Wall clock time and date at job start Mon Mar 8 2021 11:53:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86297 * 109.47122 * 2 1 4 4 C 1.50698 * 109.47060 * 119.99749 * 2 1 3 5 5 C 1.33393 * 125.20353 * 65.28562 * 4 2 1 6 6 C 1.38422 * 114.91908 * 180.20436 * 5 4 2 7 7 S 1.76209 * 122.53858 * 179.76327 * 6 5 4 8 8 O 1.42092 * 106.40081 * 156.19900 * 7 6 5 9 9 O 1.42100 * 106.39709 * 23.27810 * 7 6 5 10 10 N 1.65603 * 107.21546 * 269.74102 * 7 6 5 11 11 C 1.46500 * 120.00257 * 64.99978 * 10 7 6 12 12 H 1.09003 * 112.84497 * 346.19179 * 11 10 7 13 13 C 1.53778 * 113.69020 * 117.46112 * 11 10 7 14 14 C 1.53788 * 87.07821 * 89.12761 * 13 11 10 15 15 H 1.09000 * 113.69122 * 270.87129 * 14 13 11 16 16 C 1.50700 * 113.61026 * 139.97832 * 14 13 11 17 17 C 1.38230 * 119.96550 * 142.50448 * 16 14 13 18 18 C 1.38237 * 120.04121 * 180.02562 * 17 16 14 19 19 C 1.38407 * 119.98412 * 359.97438 * 18 17 16 20 20 F 1.35103 * 120.03026 * 180.02562 * 19 18 17 21 21 C 1.38570 * 119.94379 * 0.02562 * 19 18 17 22 22 Br 1.89100 * 120.02182 * 179.97438 * 21 19 18 23 23 C 1.38254 * 119.95349 * 0.24693 * 21 19 18 24 24 C 1.53778 * 113.61433 * 214.99929 * 11 10 7 25 25 C 1.33387 * 114.92364 * 359.49962 * 6 5 4 26 26 S 1.75878 * 109.59210 * 0.26365 * 25 6 5 27 27 H 0.96697 * 114.00343 * 60.00118 * 1 2 3 28 28 H 1.08998 * 109.46964 * 239.99607 * 2 1 3 29 29 H 1.48499 * 109.99816 * 298.68094 * 3 2 1 30 30 H 1.48497 * 110.00218 * 59.99949 * 3 2 1 31 31 H 1.08004 * 122.54055 * 359.97438 * 5 4 2 32 32 H 0.97002 * 119.99456 * 245.00154 * 10 7 6 33 33 H 1.08998 * 113.61896 * 334.58024 * 13 11 10 34 34 H 1.08999 * 113.61241 * 203.67438 * 13 11 10 35 35 H 1.07993 * 119.97755 * 359.97438 * 17 16 14 36 36 H 1.08000 * 120.00754 * 179.97438 * 18 17 16 37 37 H 1.07997 * 119.99212 * 179.74586 * 23 21 19 38 38 H 1.08999 * 113.61269 * 156.24920 * 24 11 10 39 39 H 1.09006 * 113.69069 * 25.35643 * 24 11 10 40 40 H 1.08004 * 125.20546 * 180.29329 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.7579 -2.0063 1.4949 6 6 2.3055 -2.4357 2.6915 7 16 2.1893 -4.1056 3.2418 8 8 3.2719 -4.3085 4.1395 9 8 1.9842 -4.8975 2.0798 10 7 0.8052 -4.2297 4.1425 11 6 -0.5012 -4.0360 3.5085 12 1 -0.4285 -3.5868 2.5180 13 6 -1.4015 -5.2818 3.5555 14 6 -1.9200 -4.7595 4.9058 15 1 -1.3373 -5.1021 5.7609 16 6 -3.4033 -4.9460 5.0958 17 6 -3.9032 -5.2815 6.3401 18 6 -5.2635 -5.4535 6.5161 19 6 -6.1256 -5.2892 5.4458 20 9 -7.4553 -5.4566 5.6168 21 6 -5.6238 -4.9529 4.1987 22 35 -6.7996 -4.7285 2.7348 23 6 -4.2624 -4.7869 4.0243 24 6 -1.5333 -3.3524 4.4207 25 6 2.9325 -1.4908 3.3939 26 16 2.8424 0.0408 2.5340 27 1 -0.3934 0.4417 -0.7650 28 1 1.7923 -0.5139 -0.8899 29 1 1.5878 2.4585 -1.2242 30 1 1.5615 2.4679 1.2084 31 1 1.2272 -2.6694 0.8277 32 1 0.8596 -4.4305 5.0900 33 1 -0.8482 -6.2178 3.6328 34 1 -2.1611 -5.3013 2.7741 35 1 -3.2305 -5.4102 7.1751 36 1 -5.6534 -5.7161 7.4884 37 1 -3.8703 -4.5288 3.0517 38 1 -2.3289 -2.8443 3.8758 39 1 -1.0877 -2.7301 5.1969 40 1 3.4213 -1.6431 4.3449 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_9650944_15065232.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:53:11 Heat of formation + Delta-G solvation = -48.643571 kcal Electronic energy + Delta-G solvation = -30323.064930 eV Core-core repulsion = 25706.208916 eV Total energy + Delta-G solvation = -4616.856014 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 447.965 amu Computer time = 2.51 seconds Orbital eigenvalues (eV) -49.98726 -41.46223 -39.49362 -39.32215 -38.21983 -37.75138 -36.87185 -34.45423 -33.53900 -32.03915 -31.43283 -30.40486 -27.28793 -26.88385 -26.20997 -24.91062 -24.18228 -22.82216 -21.31462 -20.77436 -20.14426 -19.18451 -18.91734 -18.71999 -18.51917 -17.76437 -17.70842 -17.11552 -16.85304 -16.77182 -16.35551 -16.12301 -15.69756 -15.63512 -15.18704 -14.78182 -14.65285 -14.48936 -14.31442 -14.29807 -14.18885 -14.12422 -14.00834 -13.78323 -13.49246 -13.16738 -13.12358 -13.02945 -12.91235 -12.69225 -12.48851 -12.47254 -12.27688 -12.05297 -11.73781 -11.61337 -11.47299 -11.32065 -10.75761 -10.67081 -10.24092 -10.07955 -9.87199 -9.63879 -5.22360 -0.79026 -0.49510 -0.22995 -0.07962 0.25024 0.45438 0.54186 0.95804 1.06526 1.40026 1.73698 1.96692 2.21266 2.68781 2.99313 3.04705 3.20702 3.30324 3.38338 3.46387 3.50967 3.60156 3.71734 3.79990 3.86678 3.91389 3.93788 4.05712 4.13948 4.25477 4.30908 4.49323 4.55485 4.58974 4.70191 4.72845 4.76160 4.79936 4.86131 4.90486 4.92448 5.03085 5.18640 5.30852 5.54470 5.78611 6.20792 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.036 4.036 3 Si 0.646 3.354 4 C -0.181 4.181 5 C -0.047 4.047 6 C -0.687 4.687 7 S 2.711 3.289 8 O -0.954 6.954 9 O -0.945 6.945 10 N -1.096 6.096 11 C 0.128 3.872 12 H 0.106 0.894 13 C -0.145 4.145 14 C -0.073 4.073 15 H 0.106 0.894 16 C -0.076 4.076 17 C -0.071 4.071 18 C -0.144 4.144 19 C 0.122 3.878 20 F -0.124 7.124 21 C -0.128 4.128 22 Br -0.027 7.027 23 C -0.062 4.062 24 C -0.137 4.137 25 C -0.085 4.085 26 S 0.168 5.832 27 H 0.384 0.616 28 H 0.090 0.910 29 H -0.236 1.236 30 H -0.235 1.235 31 H 0.156 0.844 32 H 0.420 0.580 33 H 0.085 0.915 34 H 0.099 0.901 35 H 0.140 0.860 36 H 0.146 0.854 37 H 0.144 0.856 38 H 0.098 0.902 39 H 0.082 0.918 40 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.414 3.588 0.716 4.383 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.148 4.148 3 Si 0.545 3.455 4 C -0.298 4.298 5 C -0.076 4.076 6 C -0.786 4.786 7 S 2.797 3.203 8 O -0.944 6.944 9 O -0.935 6.935 10 N -0.855 5.855 11 C 0.020 3.980 12 H 0.124 0.876 13 C -0.184 4.184 14 C -0.092 4.092 15 H 0.124 0.876 16 C -0.077 4.077 17 C -0.089 4.089 18 C -0.164 4.164 19 C 0.101 3.899 20 F -0.102 7.102 21 C -0.209 4.209 22 Br 0.059 6.941 23 C -0.081 4.081 24 C -0.176 4.176 25 C -0.224 4.224 26 S 0.432 5.568 27 H 0.233 0.767 28 H 0.108 0.892 29 H -0.159 1.159 30 H -0.158 1.158 31 H 0.174 0.826 32 H 0.255 0.745 33 H 0.103 0.897 34 H 0.117 0.883 35 H 0.158 0.842 36 H 0.164 0.836 37 H 0.162 0.838 38 H 0.117 0.883 39 H 0.101 0.899 40 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges 2.904 5.092 0.598 5.893 hybrid contribution -1.855 -0.946 -0.029 2.082 sum 1.050 4.147 0.569 4.315 Atomic orbital electron populations 1.86580 1.17178 1.80148 1.50078 1.24016 0.84684 1.10119 0.95948 0.95210 0.91864 0.75140 0.83325 1.23769 1.07969 0.97182 1.00884 1.19596 0.98188 0.95008 0.94767 1.29989 1.15809 1.26389 1.06446 1.01613 0.72120 0.73154 0.73400 1.93620 1.50964 1.85013 1.64824 1.93620 1.85150 1.65264 1.49445 1.55379 1.19817 1.87173 1.23114 1.21617 0.82125 0.97490 0.96807 0.87574 1.23605 0.99144 0.98942 0.96710 1.21608 0.90794 0.97654 0.99122 0.87608 1.19768 0.95474 0.99591 0.92840 1.21098 0.94354 0.96191 0.97278 1.21203 0.93494 1.03079 0.98576 1.17435 0.78354 1.00926 0.93184 1.91579 1.30234 1.92549 1.95857 1.21978 0.95619 1.10571 0.92718 1.96830 1.61545 1.96273 1.39462 1.20900 0.89842 0.97293 1.00090 1.23479 0.98592 0.95787 0.99711 1.25903 0.98171 0.95613 1.02676 1.84419 1.49836 1.10187 1.12326 0.76686 0.89240 1.15931 1.15837 0.82644 0.74480 0.89651 0.88318 0.84193 0.83639 0.83830 0.88348 0.89943 0.79620 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 35. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.33 12.86 -35.23 -0.45 -0.13 16 2 C -0.04 0.05 2.95 36.00 0.11 0.15 16 3 Si 0.65 -1.18 30.98 -169.99 -5.27 -6.44 16 4 C -0.18 0.00 5.73 -36.00 -0.21 -0.21 16 5 C -0.05 -0.02 9.53 -41.21 -0.39 -0.41 16 6 C -0.69 0.05 5.86 -41.21 -0.24 -0.19 16 7 S 2.71 0.99 5.74 -107.50 -0.62 0.37 16 8 O -0.95 -2.79 17.64 -57.17 -1.01 -3.80 16 9 O -0.94 -3.21 17.39 -57.17 -0.99 -4.20 16 10 N -1.10 2.89 5.73 -4.20 -0.02 2.86 16 11 C 0.13 -0.36 4.43 -67.12 -0.30 -0.66 16 12 H 0.11 -0.31 7.98 -51.93 -0.41 -0.73 16 13 C -0.14 0.40 7.25 -25.92 -0.19 0.21 16 14 C -0.07 0.25 3.81 -90.96 -0.35 -0.09 16 15 H 0.11 -0.49 8.07 -51.93 -0.42 -0.91 16 16 C -0.08 0.14 5.29 -104.62 -0.55 -0.41 16 17 C -0.07 0.14 9.71 -39.58 -0.38 -0.24 16 18 C -0.14 0.10 10.03 -39.52 -0.40 -0.30 16 19 C 0.12 0.18 7.27 -39.40 -0.29 -0.11 16 20 F -0.12 -0.38 16.73 2.25 0.04 -0.34 16 21 C -0.13 -0.14 6.23 -39.45 -0.25 -0.39 16 22 Br -0.03 -0.05 33.29 -68.01 -2.26 -2.31 16 23 C -0.06 0.05 8.36 -39.57 -0.33 -0.28 16 24 C -0.14 0.49 7.33 -25.92 -0.19 0.30 16 25 C -0.08 0.08 10.70 29.04 0.31 0.39 16 26 S 0.17 -0.16 20.59 -107.50 -2.21 -2.38 16 27 H 0.38 -1.73 8.74 45.56 0.40 -1.33 16 28 H 0.09 -0.27 7.96 -51.93 -0.41 -0.68 16 29 H -0.24 0.08 7.11 56.52 0.40 0.48 16 30 H -0.23 -0.21 7.11 56.52 0.40 0.19 16 31 H 0.16 -0.04 7.96 -52.48 -0.42 -0.46 16 32 H 0.42 -1.92 8.80 -34.47 -0.30 -2.23 16 33 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 34 H 0.10 -0.31 6.29 -51.93 -0.33 -0.64 16 35 H 0.14 -0.60 8.05 -52.49 -0.42 -1.03 16 36 H 0.15 -0.34 8.06 -52.49 -0.42 -0.76 16 37 H 0.14 -0.32 6.64 -52.49 -0.35 -0.67 16 38 H 0.10 -0.34 7.73 -51.93 -0.40 -0.74 16 39 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 40 H 0.19 -0.58 8.00 -52.48 -0.42 -1.00 16 LS Contribution 390.21 15.07 5.88 5.88 Total: 0.00 -10.05 390.21 -14.52 -24.57 By element: Atomic # 1 Polarization: -7.91 SS G_CDS: -3.95 Total: -11.86 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -3.64 Total: -2.23 kcal Atomic # 7 Polarization: 2.89 SS G_CDS: -0.02 Total: 2.86 kcal Atomic # 8 Polarization: -5.67 SS G_CDS: -2.46 Total: -8.13 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.04 Total: -0.34 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.27 Total: -6.44 kcal Atomic # 16 Polarization: 0.82 SS G_CDS: -2.83 Total: -2.01 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.26 Total: -2.31 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -10.05 -14.52 -24.57 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_9650944_15065232.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.074 kcal (2) G-P(sol) polarization free energy of solvation -10.050 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.125 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.519 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.569 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.644 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.51 seconds