Wall clock time and date at job start Mon Mar 8 2021 14:43:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.47001 * 2 1 4 4 C 1.50698 * 109.46862 * 119.99827 * 2 1 3 5 5 C 1.38235 * 120.00365 * 65.00124 * 4 2 1 6 6 C 1.38237 * 120.00397 * 179.97438 * 5 4 2 7 7 C 1.38237 * 119.99608 * 359.97438 * 6 5 4 8 8 S 1.76203 * 119.99729 * 180.02562 * 7 6 5 9 9 O 1.42104 * 106.40146 * 336.46247 * 8 7 6 10 10 O 1.42095 * 106.40229 * 203.54504 * 8 7 6 11 11 N 1.65602 * 107.21635 * 90.00082 * 8 7 6 12 12 C 1.46498 * 119.99612 * 65.28001 * 11 8 7 13 13 H 1.08996 * 112.85084 * 13.52359 * 12 11 8 14 14 C 1.53780 * 113.61362 * 144.72117 * 12 11 8 15 15 C 1.53779 * 87.08147 * 89.11556 * 14 12 11 16 16 H 1.09000 * 113.61662 * 270.80087 * 15 14 12 17 17 C 1.50700 * 113.61747 * 139.97905 * 15 14 12 18 18 C 1.38242 * 119.98781 * 299.72441 * 17 15 14 19 19 C 1.38218 * 120.01016 * 179.76580 * 18 17 15 20 20 C 1.38347 * 119.98659 * 0.52737 * 19 18 17 21 21 Cl 1.73603 * 120.01056 * 179.70227 * 20 19 18 22 22 C 1.38352 * 119.97668 * 359.72717 * 20 19 18 23 23 C 1.38214 * 119.98427 * 359.97438 * 22 20 19 24 24 C 1.53782 * 87.08321 * 25.43333 * 15 14 12 25 25 C 1.38232 * 120.00116 * 0.27904 * 7 6 5 26 26 C 1.38231 * 120.00148 * 359.53678 * 25 7 6 27 27 H 0.96701 * 114.00159 * 299.99779 * 1 2 3 28 28 H 1.08997 * 109.47328 * 239.99888 * 2 1 3 29 29 H 1.48496 * 109.99901 * 299.99843 * 3 2 1 30 30 H 1.48499 * 110.00230 * 61.31979 * 3 2 1 31 31 H 1.08004 * 119.99553 * 0.02562 * 5 4 2 32 32 H 1.07999 * 119.99949 * 180.02562 * 6 5 4 33 33 H 0.97001 * 119.99942 * 244.99525 * 11 8 7 34 34 H 1.09006 * 113.61332 * 203.66166 * 14 12 11 35 35 H 1.08995 * 113.61837 * 334.56864 * 14 12 11 36 36 H 1.08000 * 119.98840 * 0.02562 * 18 17 15 37 37 H 1.07997 * 120.00316 * 180.25934 * 19 18 17 38 38 H 1.08001 * 120.00456 * 180.02562 * 22 20 19 39 39 H 1.08001 * 119.98981 * 179.97438 * 23 22 20 40 40 H 1.09006 * 113.61251 * 220.02708 * 24 15 14 41 41 H 1.08991 * 113.61651 * 89.11417 * 24 15 14 42 42 H 1.08001 * 119.99701 * 179.72178 * 25 7 6 43 43 H 1.08001 * 120.00266 * 180.23536 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6847 -2.0601 1.3985 6 6 2.1459 -2.7119 2.5270 7 6 2.8541 -2.0139 3.4872 8 16 3.4426 -2.8448 4.9253 9 8 2.6132 -3.9858 5.0971 10 8 3.6099 -1.8482 5.9243 11 7 4.9573 -3.4159 4.5761 12 6 6.0516 -2.4777 4.3151 13 1 5.8109 -1.4551 4.6057 14 6 7.4152 -2.9614 4.8361 15 6 7.6054 -3.6456 3.4721 16 1 7.2172 -4.6635 3.4363 17 6 9.0077 -3.5347 2.9313 18 6 9.5567 -2.2902 2.6848 19 6 10.8445 -2.1878 2.1933 20 6 11.5801 -3.3314 1.9379 21 17 13.1949 -3.2037 1.3134 22 6 11.0282 -4.5767 2.1799 23 6 9.7425 -4.6777 2.6771 24 6 6.6393 -2.5953 2.8988 25 6 3.0962 -0.6630 3.3218 26 6 2.6383 -0.0121 2.1915 27 1 -0.3933 0.4417 0.7651 28 1 1.7924 -0.5138 -0.8899 29 1 1.5615 2.4678 -1.2085 30 1 1.5879 2.4586 1.2242 31 1 1.1324 -2.6057 0.6476 32 1 1.9535 -3.7665 2.6579 33 1 5.1207 -4.3717 4.5485 34 1 8.1232 -2.1536 5.0218 35 1 7.3414 -3.6607 5.6688 36 1 8.9808 -1.3977 2.8802 37 1 11.2749 -1.2154 2.0047 38 1 11.6021 -5.4697 1.9810 39 1 9.3114 -5.6498 2.8656 40 1 5.9390 -2.9993 2.1677 41 1 7.1351 -1.6876 2.5550 42 1 3.6457 -0.1168 4.0742 43 1 2.8307 1.0425 2.0604 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_40_9610468_13421422.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:43:35 Heat of formation + Delta-G solvation = -27.325508 kcal Electronic energy + Delta-G solvation = -29468.615711 eV Core-core repulsion = 25213.004058 eV Total energy + Delta-G solvation = -4255.611654 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.068 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -41.18139 -40.66955 -39.29806 -38.37738 -37.84970 -37.34024 -37.02097 -34.17318 -33.02008 -32.17429 -32.00940 -31.18296 -27.23910 -26.53617 -25.94149 -24.08088 -23.82048 -22.98444 -22.59042 -20.86914 -20.14460 -19.27772 -18.76151 -18.26072 -18.07651 -17.25213 -16.77042 -16.62219 -16.41331 -16.27224 -16.12737 -15.81914 -15.54555 -15.32362 -14.92960 -14.75645 -14.56323 -14.48944 -14.32534 -14.00252 -13.91166 -13.74121 -13.66058 -13.32543 -13.27947 -13.21242 -12.84868 -12.65969 -12.55014 -12.53997 -12.47528 -11.91523 -11.88607 -11.75676 -11.61995 -11.53464 -11.10696 -10.73101 -10.49160 -10.33871 -10.11514 -9.95368 -9.43056 -4.96610 -0.73005 -0.35301 0.18654 0.22105 0.37825 1.21577 1.23188 1.56790 1.90264 1.93948 2.34977 2.65744 2.73294 3.22424 3.31724 3.50935 3.56397 3.72596 3.75567 3.78766 3.85230 3.92621 4.00309 4.06641 4.19767 4.22112 4.32229 4.37423 4.42392 4.45453 4.49675 4.63799 4.77174 4.81793 4.86789 4.92362 4.96901 5.00631 5.01587 5.08066 5.16093 5.20344 5.27413 5.30871 5.33817 5.52623 5.70104 5.72637 5.90576 6.07289 6.38480 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.092 4.092 3 Si 0.772 3.228 4 C -0.061 4.061 5 C -0.122 4.122 6 C -0.026 4.026 7 C -0.673 4.673 8 S 2.714 3.286 9 O -0.990 6.990 10 O -0.982 6.982 11 N -1.087 6.087 12 C 0.117 3.883 13 H 0.118 0.882 14 C -0.133 4.133 15 C -0.074 4.074 16 H 0.107 0.893 17 C -0.066 4.066 18 C -0.104 4.104 19 C -0.117 4.117 20 C -0.058 4.058 21 Cl -0.086 7.086 22 C -0.121 4.121 23 C -0.112 4.112 24 C -0.141 4.141 25 C -0.020 4.020 26 C -0.140 4.140 27 H 0.387 0.613 28 H 0.133 0.867 29 H -0.304 1.304 30 H -0.279 1.279 31 H 0.140 0.860 32 H 0.147 0.853 33 H 0.428 0.572 34 H 0.106 0.894 35 H 0.078 0.922 36 H 0.157 0.843 37 H 0.141 0.859 38 H 0.135 0.865 39 H 0.145 0.855 40 H 0.081 0.919 41 H 0.112 0.888 42 H 0.160 0.840 43 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.855 1.509 -2.188 3.901 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.200 4.200 3 Si 0.677 3.323 4 C -0.062 4.062 5 C -0.141 4.141 6 C -0.045 4.045 7 C -0.762 4.762 8 S 2.805 3.195 9 O -0.980 6.980 10 O -0.972 6.972 11 N -0.848 5.848 12 C 0.009 3.991 13 H 0.135 0.865 14 C -0.172 4.172 15 C -0.093 4.093 16 H 0.126 0.874 17 C -0.066 4.066 18 C -0.122 4.122 19 C -0.136 4.136 20 C -0.084 4.084 21 Cl -0.057 7.057 22 C -0.140 4.140 23 C -0.130 4.130 24 C -0.180 4.180 25 C -0.039 4.039 26 C -0.158 4.158 27 H 0.237 0.763 28 H 0.151 0.849 29 H -0.232 1.232 30 H -0.206 1.206 31 H 0.158 0.842 32 H 0.165 0.835 33 H 0.265 0.735 34 H 0.125 0.875 35 H 0.097 0.903 36 H 0.175 0.825 37 H 0.159 0.841 38 H 0.153 0.847 39 H 0.162 0.838 40 H 0.100 0.900 41 H 0.131 0.869 42 H 0.178 0.822 43 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 2.393 2.114 -1.971 3.752 hybrid contribution -0.793 -0.597 -0.415 1.076 sum 1.600 1.516 -2.387 3.249 Atomic orbital electron populations 1.86606 1.18174 1.80396 1.50226 1.25413 0.83690 1.12281 0.98665 0.94045 0.90040 0.71645 0.76566 1.20739 0.94917 0.94703 0.95839 1.21319 1.00065 0.94419 0.98294 1.21116 0.91515 1.00540 0.91377 1.30810 1.16607 1.06787 1.21974 1.01067 0.72292 0.72542 0.73585 1.93574 1.67106 1.51275 1.86095 1.93575 1.85980 1.61663 1.55950 1.55058 1.24095 1.17303 1.88314 1.21865 0.86796 0.93204 0.97233 0.86456 1.23448 0.95812 1.01367 0.96548 1.21642 0.90456 1.00758 0.96410 0.87448 1.20024 0.96272 0.92860 0.97413 1.21267 0.94111 0.98602 0.98242 1.21289 0.94951 0.97726 0.99603 1.21183 0.87185 0.96089 1.03977 1.98381 1.22883 1.98519 1.85949 1.21243 0.96532 0.96276 0.99940 1.21292 0.93272 0.99797 0.98601 1.23653 0.98005 1.00088 0.96299 1.21150 0.94242 0.91779 0.96700 1.21414 0.99316 1.01074 0.94022 0.76313 0.84898 1.23241 1.20556 0.84167 0.83536 0.73457 0.87531 0.90315 0.82503 0.84116 0.84735 0.83760 0.90033 0.86937 0.82249 0.82748 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.06 12.83 -148.98 -1.91 -1.86 16 2 C -0.09 0.38 2.80 71.24 0.20 0.58 16 3 Si 0.77 -4.12 29.88 68.60 2.05 -2.07 16 4 C -0.06 0.22 5.35 -19.86 -0.11 0.11 16 5 C -0.12 0.26 9.69 22.27 0.22 0.48 16 6 C -0.03 0.04 9.52 22.27 0.21 0.25 16 7 C -0.67 1.24 5.95 22.27 0.13 1.38 16 8 S 2.71 0.15 5.71 -56.49 -0.32 -0.17 16 9 O -0.99 -6.90 17.28 -128.00 -2.21 -9.11 16 10 O -0.98 -5.63 16.79 -128.00 -2.15 -7.78 16 11 N -1.09 7.42 5.73 -167.20 -0.96 6.46 16 12 C 0.12 -1.06 4.51 45.52 0.21 -0.86 16 13 H 0.12 -1.24 7.76 -2.39 -0.02 -1.26 16 14 C -0.13 1.20 7.33 31.12 0.23 1.43 16 15 C -0.07 0.68 3.80 -11.01 -0.04 0.64 16 16 H 0.11 -1.10 8.06 -2.39 -0.02 -1.12 16 17 C -0.07 0.36 5.29 -19.86 -0.11 0.25 16 18 C -0.10 0.59 8.62 22.27 0.19 0.78 16 19 C -0.12 0.24 9.83 22.29 0.22 0.46 16 20 C -0.06 -0.06 6.32 22.32 0.14 0.08 16 21 Cl -0.09 -0.25 28.96 -2.72 -0.08 -0.33 16 22 C -0.12 0.06 9.83 22.29 0.22 0.28 16 23 C -0.11 0.38 9.71 22.27 0.22 0.60 16 24 C -0.14 1.53 7.25 31.12 0.23 1.76 16 25 C -0.02 0.08 9.52 22.27 0.21 0.29 16 26 C -0.14 0.71 8.67 22.27 0.19 0.91 16 27 H 0.39 -2.07 8.70 -74.06 -0.64 -2.71 16 28 H 0.13 -0.82 7.96 -2.39 -0.02 -0.84 16 29 H -0.30 -0.97 7.11 99.48 0.71 -0.27 16 30 H -0.28 0.49 7.01 99.48 0.70 1.18 16 31 H 0.14 -0.49 8.06 -2.91 -0.02 -0.51 16 32 H 0.15 -0.44 7.62 -2.91 -0.02 -0.47 16 33 H 0.43 -4.19 8.79 -96.74 -0.85 -5.04 16 34 H 0.11 -1.08 7.73 -2.38 -0.02 -1.10 16 35 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 36 H 0.16 -1.73 6.64 -2.91 -0.02 -1.75 16 37 H 0.14 -0.60 8.06 -2.91 -0.02 -0.62 16 38 H 0.13 -0.26 8.06 -2.91 -0.02 -0.28 16 39 H 0.14 -1.00 8.05 -2.91 -0.02 -1.02 16 40 H 0.08 -0.84 8.14 -2.38 -0.02 -0.86 16 41 H 0.11 -1.49 6.29 -2.39 -0.02 -1.51 16 42 H 0.16 -1.19 7.61 -2.91 -0.02 -1.21 16 43 H 0.16 -1.43 4.85 -2.91 -0.01 -1.44 16 Total: 0.00 -23.50 385.82 -3.41 -26.92 By element: Atomic # 1 Polarization: -21.08 SS G_CDS: -0.39 Total: -21.47 kcal Atomic # 6 Polarization: 6.87 SS G_CDS: 2.56 Total: 9.43 kcal Atomic # 7 Polarization: 7.42 SS G_CDS: -0.96 Total: 6.46 kcal Atomic # 8 Polarization: -12.48 SS G_CDS: -6.27 Total: -18.75 kcal Atomic # 14 Polarization: -4.12 SS G_CDS: 2.05 Total: -2.07 kcal Atomic # 16 Polarization: 0.15 SS G_CDS: -0.32 Total: -0.17 kcal Atomic # 17 Polarization: -0.25 SS G_CDS: -0.08 Total: -0.33 kcal Total: -23.50 -3.41 -26.92 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_9610468_13421422.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.410 kcal (2) G-P(sol) polarization free energy of solvation -23.501 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.414 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.915 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.326 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds