Wall clock time and date at job start Mon Mar 8 2021 13:37:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.45201 * 109.47352 * 2 1 4 4 C 1.34231 * 117.00038 * 180.02562 * 3 2 1 5 5 O 1.20821 * 119.99926 * 359.97438 * 4 3 2 6 6 C 1.50701 * 119.99802 * 180.02562 * 4 3 2 7 7 H 1.09000 * 112.84744 * 48.80077 * 6 4 3 8 8 C 1.53782 * 113.60950 * 179.97438 * 6 4 3 9 9 C 1.53775 * 87.08154 * 89.11893 * 8 6 4 10 10 F 1.39904 * 113.60991 * 270.79881 * 9 8 6 11 11 C 1.52994 * 113.61780 * 139.98223 * 9 8 6 12 12 S 1.81403 * 109.47345 * 184.99923 * 11 9 8 13 13 O 1.42093 * 110.54380 * 68.36977 * 12 11 9 14 14 O 1.42099 * 110.53912 * 291.62267 * 12 11 9 15 15 O 1.52204 * 104.44896 * 179.97438 * 12 11 9 16 16 C 1.35994 * 113.99977 * 75.00037 * 15 12 11 17 17 C 1.38888 * 120.04350 * 89.99885 * 16 15 12 18 18 F 1.35101 * 120.02813 * 359.97438 * 17 16 15 19 19 C 1.38325 * 119.93447 * 179.72231 * 17 16 15 20 20 C 1.50700 * 119.99754 * 180.27773 * 19 17 16 21 21 O 1.42894 * 109.47572 * 56.99628 * 20 19 17 22 22 Si 1.86301 * 109.46975 * 296.99420 * 20 19 17 23 23 C 1.38443 * 120.00556 * 0.25231 * 19 17 16 24 24 F 1.35108 * 119.96003 * 180.02562 * 23 19 17 25 25 C 1.38445 * 120.07452 * 0.02562 * 23 19 17 26 26 C 1.38186 * 120.07306 * 359.97438 * 25 23 19 27 27 C 1.53774 * 87.08312 * 25.42941 * 9 8 6 28 28 H 1.09006 * 109.47168 * 299.99979 * 1 2 3 29 29 H 1.09002 * 109.47039 * 59.99352 * 1 2 3 30 30 H 1.09003 * 109.47521 * 179.97438 * 1 2 3 31 31 H 1.09006 * 109.47168 * 240.00021 * 2 1 3 32 32 H 1.08996 * 109.47370 * 120.00355 * 2 1 3 33 33 H 1.09001 * 113.61658 * 334.56439 * 8 6 4 34 34 H 1.09005 * 113.60801 * 203.66787 * 8 6 4 35 35 H 1.08994 * 109.47666 * 64.99326 * 11 9 8 36 36 H 1.09001 * 109.46912 * 304.99783 * 11 9 8 37 37 H 1.09006 * 109.47516 * 176.99592 * 20 19 17 38 38 H 0.96703 * 114.00371 * 180.02562 * 21 20 19 39 39 H 1.48497 * 110.00223 * 305.41683 * 22 20 19 40 40 H 1.48504 * 110.00003 * 66.73308 * 22 20 19 41 41 H 1.08003 * 119.96456 * 180.02562 * 25 23 19 42 42 H 1.08000 * 120.00927 * 180.02562 * 26 25 23 43 43 H 1.08993 * 113.61724 * 89.11977 * 27 9 8 44 44 H 1.09004 * 113.61494 * 220.02401 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.4715 3.5809 0.7564 8 6 5.4583 2.9679 -0.0001 9 6 5.3804 2.9434 -1.5357 10 9 5.3596 1.6527 -2.0751 11 6 6.4034 3.8552 -2.2159 12 16 6.1174 3.8543 -4.0073 13 8 4.8912 4.5021 -4.3169 14 8 6.4363 2.5856 -4.5624 15 8 7.1846 4.7866 -4.5627 16 6 8.4327 4.2470 -4.5861 17 6 8.8664 3.5462 -5.7040 18 9 8.0486 3.3994 -6.7693 19 6 10.1384 3.0032 -5.7277 20 6 10.6128 2.2479 -6.9424 21 8 10.5185 3.0893 -8.0935 22 14 9.5502 0.7375 -7.1885 23 6 10.9760 3.1540 -4.6357 24 9 12.2184 2.6237 -4.6600 25 6 10.5419 3.8476 -3.5189 26 6 9.2718 4.3913 -3.4919 27 6 3.9863 3.5774 -1.3967 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3634 -1.0277 -0.0005 31 1 1.8933 -0.5139 -0.8900 32 1 1.8933 -0.5139 0.8899 33 1 5.9128 2.0747 0.4285 34 1 5.8766 3.8910 0.4012 35 1 7.4095 3.4910 -2.0084 36 1 6.2979 4.8698 -1.8317 37 1 11.6495 1.9432 -6.7990 38 1 10.8077 2.6672 -8.9140 39 1 9.5358 -0.0808 -5.9495 40 1 8.1668 1.1424 -7.5458 41 1 11.1969 3.9645 -2.6682 42 1 8.9344 4.9325 -2.6203 43 1 4.0022 4.6671 -1.3773 44 1 3.2525 3.1762 -2.0957 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_9576490_15494190.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:37:46 Heat of formation + Delta-G solvation = -281.249151 kcal Electronic energy + Delta-G solvation = -39299.735161 eV Core-core repulsion = 33478.608174 eV Total energy + Delta-G solvation = -5821.126987 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.082 amu Computer time = 1.54 seconds Orbital eigenvalues (eV) -50.64724 -50.41373 -49.21782 -42.38771 -41.90263 -39.72302 -39.36293 -38.69997 -37.76995 -37.59617 -37.54455 -33.27546 -32.86625 -32.01897 -31.32714 -27.56276 -27.26561 -26.75049 -25.11757 -24.14019 -23.60431 -22.69822 -21.98544 -20.74365 -20.01761 -19.69162 -19.52973 -19.16341 -18.91488 -18.63246 -18.26542 -17.91288 -17.54276 -17.35371 -17.28192 -17.18123 -16.81846 -16.70178 -16.64166 -16.27769 -16.10387 -15.75311 -15.68546 -15.32814 -15.26266 -14.80924 -14.69696 -14.52942 -14.40045 -14.25250 -14.14524 -13.82002 -13.76018 -13.68477 -13.62506 -13.51025 -13.43892 -13.29759 -13.16433 -13.02755 -12.89055 -12.65606 -12.59843 -12.45848 -12.13506 -11.73474 -11.65351 -11.59280 -11.46481 -11.03212 -10.21951 -10.15349 -5.26946 -1.55151 -0.68696 -0.59465 0.59297 0.96847 1.02734 1.43416 1.50561 1.67494 1.89983 2.15080 2.28328 2.49642 2.65564 2.69715 2.72886 2.79572 2.91126 3.13618 3.18010 3.27160 3.39988 3.42486 3.62047 3.69712 3.83031 3.88182 3.95740 4.02802 4.11634 4.15197 4.22746 4.31259 4.37505 4.39207 4.45778 4.49424 4.52888 4.59069 4.63989 4.73514 4.79666 4.81726 4.99425 5.06299 5.20321 5.35737 6.56459 6.68096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.461 3.539 5 O -0.528 6.528 6 C -0.113 4.113 7 H 0.170 0.830 8 C -0.104 4.104 9 C 0.063 3.937 10 F -0.202 7.202 11 C -0.637 4.637 12 S 2.559 3.441 13 O -0.947 6.947 14 O -0.985 6.985 15 O -0.652 6.652 16 C -0.006 4.006 17 C 0.128 3.872 18 F -0.124 7.124 19 C -0.167 4.167 20 C -0.066 4.066 21 O -0.556 6.556 22 Si 0.760 3.240 23 C 0.161 3.839 24 F -0.109 7.109 25 C -0.121 4.121 26 C -0.055 4.055 27 C -0.153 4.153 28 H 0.074 0.926 29 H 0.066 0.934 30 H 0.096 0.904 31 H 0.058 0.942 32 H 0.072 0.928 33 H 0.088 0.912 34 H 0.178 0.822 35 H 0.185 0.815 36 H 0.226 0.774 37 H 0.120 0.880 38 H 0.410 0.590 39 H -0.287 1.287 40 H -0.300 1.300 41 H 0.216 0.784 42 H 0.225 0.775 43 H 0.172 0.828 44 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.643 4.442 7.867 10.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.305 3.695 5 O -0.416 6.416 6 C -0.131 4.131 7 H 0.188 0.812 8 C -0.142 4.142 9 C 0.044 3.956 10 F -0.182 7.182 11 C -0.768 4.768 12 S 2.660 3.340 13 O -0.945 6.945 14 O -0.983 6.983 15 O -0.610 6.610 16 C -0.049 4.049 17 C 0.106 3.894 18 F -0.102 7.102 19 C -0.169 4.169 20 C -0.176 4.176 21 O -0.367 6.367 22 Si 0.665 3.335 23 C 0.140 3.860 24 F -0.087 7.087 25 C -0.139 4.139 26 C -0.074 4.074 27 C -0.190 4.190 28 H 0.093 0.907 29 H 0.085 0.915 30 H 0.115 0.885 31 H 0.077 0.923 32 H 0.091 0.909 33 H 0.107 0.893 34 H 0.196 0.804 35 H 0.203 0.797 36 H 0.243 0.757 37 H 0.138 0.862 38 H 0.263 0.737 39 H -0.214 1.214 40 H -0.228 1.228 41 H 0.233 0.767 42 H 0.242 0.758 43 H 0.190 0.810 44 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 4.556 4.083 7.716 9.847 hybrid contribution -0.391 -0.570 -0.357 0.778 sum 4.165 3.513 7.359 9.157 Atomic orbital electron populations 1.21828 0.90430 1.04342 1.03854 1.23255 0.97116 0.79338 1.02303 1.86491 1.24170 1.33446 1.83567 1.23887 0.80787 0.93146 0.71675 1.90694 1.61028 1.44187 1.45729 1.22192 0.98709 0.90062 1.02167 0.81223 1.23721 0.92688 1.08279 0.89491 1.22087 0.97022 0.78303 0.98230 1.92990 1.97335 1.40484 1.87396 1.31213 1.11162 1.13287 1.21089 1.06363 0.74442 0.72947 0.80205 1.93619 1.42271 1.74696 1.83958 1.93641 1.82662 1.45398 1.76621 1.85782 1.27365 1.61748 1.86120 1.18491 0.84203 1.04563 0.97651 1.17799 0.88957 0.98255 0.84425 1.91507 1.71491 1.93083 1.54141 1.19653 0.93135 1.04597 0.99546 1.24430 1.08235 1.00038 0.84887 1.86454 1.90053 1.41968 1.18238 0.95303 0.78076 0.75419 0.84678 1.17411 0.79828 0.94865 0.93877 1.91599 1.37224 1.83457 1.96440 1.21723 0.96781 0.96704 0.98690 1.21888 0.91894 0.96509 0.97144 1.24084 0.93904 1.05555 0.95442 0.90678 0.91536 0.88518 0.92304 0.90920 0.89326 0.80417 0.79723 0.75670 0.86238 0.73749 1.21414 1.22818 0.76672 0.75819 0.81001 0.90663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.19 10.29 71.98 0.74 0.93 16 2 C 0.05 0.21 6.19 71.98 0.45 0.66 16 3 O -0.36 -2.09 10.22 -51.43 -0.53 -2.61 16 4 C 0.46 2.78 6.93 71.24 0.49 3.28 16 5 O -0.53 -6.83 14.47 21.98 0.32 -6.52 16 6 C -0.11 0.49 4.46 -11.01 -0.05 0.45 16 7 H 0.17 -2.06 8.14 -2.39 -0.02 -2.08 16 8 C -0.10 0.82 6.93 31.12 0.22 1.04 16 9 C 0.06 -0.07 1.56 -10.27 -0.02 -0.09 16 10 F -0.20 -2.25 14.83 44.97 0.67 -1.58 16 11 C -0.64 4.97 5.11 71.98 0.37 5.34 16 12 S 2.56 19.30 4.92 -56.49 -0.28 19.02 16 13 O -0.95 -12.43 17.96 -118.57 -2.13 -14.56 16 14 O -0.98 -16.87 15.50 -118.57 -1.84 -18.71 16 15 O -0.65 -3.88 9.92 -62.57 -0.62 -4.50 16 16 C -0.01 -0.03 4.81 22.52 0.11 0.08 16 17 C 0.13 1.41 5.79 22.45 0.13 1.54 16 18 F -0.12 -2.28 13.93 44.97 0.63 -1.65 16 19 C -0.17 -1.00 4.51 -19.80 -0.09 -1.09 16 20 C -0.07 -0.19 2.70 71.24 0.19 0.00 16 21 O -0.56 -1.74 12.29 -148.98 -1.83 -3.57 16 22 Si 0.76 4.11 31.40 68.60 2.15 6.26 16 23 C 0.16 -0.15 7.24 22.37 0.16 0.01 16 24 F -0.11 0.19 16.19 44.97 0.73 0.92 16 25 C -0.12 1.07 10.02 22.31 0.22 1.29 16 26 C -0.06 0.45 8.45 22.35 0.19 0.64 16 27 C -0.15 0.55 6.93 31.12 0.22 0.77 16 28 H 0.07 -0.18 8.14 -2.38 -0.02 -0.20 16 29 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 30 H 0.10 -0.41 8.14 -2.39 -0.02 -0.43 16 31 H 0.06 0.36 8.13 -2.38 -0.02 0.34 16 32 H 0.07 0.24 8.13 -2.39 -0.02 0.23 16 33 H 0.09 -0.28 7.43 -2.39 -0.02 -0.30 16 34 H 0.18 -3.43 8.10 -2.38 -0.02 -3.44 16 35 H 0.19 -2.64 6.58 -2.39 -0.02 -2.66 16 36 H 0.23 -4.58 8.05 -2.39 -0.02 -4.60 16 37 H 0.12 -0.40 6.95 -2.38 -0.02 -0.41 16 38 H 0.41 -3.23 8.74 -74.06 -0.65 -3.88 16 39 H -0.29 -3.18 7.11 99.48 0.71 -2.47 16 40 H -0.30 -5.02 6.52 99.48 0.65 -4.37 16 41 H 0.22 -3.94 8.06 -2.91 -0.02 -3.97 16 42 H 0.23 -4.63 7.47 -2.91 -0.02 -4.65 16 43 H 0.17 -2.17 8.03 -2.39 -0.02 -2.18 16 44 H 0.07 0.15 8.09 -2.38 -0.02 0.13 16 Total: 0.00 -48.68 393.51 1.02 -47.66 By element: Atomic # 1 Polarization: -35.43 SS G_CDS: 0.42 Total: -35.01 kcal Atomic # 6 Polarization: 11.52 SS G_CDS: 3.33 Total: 14.84 kcal Atomic # 8 Polarization: -43.83 SS G_CDS: -6.63 Total: -50.46 kcal Atomic # 9 Polarization: -4.34 SS G_CDS: 2.02 Total: -2.32 kcal Atomic # 14 Polarization: 4.11 SS G_CDS: 2.15 Total: 6.26 kcal Atomic # 16 Polarization: 19.30 SS G_CDS: -0.28 Total: 19.02 kcal Total: -48.68 1.02 -47.66 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_9576490_15494190.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -233.589 kcal (2) G-P(sol) polarization free energy of solvation -48.680 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -282.269 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.019 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.660 kcal (6) G-S(sol) free energy of system = (1) + (5) -281.249 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.54 seconds