.03242 4.09712 4.11655 4.12416 4.14316 4.18696 4.19896 4.26068 4.28355 4.31585 4.37929 4.47420 4.54041 4.66876 5.08029 5.26371 6.27049 6.59074 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.356 6.356 3 C 0.466 3.534 4 O -0.497 6.497 5 C -0.095 4.095 6 H 0.139 0.861 7 C -0.092 4.092 8 C -0.654 4.654 9 H 0.163 0.837 10 S 2.591 3.409 11 O -0.940 6.940 12 O -0.908 6.908 13 O -0.649 6.649 14 C 0.023 3.977 15 C 0.180 3.820 16 F -0.091 7.091 17 C -0.175 4.175 18 C -0.081 4.081 19 O -0.521 6.521 20 Si 0.676 3.324 21 C 0.143 3.857 22 F -0.076 7.076 23 C -0.133 4.133 24 C -0.075 4.075 25 C -0.087 4.087 26 H 0.066 0.934 27 H 0.105 0.895 28 H 0.065 0.935 29 H 0.111 0.889 30 H 0.108 0.892 31 H 0.134 0.866 32 H 0.381 0.619 33 H -0.248 1.248 34 H -0.258 1.258 35 H 0.169 0.831 36 H 0.167 0.833 37 H 0.107 0.893 38 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.889 -9.278 4.690 10.790 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.272 6.272 3 C 0.308 3.692 4 O -0.384 6.384 5 C -0.115 4.115 6 H 0.157 0.843 7 C -0.131 4.131 8 C -0.760 4.760 9 H 0.181 0.819 10 S 2.686 3.314 11 O -0.938 6.938 12 O -0.906 6.906 13 O -0.607 6.607 14 C -0.020 4.020 15 C 0.158 3.842 16 F -0.069 7.069 17 C -0.177 4.177 18 C -0.189 4.189 19 O -0.327 6.327 20 Si 0.575 3.425 21 C 0.123 3.877 22 F -0.054 7.054 23 C -0.152 4.152 24 C -0.095 4.095 25 C -0.125 4.125 26 H 0.085 0.915 27 H 0.123 0.877 28 H 0.084 0.916 29 H 0.129 0.871 30 H 0.126 0.874 31 H 0.151 0.849 32 H 0.229 0.771 33 H -0.174 1.174 34 H -0.182 1.182 35 H 0.187 0.813 36 H 0.184 0.816 37 H 0.125 0.875 38 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges 3.166 -7.930 4.113 9.478 hybrid contribution -1.420 0.381 0.293 1.499 sum 1.746 -7.550 4.407 8.914 Atomic orbital electron populations 1.23369 0.75584 1.04177 1.02939 1.86498 1.24000 1.32948 1.83742 1.23428 0.91476 0.81710 0.72564 1.90722 1.66815 1.36393 1.44488 1.22444 0.88046 1.00011 1.00977 0.84315 1.22711 0.95500 0.98319 0.96521 1.32298 1.08278 1.16548 1.18904 0.81931 1.05778 0.74742 0.75342 0.75530 1.93669 1.69698 1.49152 1.81321 1.93689 1.49563 1.83845 1.63471 1.85809 1.27238 1.84743 1.62924 1.18050 0.82193 0.98343 1.03443 1.17075 0.91463 0.84566 0.91124 1.91671 1.91639 1.53377 1.70201 1.20530 0.95911 0.99686 1.01622 1.25111 0.97978 0.82209 1.13634 1.86646 1.66490 1.36336 1.43239 0.94666 0.84078 0.88938 0.74823 1.17226 0.80546 0.95112 0.94823 1.90796 1.37797 1.92300 1.84550 1.21094 0.91773 0.99732 1.02614 1.21176 0.97729 0.95971 0.94632 1.22639 0.93908 0.96094 0.99859 0.91524 0.87680 0.91610 0.87056 0.87387 0.84896 0.77116 1.17408 1.18169 0.81329 0.81599 0.87490 0.87151 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.02 16 2 O -0.36 -0.08 10.57 -39.26 -0.41 -0.50 16 3 C 0.47 0.38 7.49 36.01 0.27 0.65 16 4 O -0.50 -2.06 15.65 -18.75 -0.29 -2.35 16 5 C -0.09 0.26 4.26 -90.87 -0.39 -0.12 16 6 H 0.14 -0.79 8.14 -51.93 -0.42 -1.21 16 7 C -0.09 0.32 7.21 -25.82 -0.19 0.14 16 8 C -0.65 2.16 3.91 -25.89 -0.10 2.05 16 9 H 0.16 -1.15 6.31 -51.92 -0.33 -1.48 16 10 S 2.59 3.97 5.10 -107.50 -0.55 3.42 16 11 O -0.94 -3.56 15.97 -67.04 -1.07 -4.63 16 12 O -0.91 -4.67 17.37 -67.04 -1.16 -5.83 16 13 O -0.65 -0.68 9.92 -52.05 -0.52 -1.20 16 14 C 0.02 0.00 4.80 -39.19 -0.19 -0.19 16 15 C 0.18 0.29 6.30 -39.30 -0.25 0.04 16 16 F -0.09 -0.41 14.71 2.25 0.03 -0.38 16 17 C -0.18 0.08 5.33 -104.51 -0.56 -0.48 16 18 C -0.08 0.00 2.93 36.01 0.11 0.11 16 19 O -0.52 -1.21 10.84 -35.23 -0.38 -1.59 16 20 Si 0.68 -0.42 28.61 -169.99 -4.86 -5.28 16 21 C 0.14 -0.43 6.73 -39.43 -0.27 -0.70 16 22 F -0.08 0.29 12.43 2.25 0.03 0.32 16 23 C -0.13 0.70 10.02 -39.52 -0.40 0.31 16 24 C -0.08 0.34 8.48 -39.45 -0.33 0.00 16 25 C -0.09 0.19 7.00 -25.90 -0.18 0.01 16 26 H 0.07 -0.06 8.13 -51.93 -0.42 -0.49 16 27 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 28 H 0.07 -0.08 8.13 -51.93 -0.42 -0.50 16 29 H 0.11 -0.22 7.46 -51.93 -0.39 -0.61 16 30 H 0.11 -0.71 8.14 -51.93 -0.42 -1.13 16 31 H 0.13 -0.16 7.96 -51.93 -0.41 -0.58 16 32 H 0.38 0.06 8.70 45.56 0.40 0.45 16 33 H -0.25 -0.61 7.11 56.52 0.40 -0.20 16 34 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 35 H 0.17 -1.45 8.06 -52.49 -0.42 -1.87 16 36 H 0.17 -1.40 7.34 -52.49 -0.39 -1.78 16 37 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 38 H 0.11 -0.05 7.40 -51.93 -0.38 -0.43 16 LS Contribution 342.46 15.07 5.16 5.16 Total: 0.00 -12.41 342.46 -9.09 -21.50 By element: Atomic # 1 Polarization: -7.82 SS G_CDS: -3.66 Total: -11.48 kcal Atomic # 6 Polarization: 4.25 SS G_CDS: -1.40 Total: 2.84 kcal Atomic # 8 Polarization: -12.26 SS G_CDS: -3.84 Total: -16.10 kcal Atomic # 9 Polarization: -0.12 SS G_CDS: 0.06 Total: -0.06 kcal Atomic # 14 Polarization: -0.42 SS G_CDS: -4.86 Total: -5.28 kcal Atomic # 16 Polarization: 3.97 SS G_CDS: -0.55 Total: 3.42 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -12.41 -9.09 -21.50 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_9576490_13206342.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -210.844 kcal (2) G-P(sol) polarization free energy of solvation -12.408 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -223.252 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.092 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.500 kcal (6) G-S(sol) free energy of system = (1) + (5) -232.344 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds