Wall clock time and date at job start Mon Mar 8 2021 13:55:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 O 1.45203 * 109.47132 * 2 1 4 4 C 1.34232 * 117.00214 * 179.97438 * 3 2 1 5 5 O 1.20825 * 119.99576 * 0.02562 * 4 3 2 6 6 C 1.50697 * 120.00081 * 179.97438 * 4 3 2 7 7 H 1.09004 * 109.46749 * 299.99736 * 6 4 3 8 8 C 1.52994 * 109.47452 * 59.99857 * 6 4 3 9 9 C 1.52997 * 109.47534 * 179.97438 * 8 6 4 10 10 C 1.52997 * 109.46960 * 300.00067 * 9 8 6 11 11 F 1.39899 * 109.47406 * 299.99861 * 10 9 8 12 12 C 1.53006 * 109.47354 * 179.97438 * 10 9 8 13 13 S 1.81406 * 109.46553 * 59.99971 * 12 10 9 14 14 O 1.42103 * 110.54237 * 68.38158 * 13 12 10 15 15 O 1.42099 * 110.54329 * 291.62413 * 13 12 10 16 16 O 1.52204 * 104.44642 * 180.02562 * 13 12 10 17 17 C 1.35998 * 114.00004 * 74.99864 * 16 13 12 18 18 C 1.38884 * 120.04293 * 269.97808 * 17 16 13 19 19 F 1.35099 * 120.03406 * 0.02562 * 18 17 16 20 20 C 1.38333 * 119.93378 * 180.02562 * 18 17 16 21 21 C 1.50704 * 119.99638 * 180.02562 * 20 18 17 22 22 O 1.42903 * 109.46512 * 113.40033 * 21 20 18 23 23 Si 1.86295 * 109.47063 * 233.39694 * 21 20 18 24 24 C 1.38442 * 120.00672 * 359.74951 * 20 18 17 25 25 F 1.35089 * 119.96514 * 180.27124 * 24 20 18 26 26 C 1.38455 * 120.07205 * 0.50653 * 24 20 18 27 27 C 1.38190 * 120.06725 * 359.49032 * 26 24 20 28 28 C 1.53007 * 109.47157 * 59.99795 * 10 9 8 29 29 C 1.52994 * 109.47095 * 300.00235 * 28 10 9 30 30 H 1.09002 * 109.47397 * 180.02562 * 1 2 3 31 31 H 1.09006 * 109.47562 * 300.00051 * 1 2 3 32 32 H 1.09005 * 109.47493 * 60.00316 * 1 2 3 33 33 H 1.08993 * 109.47423 * 239.99746 * 2 1 3 34 34 H 1.09001 * 109.47126 * 119.99328 * 2 1 3 35 35 H 1.08999 * 109.47398 * 300.00387 * 8 6 4 36 36 H 1.09004 * 109.47058 * 59.99659 * 8 6 4 37 37 H 1.08998 * 109.47156 * 180.02562 * 9 8 6 38 38 H 1.09004 * 109.46700 * 59.99858 * 9 8 6 39 39 H 1.08997 * 109.46936 * 300.00805 * 12 10 9 40 40 H 1.08992 * 109.47620 * 179.97438 * 12 10 9 41 41 H 1.08999 * 109.47468 * 353.40425 * 21 20 18 42 42 H 0.96701 * 114.00366 * 60.00336 * 22 21 20 43 43 H 1.48500 * 110.00122 * 63.71100 * 23 21 20 44 44 H 1.48506 * 109.99808 * 185.02402 * 23 21 20 45 45 H 1.07999 * 119.96798 * 179.76470 * 26 24 20 46 46 H 1.08009 * 119.99886 * 180.27883 * 27 26 24 47 47 H 1.09007 * 109.46667 * 60.00045 * 28 10 9 48 48 H 1.09005 * 109.47208 * 179.97438 * 28 10 9 49 49 H 1.09005 * 109.46903 * 180.02562 * 29 28 10 50 50 H 1.09007 * 109.46689 * 299.99388 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9206 2.9375 0.0000 7 1 3.5851 3.4690 -0.8905 8 6 3.4485 3.6852 1.2485 9 6 4.0338 5.0988 1.2482 10 6 5.5616 5.0182 1.2494 11 9 5.9918 4.3356 2.3923 12 6 6.1470 6.4318 1.2485 13 16 5.5871 7.3189 2.7286 14 8 6.1702 6.7577 3.8966 15 8 4.1915 7.5762 2.6575 16 8 6.2283 8.6943 2.6121 17 6 5.6386 9.5034 1.6916 18 6 6.0825 9.4985 0.3756 19 9 7.1004 8.6896 0.0084 20 6 5.4815 10.3227 -0.5587 21 6 5.9617 10.3181 -1.9872 22 8 4.9372 9.7904 -2.8322 23 14 6.3643 12.0595 -2.5126 24 6 4.4351 11.1476 -0.1829 25 9 3.8451 11.9482 -1.0972 26 6 3.9958 11.1566 1.1301 27 6 4.5940 10.3344 2.0660 28 6 6.0338 4.2704 0.0008 29 6 5.4485 2.8569 0.0010 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3634 0.5139 0.8900 32 1 -0.3634 0.5138 -0.8900 33 1 1.8933 -0.5138 -0.8899 34 1 1.8933 -0.5137 0.8901 35 1 2.3600 3.7422 1.2480 36 1 3.7840 3.1536 2.1390 37 1 3.6977 5.6313 2.1380 38 1 3.6986 5.6306 0.3577 39 1 5.8118 6.9633 0.3579 40 1 7.2354 6.3744 1.2498 41 1 6.8546 9.6983 -2.0684 42 1 4.1115 10.2932 -2.8104 43 1 7.4894 12.5879 -1.7000 44 1 6.7227 12.0852 -3.9535 45 1 3.1819 11.8036 1.4222 46 1 4.2475 10.3391 3.0889 47 1 5.6987 4.8023 -0.8897 48 1 7.1224 4.2134 0.0013 49 1 5.7853 2.3240 -0.8883 50 1 5.7837 2.3250 0.8915 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_9576490_16464698.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:55:59 Heat of formation + Delta-G solvation = -320.577018 kcal Electronic energy + Delta-G solvation = -44348.116241 eV Core-core repulsion = 38214.208632 eV Total energy + Delta-G solvation = -6133.907609 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 439.113 amu Computer time = 3.25 seconds Orbital eigenvalues (eV) -50.82938 -50.76753 -49.08084 -42.39624 -41.65746 -39.89990 -39.16357 -38.46953 -37.90764 -37.52034 -37.36301 -34.27662 -33.20749 -32.66593 -32.18972 -31.44286 -29.20732 -27.62461 -25.26182 -25.00413 -24.29043 -24.05471 -23.56644 -22.12279 -21.72325 -20.93216 -20.02090 -19.76289 -19.68820 -19.18723 -18.69909 -18.34478 -18.21021 -17.80923 -17.62127 -17.59033 -17.32853 -17.12634 -16.97789 -16.90778 -16.59961 -16.27745 -16.23499 -15.97720 -15.73168 -15.47288 -15.25622 -15.01301 -14.92703 -14.62193 -14.54344 -14.38041 -14.22171 -14.12640 -13.91873 -13.83113 -13.75281 -13.65086 -13.56364 -13.42148 -13.27791 -13.26163 -13.17185 -13.14466 -12.87258 -12.70876 -12.66820 -12.50631 -12.30920 -12.26584 -11.99697 -11.79631 -11.49300 -11.30260 -11.18121 -11.12359 -10.43255 -10.33097 -5.15164 -1.47940 -0.78119 -0.71968 0.60445 0.91428 1.21298 1.40358 1.56242 1.62979 1.77573 2.04208 2.21005 2.47675 2.52724 2.70277 2.73151 2.95182 3.03329 3.12775 3.16823 3.24909 3.28738 3.39214 3.49219 3.56554 3.69711 3.76291 3.88612 3.93236 3.96487 4.00103 4.04021 4.08542 4.13300 4.14840 4.17579 4.23821 4.30030 4.36096 4.43258 4.47019 4.51669 4.64369 4.70878 4.73255 4.80912 4.84207 4.89254 4.99980 5.01698 5.02733 5.15836 5.49133 6.14749 6.76977 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.467 3.533 5 O -0.503 6.503 6 C -0.082 4.082 7 H 0.114 0.886 8 C -0.111 4.111 9 C -0.169 4.169 10 C 0.137 3.863 11 F -0.189 7.189 12 C -0.683 4.683 13 S 2.588 3.412 14 O -0.899 6.899 15 O -0.937 6.937 16 O -0.651 6.651 17 C 0.027 3.973 18 C 0.131 3.869 19 F -0.112 7.112 20 C -0.170 4.170 21 C -0.071 4.071 22 O -0.528 6.528 23 Si 0.685 3.315 24 C 0.150 3.850 25 F -0.100 7.100 26 C -0.130 4.130 27 C -0.030 4.030 28 C -0.128 4.128 29 C -0.109 4.109 30 H 0.081 0.919 31 H 0.068 0.932 32 H 0.067 0.933 33 H 0.070 0.930 34 H 0.071 0.929 35 H 0.093 0.907 36 H 0.081 0.919 37 H 0.098 0.902 38 H 0.102 0.898 39 H 0.152 0.848 40 H 0.157 0.843 41 H 0.128 0.872 42 H 0.381 0.619 43 H -0.248 1.248 44 H -0.238 1.238 45 H 0.170 0.830 46 H 0.169 0.831 47 H 0.091 0.909 48 H 0.089 0.911 49 H 0.085 0.915 50 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.129 5.927 -3.558 8.608 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.309 3.691 5 O -0.390 6.390 6 C -0.101 4.101 7 H 0.132 0.868 8 C -0.148 4.148 9 C -0.206 4.206 10 C 0.118 3.882 11 F -0.169 7.169 12 C -0.809 4.809 13 S 2.682 3.318 14 O -0.897 6.897 15 O -0.936 6.936 16 O -0.609 6.609 17 C -0.016 4.016 18 C 0.109 3.891 19 F -0.090 7.090 20 C -0.172 4.172 21 C -0.181 4.181 22 O -0.333 6.333 23 Si 0.583 3.417 24 C 0.129 3.871 25 F -0.078 7.078 26 C -0.149 4.149 27 C -0.050 4.050 28 C -0.166 4.166 29 C -0.147 4.147 30 H 0.100 0.900 31 H 0.087 0.913 32 H 0.086 0.914 33 H 0.089 0.911 34 H 0.089 0.911 35 H 0.112 0.888 36 H 0.099 0.901 37 H 0.116 0.884 38 H 0.120 0.880 39 H 0.170 0.830 40 H 0.175 0.825 41 H 0.145 0.855 42 H 0.229 0.771 43 H -0.172 1.172 44 H -0.162 1.162 45 H 0.188 0.812 46 H 0.186 0.814 47 H 0.109 0.891 48 H 0.108 0.892 49 H 0.104 0.896 50 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -3.955 5.851 -3.297 7.794 hybrid contribution 0.860 -1.226 -0.400 1.550 sum -3.095 4.625 -3.697 6.682 Atomic orbital electron populations 1.21821 0.92295 1.03268 1.03667 1.23086 0.95612 0.79824 1.02767 1.86499 1.24298 1.32780 1.83785 1.23598 0.80748 0.92415 0.72322 1.90694 1.60464 1.43044 1.44833 1.21169 0.96657 0.90223 1.02089 0.86764 1.21496 1.02383 0.94019 0.96947 1.22657 0.91805 0.99548 1.06604 1.20491 0.94925 0.87328 0.85464 1.92985 1.91203 1.81111 1.51610 1.31624 1.14890 1.09667 1.24671 1.05904 0.74803 0.74185 0.76925 1.93713 1.77975 1.75525 1.42475 1.93661 1.31644 1.81235 1.87014 1.85837 1.70482 1.43379 1.61220 1.18008 0.98637 1.00173 0.84757 1.17145 0.88395 0.92734 0.90794 1.91581 1.55945 1.69618 1.91846 1.20293 0.99149 0.99186 0.98609 1.25055 0.94835 1.13153 0.85036 1.86586 1.25484 1.56662 1.64588 0.94669 0.87658 0.77294 0.82069 1.17221 0.92301 0.90308 0.87239 1.91399 1.81081 1.70418 1.64881 1.21235 1.02310 1.01124 0.90196 1.21211 0.90827 0.90798 1.02132 1.22092 1.02626 0.95857 0.96054 1.21484 0.91666 0.96352 1.05187 0.90019 0.91321 0.91369 0.91119 0.91072 0.88797 0.90080 0.88359 0.87995 0.83008 0.82519 0.85500 0.77104 1.17215 1.16167 0.81236 0.81378 0.89079 0.89217 0.89630 0.89727 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 29. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.23 10.29 37.15 0.38 0.61 16 2 C 0.06 0.03 6.19 37.15 0.23 0.26 16 3 O -0.36 -0.62 10.12 -39.26 -0.40 -1.02 16 4 C 0.47 1.08 7.26 36.00 0.26 1.35 16 5 O -0.50 -2.66 15.73 -18.75 -0.29 -2.96 16 6 C -0.08 0.03 2.63 -91.78 -0.24 -0.21 16 7 H 0.11 -0.29 8.14 -51.93 -0.42 -0.72 16 8 C -0.11 0.06 5.01 -26.74 -0.13 -0.07 16 9 C -0.17 0.14 4.52 -26.73 -0.12 0.02 16 10 C 0.14 -0.01 0.88 -90.61 -0.08 -0.08 16 11 F -0.19 -0.54 15.05 2.25 0.03 -0.51 16 12 C -0.68 0.69 3.92 37.16 0.15 0.84 16 13 S 2.59 4.23 4.51 -107.50 -0.49 3.75 16 14 O -0.90 -5.02 17.61 -67.03 -1.18 -6.20 16 15 O -0.94 -1.52 13.88 -67.04 -0.93 -2.45 16 16 O -0.65 -0.65 9.92 -52.06 -0.52 -1.17 16 17 C 0.03 -0.01 4.80 -39.20 -0.19 -0.20 16 18 C 0.13 -0.14 6.28 -39.31 -0.25 -0.38 16 19 F -0.11 0.10 13.62 2.25 0.03 0.13 16 20 C -0.17 0.37 4.65 -104.51 -0.49 -0.12 16 21 C -0.07 0.14 2.78 36.01 0.10 0.24 16 22 O -0.53 0.91 12.88 -35.23 -0.45 0.46 16 23 Si 0.69 -1.45 30.30 -169.99 -5.15 -6.60 16 24 C 0.15 -0.56 6.52 -39.43 -0.26 -0.82 16 25 F -0.10 0.49 13.52 2.25 0.03 0.52 16 26 C -0.13 0.59 10.02 -39.52 -0.40 0.19 16 27 C -0.03 0.08 9.04 -39.45 -0.36 -0.28 16 28 C -0.13 0.19 5.00 -26.73 -0.13 0.06 16 29 C -0.11 0.01 4.37 -26.74 -0.12 -0.11 16 30 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 31 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 32 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 33 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 34 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 35 H 0.09 -0.14 8.11 -51.93 -0.42 -0.56 16 36 H 0.08 0.04 7.80 -51.93 -0.41 -0.36 16 37 H 0.10 -0.01 5.46 -51.93 -0.28 -0.30 16 38 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 39 H 0.15 -0.50 6.09 -51.93 -0.32 -0.81 16 40 H 0.16 -0.38 8.14 -51.93 -0.42 -0.80 16 41 H 0.13 -0.22 6.97 -51.93 -0.36 -0.58 16 42 H 0.38 -1.95 7.57 45.56 0.34 -1.61 16 43 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 44 H -0.24 -0.15 7.11 56.52 0.40 0.26 16 45 H 0.17 -1.26 8.06 -52.49 -0.42 -1.68 16 46 H 0.17 -0.73 8.06 -52.48 -0.42 -1.15 16 47 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 48 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 49 H 0.09 -0.01 8.10 -51.93 -0.42 -0.43 16 50 H 0.08 0.14 7.76 -51.93 -0.40 -0.27 16 LS Contribution 420.90 15.07 6.34 6.34 Total: 0.00 -10.45 420.90 -11.15 -21.60 By element: Atomic # 1 Polarization: -6.67 SS G_CDS: -6.54 Total: -13.20 kcal Atomic # 6 Polarization: 2.94 SS G_CDS: -1.64 Total: 1.31 kcal Atomic # 8 Polarization: -9.56 SS G_CDS: -3.77 Total: -13.34 kcal Atomic # 9 Polarization: 0.04 SS G_CDS: 0.10 Total: 0.14 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.15 Total: -6.60 kcal Atomic # 16 Polarization: 4.23 SS G_CDS: -0.49 Total: 3.75 kcal Total LS contribution 6.34 Total: 6.34 kcal Total: -10.45 -11.15 -21.60 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_9576490_16464698.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -298.977 kcal (2) G-P(sol) polarization free energy of solvation -10.454 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -309.431 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.146 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.600 kcal (6) G-S(sol) free energy of system = (1) + (5) -320.577 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.25 seconds