Wall clock time and date at job start Mon Mar 8 2021 12:35:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86304 * 109.46925 * 2 1 4 4 C 1.50696 * 109.47357 * 120.00047 * 2 1 3 5 5 C 1.38233 * 119.99943 * 65.00529 * 4 2 1 6 6 C 1.38245 * 119.99999 * 179.97438 * 5 4 2 7 7 C 1.38232 * 119.99705 * 359.97438 * 6 5 4 8 8 S 1.76197 * 119.99602 * 180.02562 * 7 6 5 9 9 O 1.42096 * 106.40415 * 336.45308 * 8 7 6 10 10 O 1.42099 * 106.40168 * 203.53621 * 8 7 6 11 11 N 1.65603 * 107.22185 * 89.99652 * 8 7 6 12 12 C 1.46499 * 120.00100 * 64.99348 * 11 8 7 13 13 H 1.08998 * 112.84958 * 13.81402 * 12 11 8 14 14 C 1.53781 * 113.61193 * 145.00041 * 12 11 8 15 15 C 1.53786 * 87.08013 * 89.11993 * 14 12 11 16 16 H 1.08997 * 113.61316 * 270.80087 * 15 14 12 17 17 C 1.50696 * 113.61613 * 139.97728 * 15 14 12 18 18 C 1.38209 * 119.97593 * 120.00089 * 17 15 14 19 19 C 1.38467 * 120.02791 * 180.02562 * 18 17 15 20 20 F 1.35095 * 120.01269 * 180.02562 * 19 18 17 21 21 C 1.38423 * 119.97552 * 359.97438 * 19 18 17 22 22 C 1.38420 * 119.94665 * 0.28146 * 21 19 18 23 23 F 1.35104 * 120.01003 * 179.69514 * 22 21 19 24 24 C 1.38212 * 119.97804 * 299.98141 * 17 15 14 25 25 C 1.53778 * 113.61691 * 242.49977 * 12 11 8 26 26 C 1.38230 * 120.00410 * 0.26689 * 7 6 5 27 27 C 1.38240 * 119.99918 * 359.52135 * 26 7 6 28 28 H 0.96698 * 114.00482 * 60.00169 * 1 2 3 29 29 H 1.09000 * 109.47123 * 240.00262 * 2 1 3 30 30 H 1.48496 * 110.00022 * 298.68330 * 3 2 1 31 31 H 1.48503 * 109.99957 * 60.00264 * 3 2 1 32 32 H 1.07994 * 120.00373 * 359.97438 * 5 4 2 33 33 H 1.07998 * 119.99560 * 179.97438 * 6 5 4 34 34 H 0.97001 * 119.99492 * 245.00223 * 11 8 7 35 35 H 1.09003 * 113.61584 * 334.57197 * 14 12 11 36 36 H 1.09001 * 113.69221 * 203.67397 * 14 12 11 37 37 H 1.08001 * 119.98433 * 0.02586 * 18 17 15 38 38 H 1.08002 * 120.02325 * 179.97438 * 21 19 18 39 39 H 1.08000 * 119.98097 * 359.97438 * 24 17 15 40 40 H 1.09001 * 113.61469 * 156.33657 * 25 12 11 41 41 H 1.08995 * 113.61153 * 25.43801 * 25 12 11 42 42 H 1.08003 * 120.00139 * 179.72742 * 26 7 6 43 43 H 1.07995 * 120.00114 * 180.26595 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6848 -2.0602 1.3982 6 6 2.1462 -2.7120 2.5267 7 6 2.8544 -2.0140 3.4870 8 16 3.4429 -2.8450 4.9249 9 8 2.6136 -3.9859 5.0968 10 8 3.6104 -1.8484 5.9239 11 7 4.9576 -3.4161 4.5757 12 6 6.0506 -2.4780 4.3085 13 1 5.8113 -1.4552 4.5996 14 6 7.4168 -2.9612 4.8234 15 6 7.6004 -3.6465 3.4590 16 1 7.2121 -4.6645 3.4260 17 6 9.0000 -3.5360 2.9114 18 6 9.7332 -4.6790 2.6543 19 6 11.0195 -4.5786 2.1516 20 9 11.7357 -5.6961 1.8999 21 6 11.5709 -3.3329 1.9062 22 6 10.8376 -2.1887 2.1691 23 9 11.3768 -0.9721 1.9358 24 6 9.5494 -2.2916 2.6664 25 6 6.6315 -2.5969 2.8896 26 6 3.0966 -0.6632 3.3216 27 6 2.6391 -0.0123 2.1911 28 1 -0.3934 0.4417 -0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 1.5877 2.4586 -1.2242 31 1 1.5614 2.4679 1.2085 32 1 1.1319 -2.6055 0.6478 33 1 1.9532 -3.7664 2.6580 34 1 5.1210 -4.3719 4.5480 35 1 7.3469 -3.6599 5.6572 36 1 8.1265 -2.1542 5.0057 37 1 9.3027 -5.6508 2.8455 38 1 12.5743 -3.2537 1.5145 39 1 8.9753 -1.3992 2.8670 40 1 7.1256 -1.6893 2.5426 41 1 5.9277 -3.0014 2.1623 42 1 3.6461 -0.1170 4.0740 43 1 2.8320 1.0421 2.0598 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_9705378_13421422.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:35:59 Heat of formation + Delta-G solvation = -106.559097 kcal Electronic energy + Delta-G solvation = -32169.037031 eV Core-core repulsion = 27330.881393 eV Total energy + Delta-G solvation = -4838.155639 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.088 amu Computer time = 3.24 seconds Orbital eigenvalues (eV) -50.04692 -50.02636 -41.43540 -40.69497 -39.16359 -38.25532 -37.92674 -36.89508 -34.44576 -33.23235 -32.27071 -31.82656 -31.36875 -27.34846 -26.93049 -26.59447 -24.17555 -24.01656 -23.20825 -22.89396 -21.05246 -20.55121 -19.46088 -18.85137 -18.75849 -18.42558 -18.16086 -17.55213 -17.36529 -17.10519 -17.03138 -16.88569 -16.72616 -16.33114 -16.01670 -15.93486 -15.88578 -15.43120 -15.36302 -15.18438 -14.73067 -14.53103 -14.34948 -14.10046 -14.00437 -13.89923 -13.73416 -13.56005 -13.16123 -13.10833 -13.06958 -13.05795 -12.88375 -12.77999 -12.49607 -12.18217 -12.04766 -11.92589 -11.82311 -11.52063 -10.77029 -10.70953 -10.41487 -10.19226 -9.99417 -9.86684 -5.14602 -0.76602 -0.39497 -0.17484 -0.14777 0.14039 1.05951 1.43423 1.77726 1.80471 2.17383 2.25386 2.68404 2.72764 3.07660 3.09587 3.20684 3.24938 3.38011 3.39213 3.55017 3.62293 3.64338 3.67649 3.71886 3.78842 3.85799 3.95809 3.98256 4.06375 4.14244 4.29917 4.41427 4.49358 4.51671 4.57576 4.59935 4.70276 4.74748 4.75563 4.80045 4.87671 4.88223 4.88610 4.92341 5.10760 5.20224 5.25908 5.62624 5.64257 5.76463 6.22075 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.086 4.086 3 Si 0.685 3.315 4 C -0.015 4.015 5 C -0.113 4.113 6 C -0.016 4.016 7 C -0.674 4.674 8 S 2.696 3.304 9 O -0.954 6.954 10 O -0.950 6.950 11 N -1.097 6.097 12 C 0.123 3.877 13 H 0.111 0.889 14 C -0.132 4.132 15 C -0.077 4.077 16 H 0.107 0.893 17 C -0.012 4.012 18 C -0.161 4.161 19 C 0.135 3.865 20 F -0.130 7.130 21 C -0.198 4.198 22 C 0.136 3.864 23 F -0.129 7.129 24 C -0.164 4.164 25 C -0.148 4.148 26 C -0.014 4.014 27 C -0.136 4.136 28 H 0.384 0.616 29 H 0.083 0.917 30 H -0.258 1.258 31 H -0.252 1.252 32 H 0.135 0.865 33 H 0.143 0.857 34 H 0.420 0.580 35 H 0.085 0.915 36 H 0.101 0.899 37 H 0.143 0.857 38 H 0.149 0.851 39 H 0.145 0.855 40 H 0.101 0.899 41 H 0.083 0.917 42 H 0.146 0.854 43 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.601 0.902 -4.247 5.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.196 4.196 3 Si 0.585 3.415 4 C -0.016 4.016 5 C -0.132 4.132 6 C -0.035 4.035 7 C -0.761 4.761 8 S 2.785 3.215 9 O -0.944 6.944 10 O -0.940 6.940 11 N -0.856 5.856 12 C 0.015 3.985 13 H 0.129 0.871 14 C -0.172 4.172 15 C -0.095 4.095 16 H 0.125 0.875 17 C -0.012 4.012 18 C -0.180 4.180 19 C 0.116 3.884 20 F -0.108 7.108 21 C -0.218 4.218 22 C 0.117 3.883 23 F -0.107 7.107 24 C -0.183 4.183 25 C -0.187 4.187 26 C -0.034 4.034 27 C -0.154 4.154 28 H 0.232 0.768 29 H 0.101 0.899 30 H -0.183 1.183 31 H -0.176 1.176 32 H 0.153 0.847 33 H 0.161 0.839 34 H 0.256 0.744 35 H 0.103 0.897 36 H 0.120 0.880 37 H 0.161 0.839 38 H 0.166 0.834 39 H 0.163 0.837 40 H 0.119 0.881 41 H 0.102 0.898 42 H 0.163 0.837 43 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 2.035 1.537 -2.910 3.869 hybrid contribution -0.711 -0.374 -1.582 1.774 sum 1.324 1.163 -4.492 4.825 Atomic orbital electron populations 1.86587 1.17186 1.80281 1.50034 1.24936 0.85030 1.11473 0.98130 0.95046 0.91453 0.74242 0.80716 1.19611 0.94010 0.94059 0.93872 1.21165 0.99633 0.94067 0.98304 1.20967 0.91306 1.00099 0.91178 1.30949 1.16269 1.06379 1.22479 1.01913 0.72172 0.73600 0.73771 1.93625 1.65473 1.49970 1.85298 1.93619 1.85366 1.60836 1.54194 1.55376 1.25135 1.16630 1.88432 1.21685 0.87260 0.93238 0.96324 0.87065 1.23434 0.95993 1.01258 0.96474 1.21658 0.90475 1.00643 0.96732 0.87466 1.19324 0.95450 0.91256 0.95216 1.21133 0.93255 1.00399 1.03231 1.17290 0.90199 0.82022 0.98891 1.91562 1.77610 1.49985 1.91632 1.21096 1.02873 0.90593 1.07193 1.17248 0.92074 0.79970 0.99036 1.91566 1.85979 1.41223 1.91980 1.21056 0.94296 0.99264 1.03642 1.23666 0.98333 0.99681 0.97058 1.20870 0.94373 0.91997 0.96122 1.21137 1.00075 1.00064 0.94168 0.76766 0.89911 1.18259 1.17632 0.84697 0.83889 0.74418 0.89667 0.88022 0.83936 0.83361 0.83695 0.88083 0.89806 0.83663 0.84534 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 40. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.02 12.81 -35.23 -0.45 -0.47 16 2 C -0.09 0.13 2.79 36.00 0.10 0.23 16 3 Si 0.68 -1.53 29.85 -169.99 -5.07 -6.61 16 4 C -0.02 0.00 5.38 -104.62 -0.56 -0.56 16 5 C -0.11 0.01 9.69 -39.58 -0.38 -0.37 16 6 C -0.02 0.00 9.52 -39.58 -0.38 -0.37 16 7 C -0.67 0.17 5.95 -39.59 -0.24 -0.06 16 8 S 2.70 0.48 5.71 -107.50 -0.61 -0.14 16 9 O -0.95 -3.14 17.28 -57.18 -0.99 -4.13 16 10 O -0.95 -2.89 16.80 -57.18 -0.96 -3.85 16 11 N -1.10 3.62 5.73 -4.20 -0.02 3.60 16 12 C 0.12 -0.52 4.51 -67.12 -0.30 -0.82 16 13 H 0.11 -0.53 7.77 -51.93 -0.40 -0.93 16 14 C -0.13 0.58 7.33 -25.92 -0.19 0.39 16 15 C -0.08 0.34 3.80 -90.96 -0.35 0.00 16 16 H 0.11 -0.57 8.06 -51.93 -0.42 -0.99 16 17 C -0.01 0.03 5.29 -104.64 -0.55 -0.52 16 18 C -0.16 0.27 9.69 -39.51 -0.38 -0.11 16 19 C 0.14 -0.01 7.30 -39.43 -0.29 -0.30 16 20 F -0.13 -0.17 17.27 2.25 0.04 -0.13 16 21 C -0.20 0.06 10.01 -39.45 -0.39 -0.33 16 22 C 0.14 -0.07 7.30 -39.43 -0.29 -0.36 16 23 F -0.13 -0.09 17.27 2.25 0.04 -0.06 16 24 C -0.16 0.38 8.59 -39.51 -0.34 0.04 16 25 C -0.15 0.74 7.25 -25.92 -0.19 0.55 16 26 C -0.01 0.01 9.52 -39.58 -0.38 -0.36 16 27 C -0.14 0.12 8.67 -39.58 -0.34 -0.23 16 28 H 0.38 -1.51 8.74 45.56 0.40 -1.11 16 29 H 0.08 -0.29 7.96 -51.93 -0.41 -0.70 16 30 H -0.26 0.02 7.11 56.52 0.40 0.43 16 31 H -0.25 -0.24 7.05 56.52 0.40 0.16 16 32 H 0.14 -0.17 8.06 -52.49 -0.42 -0.59 16 33 H 0.14 -0.21 7.62 -52.49 -0.40 -0.61 16 34 H 0.42 -2.09 8.79 -34.47 -0.30 -2.39 16 35 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 36 H 0.10 -0.49 7.72 -51.93 -0.40 -0.89 16 37 H 0.14 -0.45 8.05 -52.49 -0.42 -0.87 16 38 H 0.15 -0.18 8.06 -52.49 -0.42 -0.60 16 39 H 0.15 -0.62 6.65 -52.49 -0.35 -0.97 16 40 H 0.10 -0.59 6.31 -51.93 -0.33 -0.92 16 41 H 0.08 -0.41 8.14 -51.93 -0.42 -0.83 16 42 H 0.15 -0.38 7.61 -52.48 -0.40 -0.78 16 43 H 0.14 -0.37 4.87 -52.49 -0.26 -0.63 16 LS Contribution 382.00 15.07 5.76 5.76 Total: 0.00 -10.89 382.00 -12.31 -23.21 By element: Atomic # 1 Polarization: -9.41 SS G_CDS: -4.59 Total: -14.00 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: -5.45 Total: -3.18 kcal Atomic # 7 Polarization: 3.62 SS G_CDS: -0.02 Total: 3.60 kcal Atomic # 8 Polarization: -6.05 SS G_CDS: -2.40 Total: -8.45 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.08 Total: -0.19 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.07 Total: -6.61 kcal Atomic # 16 Polarization: 0.48 SS G_CDS: -0.61 Total: -0.14 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -10.89 -12.31 -23.21 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_9705378_13421422.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.350 kcal (2) G-P(sol) polarization free energy of solvation -10.895 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.245 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.315 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.209 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.559 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.24 seconds