Wall clock time and date at job start Mon Mar 8 2021 12:34:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86299 * 109.47081 * 2 1 4 4 C 1.50697 * 109.47593 * 120.00394 * 2 1 3 5 5 C 1.33386 * 125.20435 * 64.99535 * 4 2 1 6 6 C 1.38423 * 114.92254 * 180.02562 * 5 4 2 7 7 S 1.76195 * 122.54029 * 179.97438 * 6 5 4 8 8 O 1.42106 * 106.40243 * 336.45875 * 7 6 5 9 9 O 1.42101 * 106.40096 * 203.54139 * 7 6 5 10 10 N 1.65601 * 107.22113 * 89.99957 * 7 6 5 11 11 C 1.46492 * 119.99965 * 64.99998 * 10 7 6 12 12 H 1.09001 * 112.85185 * 13.80371 * 11 10 7 13 13 C 1.53786 * 113.61441 * 145.00156 * 11 10 7 14 14 C 1.53780 * 87.08158 * 89.11534 * 13 11 10 15 15 H 1.09001 * 113.61597 * 270.80387 * 14 13 11 16 16 C 1.50698 * 113.61510 * 139.97779 * 14 13 11 17 17 C 1.38219 * 119.99472 * 301.78623 * 16 14 13 18 18 C 1.38267 * 120.02187 * 180.29544 * 17 16 14 19 19 C 1.38188 * 120.01566 * 359.70318 * 18 17 16 20 20 C 1.38376 * 119.98792 * 0.02562 * 19 18 17 21 21 Cl 1.73601 * 120.01368 * 179.97438 * 20 19 18 22 22 C 1.38234 * 119.98955 * 121.52607 * 16 14 13 23 23 C 1.53784 * 87.17286 * 25.39183 * 14 13 11 24 24 C 1.33391 * 114.91756 * 0.25115 * 6 5 4 25 25 S 1.75881 * 109.59501 * 359.63186 * 24 6 5 26 26 H 0.96698 * 113.99883 * 59.99799 * 1 2 3 27 27 H 1.09002 * 109.46944 * 240.00280 * 2 1 3 28 28 H 1.48503 * 109.99911 * 60.00252 * 3 2 1 29 29 H 1.48501 * 110.00135 * 181.32184 * 3 2 1 30 30 H 1.07999 * 122.53837 * 0.02562 * 5 4 2 31 31 H 0.97000 * 119.99413 * 244.99849 * 10 7 6 32 32 H 1.08996 * 113.61556 * 334.56370 * 13 11 10 33 33 H 1.09004 * 113.60948 * 203.66355 * 13 11 10 34 34 H 1.07993 * 119.99135 * 359.97438 * 17 16 14 35 35 H 1.08002 * 119.99096 * 179.72514 * 18 17 16 36 36 H 1.08002 * 120.00842 * 180.02562 * 19 18 17 37 37 H 1.08002 * 120.01083 * 0.02562 * 22 16 14 38 38 H 1.08996 * 113.61700 * 89.15624 * 23 14 13 39 39 H 1.09002 * 113.61635 * 220.06205 * 23 14 13 40 40 H 1.08003 * 125.19527 * 179.75838 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7105 1.2303 5 6 1.7535 -2.0052 1.4972 6 6 2.3056 -2.4358 2.6913 7 16 2.1893 -4.1056 3.2415 8 8 1.0536 -4.6632 2.5944 9 8 2.3414 -4.0742 4.6540 10 7 3.5085 -4.9108 2.6469 11 6 4.8539 -4.5449 3.0963 12 1 4.8461 -3.9097 3.9821 13 6 5.8139 -5.7414 3.2047 14 6 6.1773 -5.4825 1.7331 15 1 5.5389 -6.0122 1.0259 16 6 7.6451 -5.6496 1.4353 17 6 8.5788 -4.8894 2.1141 18 6 9.9252 -5.0379 1.8370 19 6 10.3386 -5.9509 0.8856 20 6 9.4047 -6.7162 0.2097 21 17 9.9232 -7.8628 -0.9862 22 6 8.0577 -6.5670 0.4871 23 6 5.7585 -4.0212 1.9660 24 6 2.9274 -1.4896 3.3966 25 16 2.8416 0.0409 2.5344 26 1 -0.3933 0.4417 -0.7650 27 1 1.7924 -0.5138 -0.8900 28 1 1.5615 2.4679 1.2086 29 1 3.5346 1.7703 -0.0322 30 1 1.2192 -2.6673 0.8321 31 1 3.3903 -5.6248 2.0010 32 1 5.3086 -6.6932 3.3688 33 1 6.6416 -5.5760 3.8945 34 1 8.2562 -4.1755 2.8574 35 1 10.6541 -4.4405 2.3645 36 1 11.3904 -6.0670 0.6695 37 1 7.3283 -7.1637 -0.0405 38 1 6.5710 -3.3848 2.3165 39 1 5.2086 -3.5863 1.1315 40 1 3.4114 -1.6409 4.3502 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_9705210_15065232.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:34:51 Heat of formation + Delta-G solvation = -18.241481 kcal Electronic energy + Delta-G solvation = -28015.507466 eV Core-core repulsion = 23849.441971 eV Total energy + Delta-G solvation = -4166.065494 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.025 amu Computer time = 1.81 seconds Orbital eigenvalues (eV) -41.44103 -39.52500 -39.42330 -38.24124 -37.62231 -37.39664 -36.88835 -34.42873 -32.06925 -32.04432 -31.38573 -27.27980 -26.91780 -26.31445 -24.89090 -23.84390 -22.89912 -21.32474 -20.74430 -20.18247 -19.08162 -18.69933 -18.55535 -18.10740 -17.80564 -17.21448 -16.72025 -16.50342 -16.30858 -15.92982 -15.66230 -15.55513 -15.13243 -14.83253 -14.61810 -14.51106 -14.29918 -14.23935 -14.15163 -14.06286 -13.68116 -13.51413 -13.16144 -13.06900 -12.92460 -12.79944 -12.70069 -12.63191 -12.59544 -12.24987 -12.23265 -11.95154 -11.81057 -11.78787 -11.40566 -10.71851 -10.59496 -10.22492 -9.95294 -9.90748 -9.68914 -5.38850 -0.80592 -0.53822 0.07383 0.17971 0.28325 0.53921 0.92290 1.06534 1.13461 1.42848 1.73719 1.94140 2.49287 2.67588 3.11225 3.22103 3.32425 3.43080 3.43416 3.61289 3.69180 3.76358 3.76880 3.89014 3.94483 3.98078 4.13761 4.15240 4.24246 4.31204 4.44839 4.52470 4.54550 4.59602 4.74171 4.79110 4.82833 4.84455 4.84500 5.02010 5.15075 5.18823 5.25900 5.43930 5.71133 5.77799 6.43112 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.036 4.036 3 Si 0.671 3.329 4 C -0.182 4.182 5 C -0.038 4.038 6 C -0.684 4.684 7 S 2.711 3.289 8 O -0.948 6.948 9 O -0.950 6.950 10 N -1.096 6.096 11 C 0.123 3.877 12 H 0.108 0.892 13 C -0.132 4.132 14 C -0.073 4.073 15 H 0.102 0.898 16 C -0.058 4.058 17 C -0.114 4.114 18 C -0.103 4.103 19 C -0.115 4.115 20 C -0.032 4.032 21 Cl -0.069 7.069 22 C -0.107 4.107 23 C -0.149 4.149 24 C -0.083 4.083 25 S 0.140 5.860 26 H 0.386 0.614 27 H 0.087 0.913 28 H -0.234 1.234 29 H -0.239 1.239 30 H 0.158 0.842 31 H 0.421 0.579 32 H 0.083 0.917 33 H 0.100 0.900 34 H 0.130 0.870 35 H 0.133 0.867 36 H 0.133 0.867 37 H 0.132 0.868 38 H 0.098 0.902 39 H 0.080 0.920 40 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.194 4.030 -3.273 6.096 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.149 4.149 3 Si 0.570 3.430 4 C -0.300 4.300 5 C -0.066 4.066 6 C -0.783 4.783 7 S 2.798 3.202 8 O -0.938 6.938 9 O -0.940 6.940 10 N -0.854 5.854 11 C 0.014 3.986 12 H 0.126 0.874 13 C -0.171 4.171 14 C -0.092 4.092 15 H 0.120 0.880 16 C -0.059 4.059 17 C -0.132 4.132 18 C -0.122 4.122 19 C -0.134 4.134 20 C -0.058 4.058 21 Cl -0.040 7.040 22 C -0.126 4.126 23 C -0.188 4.188 24 C -0.221 4.221 25 S 0.403 5.597 26 H 0.234 0.766 27 H 0.104 0.896 28 H -0.158 1.158 29 H -0.163 1.163 30 H 0.176 0.824 31 H 0.257 0.743 32 H 0.102 0.898 33 H 0.118 0.882 34 H 0.147 0.853 35 H 0.151 0.849 36 H 0.151 0.849 37 H 0.150 0.850 38 H 0.116 0.884 39 H 0.099 0.901 40 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges 3.693 5.517 -1.476 6.801 hybrid contribution -0.091 -1.706 -1.022 1.991 sum 3.602 3.811 -2.498 5.809 Atomic orbital electron populations 1.86533 1.16580 1.81844 1.49884 1.23992 0.86112 1.09729 0.95053 0.94701 0.81817 0.78063 0.88395 1.23688 1.08430 0.97038 1.00812 1.19586 0.97229 0.95102 0.94711 1.30040 1.15453 1.25889 1.06915 1.01615 0.72241 0.72684 0.73708 1.93626 1.46924 1.76639 1.76619 1.93617 1.85798 1.86503 1.28064 1.55360 1.19549 1.49769 1.60752 1.21723 0.81263 0.98244 0.97324 0.87391 1.23417 0.98950 0.98972 0.95768 1.21579 0.91883 0.97847 0.97873 0.87976 1.19637 0.95189 0.95530 0.95524 1.21117 0.92711 0.99532 0.99831 1.21145 0.96132 0.97735 0.97143 1.21118 0.99645 0.96068 0.96531 1.20980 0.94297 0.95461 0.95084 1.98397 1.90971 1.59032 1.55578 1.20980 0.93963 0.99104 0.98560 1.23679 0.99676 0.95991 0.99443 1.25924 0.98567 0.95578 1.02077 1.84483 1.50952 1.11707 1.12552 0.76563 0.89567 1.15780 1.16279 0.82405 0.74328 0.89819 0.88189 0.85254 0.84925 0.84904 0.84961 0.88377 0.90111 0.79636 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.15 12.86 -35.23 -0.45 -0.30 16 2 C -0.04 0.03 2.95 36.00 0.11 0.14 16 3 Si 0.67 -1.27 30.98 -169.99 -5.27 -6.53 16 4 C -0.18 -0.25 5.73 -36.01 -0.21 -0.46 16 5 C -0.04 -0.06 9.59 -41.21 -0.40 -0.45 16 6 C -0.68 -0.61 5.86 -41.21 -0.24 -0.85 16 7 S 2.71 3.07 5.77 -107.50 -0.62 2.45 16 8 O -0.95 -4.11 17.63 -57.17 -1.01 -5.11 16 9 O -0.95 -3.54 17.16 -57.17 -0.98 -4.52 16 10 N -1.10 2.39 5.73 -4.12 -0.02 2.36 16 11 C 0.12 -0.37 4.51 -67.03 -0.30 -0.67 16 12 H 0.11 -0.39 7.77 -51.93 -0.40 -0.80 16 13 C -0.13 0.42 7.33 -25.92 -0.19 0.23 16 14 C -0.07 0.22 3.80 -90.96 -0.35 -0.13 16 15 H 0.10 -0.36 8.05 -51.93 -0.42 -0.78 16 16 C -0.06 0.08 5.29 -104.63 -0.55 -0.47 16 17 C -0.11 0.21 8.53 -39.58 -0.34 -0.13 16 18 C -0.10 0.14 10.05 -39.59 -0.40 -0.26 16 19 C -0.11 0.02 9.83 -39.55 -0.39 -0.37 16 20 C -0.03 -0.02 6.32 -39.50 -0.25 -0.27 16 21 Cl -0.07 -0.09 28.96 -51.86 -1.50 -1.59 16 22 C -0.11 0.02 9.49 -39.55 -0.38 -0.35 16 23 C -0.15 0.52 7.27 -25.82 -0.19 0.34 16 24 C -0.08 0.00 10.70 29.04 0.31 0.31 16 25 S 0.14 0.11 20.60 -107.50 -2.21 -2.10 16 26 H 0.39 -2.13 8.74 45.56 0.40 -1.73 16 27 H 0.09 -0.25 7.96 -51.93 -0.41 -0.67 16 28 H -0.23 -0.28 7.11 56.52 0.40 0.13 16 29 H -0.24 -0.01 7.11 56.52 0.40 0.40 16 30 H 0.16 0.15 7.96 -52.49 -0.42 -0.27 16 31 H 0.42 -1.59 8.79 -34.46 -0.30 -1.89 16 32 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 33 H 0.10 -0.37 7.62 -51.93 -0.40 -0.76 16 34 H 0.13 -0.49 6.73 -52.49 -0.35 -0.84 16 35 H 0.13 -0.43 8.06 -52.49 -0.42 -0.85 16 36 H 0.13 -0.16 8.06 -52.49 -0.42 -0.59 16 37 H 0.13 -0.16 8.05 -52.49 -0.42 -0.58 16 38 H 0.10 -0.42 6.41 -51.93 -0.33 -0.75 16 39 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 40 H 0.19 -0.45 8.00 -52.48 -0.42 -0.87 16 LS Contribution 379.62 15.07 5.72 5.72 Total: 0.00 -10.78 379.62 -14.47 -25.25 By element: Atomic # 1 Polarization: -7.85 SS G_CDS: -4.37 Total: -12.22 kcal Atomic # 6 Polarization: 0.35 SS G_CDS: -3.75 Total: -3.41 kcal Atomic # 7 Polarization: 2.39 SS G_CDS: -0.02 Total: 2.36 kcal Atomic # 8 Polarization: -7.49 SS G_CDS: -2.44 Total: -9.93 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.27 Total: -6.53 kcal Atomic # 16 Polarization: 3.18 SS G_CDS: -2.83 Total: 0.35 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.50 Total: -1.59 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -10.78 -14.47 -25.25 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_9705210_15065232.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.010 kcal (2) G-P(sol) polarization free energy of solvation -10.781 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.771 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.471 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.252 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.241 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.81 seconds