Wall clock time and date at job start Mon Mar 8 2021 13:55:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45199 * 109.47075 * 2 1 4 4 C 1.34230 * 116.99614 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00179 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99717 * 179.97438 * 4 3 2 7 7 H 1.09003 * 109.46535 * 60.00663 * 6 4 3 8 8 C 1.53003 * 109.47116 * 180.02562 * 6 4 3 9 9 C 1.52994 * 109.47081 * 180.02562 * 8 6 4 10 10 C 1.52997 * 109.47125 * 299.99933 * 9 8 6 11 11 F 1.39906 * 109.47354 * 180.02562 * 10 9 8 12 12 C 1.53000 * 109.47061 * 300.00098 * 10 9 8 13 13 S 1.81404 * 109.47054 * 179.97438 * 12 10 9 14 14 O 1.42095 * 110.54413 * 291.62484 * 13 12 10 15 15 O 1.42098 * 110.54146 * 68.37710 * 13 12 10 16 16 O 1.52200 * 104.45093 * 180.02562 * 13 12 10 17 17 C 1.35996 * 114.00004 * 74.99978 * 16 13 12 18 18 C 1.38892 * 120.03955 * 269.73067 * 17 16 13 19 19 F 1.35103 * 120.03401 * 359.97438 * 18 17 16 20 20 C 1.38334 * 119.92897 * 179.72110 * 18 17 16 21 21 C 1.50702 * 119.99489 * 180.25050 * 20 18 17 22 22 O 1.42893 * 109.47282 * 30.32302 * 21 20 18 23 23 Si 1.86307 * 109.47159 * 150.32004 * 21 20 18 24 24 C 1.38442 * 120.00857 * 0.57487 * 20 18 17 25 25 F 1.35093 * 119.96440 * 179.70430 * 24 20 18 26 26 C 1.38457 * 120.07175 * 359.67402 * 24 20 18 27 27 C 1.38186 * 120.07140 * 0.04980 * 26 24 20 28 28 C 1.53003 * 109.47087 * 60.00071 * 10 9 8 29 29 C 1.52994 * 109.47081 * 299.99956 * 28 10 9 30 30 H 1.08996 * 109.47853 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47153 * 300.00058 * 1 2 3 32 32 H 1.08998 * 109.47533 * 59.99688 * 1 2 3 33 33 H 1.09002 * 109.47153 * 239.99942 * 2 1 3 34 34 H 1.09001 * 109.46832 * 120.00132 * 2 1 3 35 35 H 1.09000 * 109.47151 * 300.00236 * 8 6 4 36 36 H 1.09003 * 109.46860 * 60.00013 * 8 6 4 37 37 H 1.09003 * 109.47577 * 60.00068 * 9 8 6 38 38 H 1.09005 * 109.47167 * 180.02562 * 9 8 6 39 39 H 1.08993 * 109.47435 * 299.99626 * 12 10 9 40 40 H 1.08997 * 109.47153 * 60.00423 * 12 10 9 41 41 H 1.08996 * 109.47594 * 270.31949 * 21 20 18 42 42 H 0.96699 * 114.00569 * 59.99443 * 22 21 20 43 43 H 1.48500 * 110.00275 * 180.02562 * 23 21 20 44 44 H 1.48503 * 109.99656 * 301.32289 * 23 21 20 45 45 H 1.08001 * 119.96263 * 180.02562 * 26 24 20 46 46 H 1.07998 * 120.00506 * 179.97438 * 27 26 24 47 47 H 1.09003 * 109.46860 * 60.00328 * 28 10 9 48 48 H 1.09000 * 109.47151 * 180.02562 * 28 10 9 49 49 H 1.09003 * 109.47577 * 299.99932 * 29 28 10 50 50 H 1.09005 * 109.47167 * 179.97438 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9207 2.9374 0.0000 7 1 3.5844 3.4699 0.8896 8 6 5.4487 2.8573 0.0001 9 6 6.0335 4.2711 0.0002 10 6 5.5620 5.0180 -1.2490 11 9 6.0972 6.3107 -1.2493 12 6 6.0337 4.2711 -2.4982 13 16 5.4741 5.1563 -3.9794 14 8 4.0608 5.0775 -4.1033 15 8 6.1523 6.3988 -4.1037 16 8 5.9990 4.3238 -5.1404 17 6 5.3061 3.1733 -5.3539 18 6 5.6915 2.0010 -4.7166 19 9 6.7557 2.0023 -3.8842 20 6 4.9815 0.8333 -4.9310 21 6 5.3950 -0.4382 -4.2358 22 8 5.9906 -0.1206 -2.9764 23 14 3.8970 -1.5113 -3.9612 24 6 3.8952 0.8311 -5.7892 25 9 3.2061 -0.3111 -6.0025 26 6 3.5139 1.9985 -6.4287 27 6 4.2174 3.1680 -6.2124 28 6 4.0341 5.0981 -1.2492 29 6 3.4493 3.6843 -1.2493 30 1 -0.3635 -1.0276 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3634 0.5139 -0.8899 33 1 1.8933 -0.5138 -0.8900 34 1 1.8933 -0.5139 0.8900 35 1 5.7846 2.3255 0.8903 36 1 5.7846 2.3247 -0.8897 37 1 5.6975 4.8033 0.8902 38 1 7.1220 4.2140 -0.0002 39 1 7.1221 4.2140 -2.4982 40 1 5.6170 3.2639 -2.4983 41 1 6.1161 -0.9725 -4.8543 42 1 5.4045 0.3567 -2.3732 43 1 4.2912 -2.7683 -3.2757 44 1 2.8926 -0.7822 -3.1458 45 1 2.6659 1.9949 -7.0975 46 1 3.9193 4.0779 -6.7121 47 1 3.6981 5.6303 -0.3592 48 1 3.6982 5.6299 -2.1394 49 1 3.7853 3.1521 -2.1392 50 1 2.3608 3.7414 -1.2489 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_9576490_16464696.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:55:52 Heat of formation + Delta-G solvation = -318.155198 kcal Electronic energy + Delta-G solvation = -47325.386933 eV Core-core repulsion = 41191.584342 eV Total energy + Delta-G solvation = -6133.802591 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 439.113 amu Computer time = 3.51 seconds Orbital eigenvalues (eV) -51.08856 -50.61730 -49.08771 -42.39044 -41.94199 -39.92857 -39.77038 -38.48982 -37.89807 -37.70577 -37.39019 -33.70662 -33.13724 -32.66223 -32.30461 -31.46850 -29.44877 -27.57107 -25.55149 -25.14730 -24.40760 -23.97334 -23.78113 -22.28316 -21.88727 -20.65086 -20.03994 -19.75737 -19.61510 -19.31644 -18.85879 -18.35959 -18.15767 -17.90499 -17.78942 -17.72057 -17.44041 -17.32100 -17.00836 -16.80269 -16.45119 -16.28244 -16.15503 -16.08409 -15.87038 -15.59177 -15.47389 -15.09916 -15.07711 -14.69362 -14.62641 -14.29315 -14.20829 -14.17284 -13.97583 -13.93990 -13.91202 -13.75056 -13.47742 -13.41543 -13.32854 -13.26909 -13.15466 -13.02224 -12.96225 -12.87285 -12.68572 -12.63396 -12.48829 -12.10507 -12.03680 -11.79915 -11.60591 -11.46377 -11.31814 -11.18683 -10.38459 -10.32153 -4.75443 -1.48644 -0.75368 -0.72816 0.59472 1.00229 1.01095 1.46047 1.46155 1.53200 1.85766 2.09104 2.19788 2.48109 2.51069 2.69812 2.77494 2.88807 2.90367 2.94719 3.19748 3.21297 3.21773 3.33730 3.43975 3.49111 3.59397 3.76795 3.80511 3.83411 3.87481 3.93600 3.95507 4.01244 4.02990 4.11030 4.16917 4.21572 4.27854 4.32711 4.33696 4.40053 4.45950 4.55251 4.62065 4.64228 4.69584 4.70111 4.75848 4.85699 4.91596 4.96268 5.02185 5.32398 6.11106 6.57679 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.059 3.941 3 O -0.353 6.353 4 C 0.464 3.536 5 O -0.504 6.504 6 C -0.089 4.089 7 H 0.121 0.879 8 C -0.108 4.108 9 C -0.128 4.128 10 C 0.140 3.860 11 F -0.189 7.189 12 C -0.689 4.689 13 S 2.588 3.412 14 O -0.937 6.937 15 O -0.899 6.899 16 O -0.650 6.650 17 C 0.025 3.975 18 C 0.133 3.867 19 F -0.099 7.099 20 C -0.172 4.172 21 C -0.081 4.081 22 O -0.517 6.517 23 Si 0.671 3.329 24 C 0.142 3.858 25 F -0.075 7.075 26 C -0.129 4.129 27 C -0.031 4.031 28 C -0.169 4.169 29 C -0.107 4.107 30 H 0.082 0.918 31 H 0.069 0.931 32 H 0.068 0.932 33 H 0.068 0.932 34 H 0.072 0.928 35 H 0.090 0.910 36 H 0.078 0.922 37 H 0.092 0.908 38 H 0.091 0.909 39 H 0.160 0.840 40 H 0.150 0.850 41 H 0.136 0.864 42 H 0.375 0.625 43 H -0.246 1.246 44 H -0.258 1.258 45 H 0.171 0.829 46 H 0.169 0.831 47 H 0.104 0.896 48 H 0.100 0.900 49 H 0.066 0.934 50 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.537 -2.967 -1.551 6.471 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.014 4.014 3 O -0.270 6.270 4 C 0.307 3.693 5 O -0.392 6.392 6 C -0.108 4.108 7 H 0.138 0.862 8 C -0.146 4.146 9 C -0.166 4.166 10 C 0.121 3.879 11 F -0.169 7.169 12 C -0.814 4.814 13 S 2.681 3.319 14 O -0.935 6.935 15 O -0.897 6.897 16 O -0.608 6.608 17 C -0.018 4.018 18 C 0.111 3.889 19 F -0.077 7.077 20 C -0.175 4.175 21 C -0.189 4.189 22 O -0.323 6.323 23 Si 0.571 3.429 24 C 0.122 3.878 25 F -0.054 7.054 26 C -0.148 4.148 27 C -0.051 4.051 28 C -0.207 4.207 29 C -0.144 4.144 30 H 0.101 0.899 31 H 0.088 0.912 32 H 0.087 0.913 33 H 0.086 0.914 34 H 0.091 0.909 35 H 0.108 0.892 36 H 0.096 0.904 37 H 0.110 0.890 38 H 0.110 0.890 39 H 0.178 0.822 40 H 0.168 0.832 41 H 0.154 0.846 42 H 0.223 0.777 43 H -0.172 1.172 44 H -0.182 1.182 45 H 0.188 0.812 46 H 0.187 0.813 47 H 0.122 0.878 48 H 0.118 0.882 49 H 0.084 0.916 50 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -5.412 -3.419 -1.718 6.628 hybrid contribution 1.052 0.278 1.498 1.851 sum -4.360 -3.140 -0.220 5.378 Atomic orbital electron populations 1.21825 0.92055 1.03393 1.03812 1.23131 0.95878 0.79724 1.02675 1.86511 1.24155 1.32810 1.83540 1.23668 0.80909 0.92433 0.72334 1.90694 1.60436 1.42985 1.45073 1.21279 0.96701 0.90271 1.02524 0.86159 1.21528 0.91522 0.96478 1.05025 1.22056 1.02801 0.95525 0.96210 1.20451 0.94116 0.78865 0.94494 1.93010 1.87728 1.38810 1.97400 1.31726 1.15623 1.15524 1.18549 1.05907 0.74998 0.75494 0.75453 1.93657 1.30349 1.86016 1.83512 1.93711 1.75070 1.37482 1.83451 1.85826 1.68015 1.40300 1.66667 1.18071 0.96387 0.81975 1.05354 1.17149 0.86657 0.92156 0.92894 1.91649 1.51794 1.96734 1.67561 1.20455 0.97329 0.97109 1.02579 1.25094 1.10656 0.96405 0.86795 1.86672 1.42098 1.78854 1.24628 0.94769 0.76190 0.81560 0.90379 1.17259 0.90611 0.82873 0.97048 1.90791 1.77710 1.46334 1.90535 1.21220 1.02350 0.89629 1.01555 1.21202 0.90393 1.00134 0.93378 1.22606 0.91848 0.99138 1.07067 1.21507 1.03119 0.94018 0.95782 0.89924 0.91180 0.91252 0.91401 0.90943 0.89154 0.90352 0.88988 0.89002 0.82208 0.83242 0.84638 0.77737 1.17168 1.18215 0.81157 0.81333 0.87750 0.88209 0.91566 0.88199 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.31 10.29 37.16 0.38 0.69 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.35 -0.24 10.12 -39.26 -0.40 -0.63 16 4 C 0.46 0.30 7.26 36.01 0.26 0.56 16 5 O -0.50 -1.50 15.73 -18.75 -0.29 -1.79 16 6 C -0.09 0.17 2.63 -91.77 -0.24 -0.07 16 7 H 0.12 -0.44 8.14 -51.93 -0.42 -0.86 16 8 C -0.11 0.21 4.22 -26.73 -0.11 0.09 16 9 C -0.13 0.27 5.19 -26.74 -0.14 0.13 16 10 C 0.14 -0.06 1.10 -90.62 -0.10 -0.16 16 11 F -0.19 -0.42 16.08 2.25 0.04 -0.38 16 12 C -0.69 0.34 3.24 37.16 0.12 0.46 16 13 S 2.59 4.98 4.51 -107.50 -0.49 4.50 16 14 O -0.94 -1.55 13.88 -67.04 -0.93 -2.48 16 15 O -0.90 -5.16 17.61 -67.03 -1.18 -6.34 16 16 O -0.65 -0.98 9.92 -52.05 -0.52 -1.50 16 17 C 0.03 0.00 4.80 -39.19 -0.19 -0.19 16 18 C 0.13 -0.01 6.14 -39.30 -0.24 -0.25 16 19 F -0.10 -0.07 12.70 2.25 0.03 -0.04 16 20 C -0.17 0.18 5.33 -104.51 -0.56 -0.37 16 21 C -0.08 0.04 2.93 36.01 0.11 0.14 16 22 O -0.52 -0.75 10.84 -35.23 -0.38 -1.13 16 23 Si 0.67 -0.30 28.61 -169.99 -4.86 -5.17 16 24 C 0.14 -0.38 6.73 -39.43 -0.27 -0.65 16 25 F -0.08 0.26 12.43 2.25 0.03 0.29 16 26 C -0.13 0.50 10.02 -39.52 -0.40 0.10 16 27 C -0.03 0.07 9.04 -39.45 -0.36 -0.29 16 28 C -0.17 0.24 4.71 -26.73 -0.13 0.11 16 29 C -0.11 0.21 4.86 -26.74 -0.13 0.08 16 30 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 31 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 33 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 34 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 35 H 0.09 -0.15 8.10 -51.93 -0.42 -0.57 16 36 H 0.08 -0.13 6.39 -51.93 -0.33 -0.46 16 37 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 38 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 39 H 0.16 -0.31 8.14 -51.93 -0.42 -0.73 16 40 H 0.15 -0.29 2.79 -51.93 -0.14 -0.43 16 41 H 0.14 -0.22 7.96 -51.93 -0.41 -0.64 16 42 H 0.37 0.07 8.70 45.56 0.40 0.47 16 43 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 44 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 45 H 0.17 -1.18 8.06 -52.49 -0.42 -1.60 16 46 H 0.17 -0.68 8.06 -52.49 -0.42 -1.10 16 47 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 48 H 0.10 -0.06 5.46 -51.93 -0.28 -0.34 16 49 H 0.07 -0.14 6.43 -51.93 -0.33 -0.47 16 50 H 0.10 -0.25 8.11 -51.93 -0.42 -0.67 16 LS Contribution 412.77 15.07 6.22 6.22 Total: 0.00 -9.45 412.77 -10.71 -20.17 By element: Atomic # 1 Polarization: -6.12 SS G_CDS: -6.22 Total: -12.34 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -1.75 Total: 0.63 kcal Atomic # 8 Polarization: -10.18 SS G_CDS: -3.70 Total: -13.88 kcal Atomic # 9 Polarization: -0.22 SS G_CDS: 0.09 Total: -0.13 kcal Atomic # 14 Polarization: -0.30 SS G_CDS: -4.86 Total: -5.17 kcal Atomic # 16 Polarization: 4.98 SS G_CDS: -0.49 Total: 4.50 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -9.45 -10.71 -20.17 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_9576490_16464696.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -297.990 kcal (2) G-P(sol) polarization free energy of solvation -9.453 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -307.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.712 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.165 kcal (6) G-S(sol) free energy of system = (1) + (5) -318.155 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.51 seconds