Wall clock time and date at job start Mon Mar 8 2021 11:39:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86303 * 109.46847 * 2 1 4 4 C 1.50701 * 109.47113 * 240.00412 * 2 1 3 5 5 C 1.38438 * 119.99970 * 66.56664 * 4 2 1 6 6 F 1.35102 * 119.96409 * 359.97438 * 5 4 2 7 7 C 1.38455 * 120.07522 * 180.02562 * 5 4 2 8 8 C 1.38189 * 120.06880 * 359.97438 * 7 5 4 9 9 C 1.38633 * 119.99786 * 0.02562 * 8 7 5 10 10 O 1.35997 * 120.04065 * 180.02562 * 9 8 7 11 11 S 1.52198 * 114.00062 * 89.99696 * 10 9 8 12 12 O 1.42096 * 104.27859 * 318.92923 * 11 10 9 13 13 O 1.42104 * 104.27480 * 191.07121 * 11 10 9 14 14 C 1.81403 * 104.45062 * 75.00012 * 11 10 9 15 15 H 1.09002 * 112.84742 * 311.19480 * 14 11 10 16 16 C 1.53782 * 113.61155 * 82.50275 * 14 11 10 17 17 C 1.53779 * 87.08236 * 89.11848 * 16 14 11 18 18 H 1.09003 * 113.68472 * 270.87098 * 17 16 14 19 19 C 1.50693 * 113.61756 * 139.97842 * 17 16 14 20 20 C 1.38240 * 119.99962 * 142.49617 * 19 17 16 21 21 C 1.38242 * 119.99768 * 180.27695 * 20 19 17 22 22 C 1.38234 * 120.00116 * 359.49286 * 21 20 19 23 23 C 1.38239 * 119.99950 * 0.51189 * 22 21 20 24 24 C 1.38234 * 120.00142 * 322.52665 * 19 17 16 25 25 C 1.53778 * 113.61250 * 179.97438 * 14 11 10 26 26 C 1.38339 * 119.99556 * 246.83839 * 4 2 1 27 27 F 1.35105 * 120.03419 * 0.03044 * 26 4 2 28 28 H 0.96703 * 114.00278 * 60.00237 * 1 2 3 29 29 H 1.08995 * 109.47656 * 120.00099 * 2 1 3 30 30 H 1.48495 * 109.99970 * 54.87445 * 3 2 1 31 31 H 1.48502 * 109.99779 * 176.19045 * 3 2 1 32 32 H 1.07997 * 119.96823 * 179.97438 * 7 5 4 33 33 H 1.08005 * 120.00046 * 179.97438 * 8 7 5 34 34 H 1.08998 * 113.61770 * 334.56304 * 16 14 11 35 35 H 1.09002 * 113.61027 * 203.66637 * 16 14 11 36 36 H 1.07991 * 119.99864 * 0.02562 * 20 19 17 37 37 H 1.07996 * 119.99612 * 179.72947 * 21 20 19 38 38 H 1.07997 * 120.00486 * 180.22860 * 22 21 20 39 39 H 1.08000 * 120.00086 * 179.72000 * 23 22 21 40 40 H 1.08001 * 119.99983 * 359.97438 * 24 19 17 41 41 H 1.09002 * 113.61181 * 156.34043 * 25 14 11 42 42 H 1.09000 * 113.69482 * 25.43868 * 25 14 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.7125 -0.1633 -2.4833 6 9 1.0481 1.0070 -2.6019 7 6 2.1729 -0.8149 -3.6149 8 6 2.8522 -2.0124 -3.4962 9 6 3.0730 -2.5628 -2.2431 10 8 3.7419 -3.7410 -2.1252 11 16 5.2489 -3.5853 -1.9795 12 8 5.5855 -2.5561 -2.8996 13 8 5.7543 -4.9039 -2.1383 14 6 5.4823 -3.0152 -0.2733 15 1 4.8306 -2.1812 -0.0129 16 6 5.4750 -4.1520 0.7624 17 6 6.9919 -4.2626 0.5355 18 1 7.2658 -4.9460 -0.2683 19 6 7.7756 -4.5024 1.8001 20 6 8.8749 -5.3404 1.7835 21 6 9.5904 -5.5650 2.9449 22 6 9.2128 -4.9433 4.1204 23 6 8.1134 -4.1054 4.1370 24 6 7.3948 -3.8851 2.9768 25 6 6.9556 -2.7876 0.1040 26 6 2.6061 -1.9118 -1.1085 27 9 2.8146 -2.4492 0.1134 28 1 -0.3934 0.4417 -0.7651 29 1 1.7924 -0.5138 0.8899 30 1 1.4622 2.5029 1.1413 31 1 3.5319 1.7713 0.0927 32 1 2.0009 -0.3868 -4.5914 33 1 3.2105 -2.5199 -4.3797 34 1 4.9198 -5.0329 0.4400 35 1 5.2064 -3.8255 1.7671 36 1 9.1723 -5.8228 0.8642 37 1 10.4466 -6.2231 2.9328 38 1 9.7739 -5.1158 5.0269 39 1 7.8158 -3.6233 5.0564 40 1 6.5359 -3.2304 2.9898 41 1 7.0920 -2.0880 0.9287 42 1 7.5971 -2.5667 -0.7491 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_9576490_17781816.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:39:35 Heat of formation + Delta-G solvation = -121.993182 kcal Electronic energy + Delta-G solvation = -34104.259533 eV Core-core repulsion = 29167.715961 eV Total energy + Delta-G solvation = -4936.543573 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.077 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -50.75642 -50.71622 -42.32994 -41.21404 -39.83130 -39.00793 -38.35911 -37.84637 -37.32245 -33.15288 -32.31078 -31.83012 -31.38268 -27.64721 -27.18242 -27.01617 -25.05525 -24.04512 -23.83867 -23.08678 -21.79508 -21.01800 -19.91971 -19.69458 -19.31465 -19.23822 -18.28907 -18.11822 -17.89149 -17.59837 -17.30937 -16.97449 -16.58801 -16.48363 -16.41890 -16.06346 -15.93957 -15.70132 -15.50854 -15.30655 -14.90552 -14.58496 -14.53268 -14.35070 -14.28212 -14.08750 -13.85090 -13.82609 -13.57024 -13.43583 -13.38359 -13.30887 -13.27524 -13.12289 -12.64968 -12.55101 -12.23178 -12.04449 -11.94891 -11.57941 -11.46253 -11.05373 -10.37066 -10.27318 -9.85818 -9.64375 -5.12454 -1.37229 -0.71652 -0.63219 0.36354 0.46215 0.67734 0.96394 1.42889 1.59041 1.77171 2.13399 2.31531 2.52651 2.58845 2.73933 2.78459 2.85486 3.04602 3.10799 3.22589 3.34859 3.45240 3.54565 3.60505 3.83742 3.91299 4.00039 4.06745 4.14142 4.18209 4.20102 4.24964 4.30217 4.33234 4.40430 4.41042 4.49132 4.54460 4.56809 4.63187 4.70866 4.99137 5.04848 5.07923 5.11618 5.52838 5.60052 5.65860 6.05318 6.20550 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.070 4.070 3 Si 0.682 3.318 4 C -0.172 4.172 5 C 0.149 3.851 6 F -0.100 7.100 7 C -0.131 4.131 8 C -0.032 4.032 9 C 0.030 3.970 10 O -0.650 6.650 11 S 2.601 3.399 12 O -0.942 6.942 13 O -0.910 6.910 14 C -0.663 4.663 15 H 0.146 0.854 16 C -0.084 4.084 17 C -0.092 4.092 18 H 0.119 0.881 19 C -0.072 4.072 20 C -0.112 4.112 21 C -0.117 4.117 22 C -0.121 4.121 23 C -0.118 4.118 24 C -0.118 4.118 25 C -0.085 4.085 26 C 0.134 3.866 27 F -0.108 7.108 28 H 0.380 0.620 29 H 0.126 0.874 30 H -0.237 1.237 31 H -0.247 1.247 32 H 0.170 0.830 33 H 0.168 0.832 34 H 0.087 0.913 35 H 0.107 0.893 36 H 0.125 0.875 37 H 0.124 0.876 38 H 0.122 0.878 39 H 0.122 0.878 40 H 0.121 0.879 41 H 0.109 0.891 42 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.243 3.779 -1.297 4.184 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.180 4.180 3 Si 0.580 3.420 4 C -0.174 4.174 5 C 0.128 3.872 6 F -0.078 7.078 7 C -0.150 4.150 8 C -0.052 4.052 9 C -0.014 4.014 10 O -0.608 6.608 11 S 2.695 3.305 12 O -0.941 6.941 13 O -0.908 6.908 14 C -0.770 4.770 15 H 0.164 0.836 16 C -0.122 4.122 17 C -0.110 4.110 18 H 0.137 0.863 19 C -0.072 4.072 20 C -0.130 4.130 21 C -0.135 4.135 22 C -0.139 4.139 23 C -0.136 4.136 24 C -0.136 4.136 25 C -0.123 4.123 26 C 0.113 3.887 27 F -0.087 7.087 28 H 0.228 0.772 29 H 0.144 0.856 30 H -0.161 1.161 31 H -0.171 1.171 32 H 0.187 0.813 33 H 0.185 0.815 34 H 0.106 0.894 35 H 0.125 0.875 36 H 0.143 0.857 37 H 0.142 0.858 38 H 0.140 0.860 39 H 0.140 0.860 40 H 0.139 0.861 41 H 0.127 0.873 42 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -0.666 3.676 -0.883 3.839 hybrid contribution -0.073 -0.518 1.098 1.216 sum -0.739 3.159 0.215 3.251 Atomic orbital electron populations 1.86595 1.15815 1.81499 1.49331 1.25056 0.86143 1.10954 0.95811 0.94625 0.81160 0.76725 0.89468 1.20295 1.04067 0.96055 0.96979 1.17216 0.94242 0.83047 0.92653 1.91394 1.77203 1.43672 1.95550 1.21218 0.99245 0.95114 0.99391 1.21202 0.93694 0.94118 0.96157 1.17985 1.04867 0.84737 0.93768 1.85796 1.44730 1.39193 1.91078 1.05460 0.73063 0.75236 0.76743 1.93661 1.81414 1.60524 1.58492 1.93666 1.75463 1.36431 1.85225 1.32651 1.08869 1.11999 1.23450 0.83624 1.22649 0.96282 0.94805 0.98434 1.21936 0.94721 0.97229 0.97161 0.86295 1.19499 0.96002 0.97687 0.93981 1.21136 0.95137 0.98119 0.98646 1.21210 0.99855 0.99617 0.92778 1.21225 0.97189 0.97216 0.98293 1.21167 0.95672 0.98608 0.98126 1.21007 1.00054 1.00123 0.92408 1.22646 0.88973 0.97669 1.03006 1.17130 0.99866 0.92042 0.79705 1.91570 1.92068 1.85024 1.39994 0.77164 0.85615 1.16097 1.17109 0.81268 0.81471 0.89403 0.87500 0.85700 0.85793 0.85954 0.85957 0.86073 0.87298 0.89816 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.20 12.88 -35.23 -0.45 -0.25 16 2 C -0.07 0.06 2.78 36.01 0.10 0.17 16 3 Si 0.68 -1.01 30.28 -169.99 -5.15 -6.16 16 4 C -0.17 0.18 4.65 -104.51 -0.49 -0.31 16 5 C 0.15 -0.40 6.52 -39.43 -0.26 -0.66 16 6 F -0.10 0.40 13.52 2.25 0.03 0.43 16 7 C -0.13 0.46 10.02 -39.52 -0.40 0.06 16 8 C -0.03 0.05 9.04 -39.45 -0.36 -0.31 16 9 C 0.03 0.02 4.80 -39.19 -0.19 -0.17 16 10 O -0.65 -1.10 9.92 -52.05 -0.52 -1.62 16 11 S 2.60 5.16 5.00 -107.50 -0.54 4.62 16 12 O -0.94 -2.97 16.26 -67.04 -1.09 -4.06 16 13 O -0.91 -4.08 16.42 -67.04 -1.10 -5.18 16 14 C -0.66 0.17 3.56 -25.92 -0.09 0.08 16 15 H 0.15 -0.23 5.41 -51.93 -0.28 -0.51 16 16 C -0.08 0.02 6.87 -25.92 -0.18 -0.16 16 17 C -0.09 -0.03 3.59 -91.00 -0.33 -0.36 16 18 H 0.12 0.08 6.97 -51.93 -0.36 -0.28 16 19 C -0.07 -0.07 5.29 -104.63 -0.55 -0.63 16 20 C -0.11 -0.13 9.71 -39.58 -0.38 -0.52 16 21 C -0.12 -0.10 10.05 -39.58 -0.40 -0.50 16 22 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 23 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 24 C -0.12 -0.07 8.61 -39.58 -0.34 -0.41 16 25 C -0.08 0.06 7.15 -25.95 -0.19 -0.13 16 26 C 0.13 0.02 6.34 -39.30 -0.25 -0.23 16 27 F -0.11 -0.03 13.41 2.25 0.03 0.00 16 28 H 0.38 -1.51 7.59 45.56 0.35 -1.16 16 29 H 0.13 -0.09 6.98 -51.93 -0.36 -0.46 16 30 H -0.24 -0.26 7.11 56.52 0.40 0.14 16 31 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 32 H 0.17 -1.10 8.06 -52.49 -0.42 -1.53 16 33 H 0.17 -0.56 8.06 -52.48 -0.42 -0.99 16 34 H 0.09 -0.03 8.09 -51.93 -0.42 -0.45 16 35 H 0.11 -0.16 6.31 -51.93 -0.33 -0.48 16 36 H 0.13 -0.02 8.05 -52.49 -0.42 -0.44 16 37 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 38 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 39 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 40 H 0.12 -0.13 6.66 -52.49 -0.35 -0.48 16 41 H 0.11 -0.18 7.72 -51.93 -0.40 -0.58 16 42 H 0.08 -0.12 8.10 -51.93 -0.42 -0.54 16 LS Contribution 363.16 15.07 5.47 5.47 Total: 0.00 -8.14 363.16 -12.71 -20.86 By element: Atomic # 1 Polarization: -4.79 SS G_CDS: -4.31 Total: -9.10 kcal Atomic # 6 Polarization: 0.07 SS G_CDS: -5.09 Total: -5.02 kcal Atomic # 8 Polarization: -7.94 SS G_CDS: -3.16 Total: -11.10 kcal Atomic # 9 Polarization: 0.37 SS G_CDS: 0.06 Total: 0.43 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.15 Total: -6.16 kcal Atomic # 16 Polarization: 5.16 SS G_CDS: -0.54 Total: 4.62 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -8.14 -12.71 -20.86 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_9576490_17781816.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.136 kcal (2) G-P(sol) polarization free energy of solvation -8.145 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.280 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.713 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.858 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.993 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds