Wall clock time and date at job start Mon Mar 8 2021 14:43:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86301 * 109.46992 * 2 1 4 4 C 1.50705 * 109.47285 * 240.00275 * 2 1 3 5 5 C 1.33384 * 125.20012 * 300.00077 * 4 2 1 6 6 C 1.38424 * 114.91912 * 179.74894 * 5 4 2 7 7 S 1.76201 * 122.54035 * 180.27045 * 6 5 4 8 8 O 1.42104 * 106.40242 * 23.72878 * 7 6 5 9 9 O 1.42103 * 106.40508 * 156.65202 * 7 6 5 10 10 N 1.65608 * 107.21846 * 270.19281 * 7 6 5 11 11 C 1.46496 * 119.99853 * 64.99774 * 10 7 6 12 12 H 1.09000 * 112.85287 * 15.33676 * 11 10 7 13 13 C 1.53778 * 113.61359 * 146.53353 * 11 10 7 14 14 C 1.53777 * 87.08541 * 89.11114 * 13 11 10 15 15 H 1.08999 * 113.61848 * 270.80551 * 14 13 11 16 16 C 1.50702 * 113.61530 * 139.97942 * 14 13 11 17 17 C 1.38247 * 119.98492 * 299.73415 * 16 14 13 18 18 C 1.38219 * 120.00725 * 179.72527 * 17 16 14 19 19 C 1.38344 * 119.99042 * 0.54497 * 18 17 16 20 20 Cl 1.73596 * 120.01663 * 179.74782 * 19 18 17 21 21 C 1.38359 * 119.97145 * 359.72899 * 19 18 17 22 22 C 1.38210 * 119.98908 * 359.97438 * 21 19 18 23 23 C 1.53782 * 113.61450 * 244.13786 * 11 10 7 24 24 C 1.33386 * 114.92331 * 0.42700 * 6 5 4 25 25 S 1.75886 * 125.20294 * 119.96782 * 4 2 1 26 26 H 0.96701 * 113.99793 * 299.99727 * 1 2 3 27 27 H 1.08997 * 109.47451 * 119.99990 * 2 1 3 28 28 H 1.48496 * 110.00260 * 178.68583 * 3 2 1 29 29 H 1.48508 * 109.99936 * 300.00229 * 3 2 1 30 30 H 1.07997 * 122.54195 * 359.97023 * 5 4 2 31 31 H 0.96997 * 119.99802 * 245.00434 * 10 7 6 32 32 H 1.08997 * 113.61725 * 203.66330 * 13 11 10 33 33 H 1.09008 * 113.61571 * 334.56521 * 13 11 10 34 34 H 1.07998 * 119.99570 * 359.97438 * 17 16 14 35 35 H 1.08004 * 119.99933 * 180.27078 * 18 17 16 36 36 H 1.08003 * 120.00509 * 180.02562 * 21 19 18 37 37 H 1.07996 * 119.99922 * 180.02562 * 22 21 19 38 38 H 1.09007 * 113.61270 * 25.43250 * 23 11 10 39 39 H 1.08997 * 113.61577 * 156.34054 * 23 11 10 40 40 H 1.08002 * 125.20849 * 179.86592 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6738 -1.9811 -1.5437 6 6 2.2399 -2.4156 -2.7299 7 16 2.0233 -4.0548 -3.3388 8 8 0.8226 -4.5437 -2.7567 9 8 2.2378 -3.9933 -4.7422 10 7 3.2523 -4.9748 -2.7178 11 6 3.3372 -5.2050 -1.2735 12 1 2.4141 -4.9558 -0.7501 13 6 3.9023 -6.5861 -0.9020 14 6 5.2962 -5.9374 -0.9344 15 1 5.7692 -5.9676 -1.9160 16 6 6.2075 -6.4094 0.1691 17 6 5.8518 -6.2129 1.4905 18 6 6.6846 -6.6506 2.5030 19 6 7.8796 -7.2755 2.1939 20 17 8.9292 -7.8197 3.4651 21 6 8.2377 -7.4668 0.8712 22 6 7.4013 -7.0342 -0.1404 23 6 4.5946 -4.6009 -0.6262 24 6 2.9643 -1.5004 -3.3754 25 16 2.9462 0.0096 -2.4736 26 1 -0.3933 0.4417 0.7651 27 1 1.7923 -0.5138 0.8899 28 1 3.5345 1.7704 0.0320 29 1 1.5613 2.4679 -1.2085 30 1 1.0667 -2.6213 -0.9210 31 1 3.9160 -5.3612 -3.3103 32 1 3.6029 -6.9284 0.0886 33 1 3.7539 -7.3408 -1.6744 34 1 4.9212 -5.7208 1.7316 35 1 6.4045 -6.5009 3.5353 36 1 9.1703 -7.9549 0.6293 37 1 7.6804 -7.1838 -1.1729 38 1 5.0048 -3.7539 -1.1763 39 1 4.4841 -4.4015 0.4396 40 1 3.4794 -1.6606 -4.3111 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_9610468_15065232.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:43:49 Heat of formation + Delta-G solvation = -18.082163 kcal Electronic energy + Delta-G solvation = -28097.981196 eV Core-core repulsion = 23931.922610 eV Total energy + Delta-G solvation = -4166.058586 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.025 amu Computer time = 1.82 seconds Orbital eigenvalues (eV) -41.42242 -39.54071 -39.40715 -38.24053 -37.62535 -37.38281 -36.88199 -34.35719 -32.17958 -32.03582 -31.35996 -27.29758 -26.90802 -26.17311 -24.89710 -23.99751 -22.78569 -21.30352 -20.72910 -20.14086 -19.21212 -18.66376 -18.53507 -18.20173 -17.79382 -17.13108 -16.74117 -16.46882 -16.39264 -15.95731 -15.56378 -15.50928 -15.05446 -14.74742 -14.52758 -14.50992 -14.32146 -14.25694 -14.13210 -14.05354 -13.78164 -13.62768 -13.15493 -13.06046 -12.95374 -12.91580 -12.68886 -12.64037 -12.60087 -12.23092 -12.08257 -11.89498 -11.78073 -11.75382 -11.39950 -10.73288 -10.62138 -10.19066 -10.11001 -9.90245 -9.56784 -5.39404 -0.80037 -0.52973 0.04634 0.22065 0.27767 0.53790 0.90646 1.07996 1.15732 1.42509 1.74323 1.96186 2.49332 2.68452 3.10228 3.23257 3.32527 3.44669 3.47097 3.61456 3.68271 3.76285 3.78654 3.81979 3.94874 4.02567 4.13706 4.21393 4.24255 4.30523 4.46305 4.54491 4.58103 4.63081 4.74642 4.77915 4.83855 4.84090 4.89235 5.02099 5.12022 5.18141 5.23017 5.47763 5.71497 5.78375 6.42141 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.034 4.034 3 Si 0.670 3.330 4 C -0.182 4.182 5 C -0.039 4.039 6 C -0.685 4.685 7 S 2.712 3.288 8 O -0.945 6.945 9 O -0.954 6.954 10 N -1.096 6.096 11 C 0.123 3.877 12 H 0.110 0.890 13 C -0.132 4.132 14 C -0.075 4.075 15 H 0.101 0.899 16 C -0.066 4.066 17 C -0.105 4.105 18 C -0.107 4.107 19 C -0.039 4.039 20 Cl -0.070 7.070 21 C -0.108 4.108 22 C -0.104 4.104 23 C -0.149 4.149 24 C -0.079 4.079 25 S 0.137 5.863 26 H 0.386 0.614 27 H 0.087 0.913 28 H -0.238 1.238 29 H -0.235 1.235 30 H 0.159 0.841 31 H 0.420 0.580 32 H 0.100 0.900 33 H 0.082 0.918 34 H 0.133 0.867 35 H 0.134 0.866 36 H 0.133 0.867 37 H 0.131 0.869 38 H 0.078 0.922 39 H 0.098 0.902 40 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.906 2.693 4.328 5.442 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.148 4.148 3 Si 0.569 3.431 4 C -0.300 4.300 5 C -0.067 4.067 6 C -0.784 4.784 7 S 2.798 3.202 8 O -0.935 6.935 9 O -0.944 6.944 10 N -0.855 5.855 11 C 0.015 3.985 12 H 0.128 0.872 13 C -0.171 4.171 14 C -0.093 4.093 15 H 0.120 0.880 16 C -0.067 4.067 17 C -0.123 4.123 18 C -0.126 4.126 19 C -0.066 4.066 20 Cl -0.041 7.041 21 C -0.126 4.126 22 C -0.122 4.122 23 C -0.188 4.188 24 C -0.218 4.218 25 S 0.401 5.599 26 H 0.235 0.765 27 H 0.105 0.895 28 H -0.162 1.162 29 H -0.159 1.159 30 H 0.176 0.824 31 H 0.255 0.745 32 H 0.118 0.882 33 H 0.101 0.899 34 H 0.151 0.849 35 H 0.152 0.848 36 H 0.151 0.849 37 H 0.149 0.851 38 H 0.097 0.903 39 H 0.117 0.883 40 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges 2.408 4.204 2.813 5.603 hybrid contribution 0.308 -1.465 0.335 1.534 sum 2.716 2.740 3.149 4.980 Atomic orbital electron populations 1.86529 1.16550 1.81830 1.49903 1.23969 0.86120 1.09618 0.95044 0.94735 0.81863 0.78142 0.88351 1.23689 1.07443 0.97524 1.01302 1.19579 0.97660 0.95173 0.94331 1.30048 1.14169 1.25912 1.08259 1.01605 0.73089 0.72656 0.72854 1.93620 1.42820 1.78175 1.78841 1.93622 1.85536 1.86808 1.28425 1.55362 1.48467 1.66978 1.14654 1.21692 0.99321 0.97813 0.79653 0.87227 1.23402 0.93959 0.96232 1.03477 1.21640 0.93805 0.96543 0.97306 0.88040 1.19802 0.94929 0.97700 0.94234 1.20985 0.99804 0.99891 0.91670 1.21085 0.92860 0.98120 1.00513 1.20997 0.93646 1.02228 0.89682 1.98395 1.65948 1.88582 1.51173 1.21102 1.00611 1.00214 0.90694 1.21048 0.93673 0.98134 0.99321 1.23693 0.96002 0.97006 1.02089 1.25909 0.98265 0.95670 1.01968 1.84507 1.47167 1.13850 1.14421 0.76539 0.89537 1.16212 1.15858 0.82399 0.74454 0.88195 0.89893 0.84912 0.84832 0.84873 0.85093 0.90279 0.88348 0.79626 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.37 12.83 -35.23 -0.45 -0.08 16 2 C -0.03 0.04 2.95 36.01 0.11 0.15 16 3 Si 0.67 -1.34 30.97 -169.99 -5.26 -6.60 16 4 C -0.18 -0.20 5.76 -36.00 -0.21 -0.41 16 5 C -0.04 -0.04 9.56 -41.21 -0.39 -0.44 16 6 C -0.68 -0.55 5.86 -41.21 -0.24 -0.79 16 7 S 2.71 2.77 5.77 -107.50 -0.62 2.15 16 8 O -0.94 -3.91 17.15 -57.17 -0.98 -4.89 16 9 O -0.95 -3.57 17.64 -57.17 -1.01 -4.58 16 10 N -1.10 2.55 5.73 -4.20 -0.02 2.53 16 11 C 0.12 -0.36 4.50 -67.12 -0.30 -0.67 16 12 H 0.11 -0.35 7.76 -51.93 -0.40 -0.75 16 13 C -0.13 0.43 7.33 -25.92 -0.19 0.24 16 14 C -0.07 0.24 3.81 -90.81 -0.35 -0.10 16 15 H 0.10 -0.40 8.08 -51.93 -0.42 -0.82 16 16 C -0.07 0.11 5.29 -104.62 -0.55 -0.44 16 17 C -0.11 0.18 8.62 -39.59 -0.34 -0.16 16 18 C -0.11 0.05 9.83 -39.55 -0.39 -0.34 16 19 C -0.04 -0.02 6.32 -39.50 -0.25 -0.27 16 20 Cl -0.07 -0.08 28.96 -51.86 -1.50 -1.59 16 21 C -0.11 0.02 9.83 -39.55 -0.39 -0.37 16 22 C -0.10 0.12 9.71 -39.59 -0.38 -0.26 16 23 C -0.15 0.53 7.27 -25.77 -0.19 0.34 16 24 C -0.08 -0.02 10.70 29.04 0.31 0.29 16 25 S 0.14 0.12 20.58 -107.50 -2.21 -2.09 16 26 H 0.39 -2.27 8.74 45.56 0.40 -1.87 16 27 H 0.09 -0.31 7.96 -51.93 -0.41 -0.72 16 28 H -0.24 0.01 7.11 56.52 0.40 0.42 16 29 H -0.24 -0.30 7.11 56.52 0.40 0.10 16 30 H 0.16 0.05 7.97 -52.49 -0.42 -0.37 16 31 H 0.42 -1.72 8.81 -34.47 -0.30 -2.03 16 32 H 0.10 -0.36 7.73 -51.93 -0.40 -0.76 16 33 H 0.08 -0.26 8.14 -51.92 -0.42 -0.68 16 34 H 0.13 -0.49 6.64 -52.49 -0.35 -0.84 16 35 H 0.13 -0.22 8.06 -52.48 -0.42 -0.64 16 36 H 0.13 -0.16 8.06 -52.48 -0.42 -0.58 16 37 H 0.13 -0.38 8.05 -52.49 -0.42 -0.80 16 38 H 0.08 -0.26 8.14 -51.92 -0.42 -0.68 16 39 H 0.10 -0.42 6.30 -51.93 -0.33 -0.75 16 40 H 0.19 -0.36 8.00 -52.49 -0.42 -0.78 16 LS Contribution 379.64 15.07 5.72 5.72 Total: 0.00 -10.75 379.64 -14.47 -25.22 By element: Atomic # 1 Polarization: -8.18 SS G_CDS: -4.37 Total: -12.55 kcal Atomic # 6 Polarization: 0.53 SS G_CDS: -3.76 Total: -3.23 kcal Atomic # 7 Polarization: 2.55 SS G_CDS: -0.02 Total: 2.53 kcal Atomic # 8 Polarization: -7.11 SS G_CDS: -2.44 Total: -9.55 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.26 Total: -6.60 kcal Atomic # 16 Polarization: 2.89 SS G_CDS: -2.83 Total: 0.05 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.50 Total: -1.59 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -10.75 -14.47 -25.22 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_9610468_15065232.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.138 kcal (2) G-P(sol) polarization free energy of solvation -10.752 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.614 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.468 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.221 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.082 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.82 seconds