Wall clock time and date at job start Mon Mar 8 2021 13:42:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38214 * 119.99984 * 2 1 4 4 C 1.50694 * 120.00348 * 0.04739 * 3 2 1 5 5 H 1.09002 * 112.84972 * 11.42661 * 4 3 2 6 6 C 1.53780 * 113.61799 * 142.73371 * 4 3 2 7 7 C 1.53780 * 87.07975 * 139.97905 * 6 4 3 8 8 H 1.09002 * 113.61640 * 220.02013 * 7 6 4 9 9 N 1.46504 * 113.68894 * 89.12903 * 7 6 4 10 10 S 1.65604 * 119.99929 * 117.00262 * 9 7 6 11 11 O 1.42097 * 106.40205 * 178.92478 * 10 9 7 12 12 O 1.42102 * 106.39890 * 311.84473 * 10 9 7 13 13 C 1.76202 * 107.21936 * 65.38260 * 10 9 7 14 14 C 1.38210 * 119.99747 * 64.65668 * 13 10 9 15 15 C 1.50696 * 120.00004 * 0.02562 * 14 13 10 16 16 O 1.42894 * 109.47396 * 284.44192 * 15 14 13 17 17 Si 1.86309 * 109.46982 * 164.44531 * 15 14 13 18 18 C 1.38253 * 119.99666 * 179.97438 * 14 13 10 19 19 C 1.38213 * 120.00310 * 0.02562 * 18 14 13 20 20 C 1.38261 * 119.99879 * 359.97438 * 19 18 14 21 21 C 1.38205 * 119.99695 * 359.74440 * 20 19 18 22 22 C 1.53781 * 87.08526 * 334.56716 * 7 6 4 23 23 C 1.38257 * 119.99701 * 180.27914 * 3 2 1 24 24 C 1.38218 * 120.00198 * 359.74332 * 23 3 2 25 25 C 1.38258 * 119.99934 * 359.97438 * 24 23 3 26 26 C 1.38211 * 119.99905 * 0.02562 * 25 24 23 27 27 H 1.09002 * 109.46995 * 270.25612 * 1 2 3 28 28 H 1.08997 * 109.47139 * 30.25187 * 1 2 3 29 29 H 1.08999 * 109.47248 * 150.25663 * 1 2 3 30 30 H 1.08993 * 113.61303 * 254.53090 * 6 4 3 31 31 H 1.09000 * 113.61027 * 25.43236 * 6 4 3 32 32 H 0.96996 * 120.00395 * 296.99814 * 9 7 6 33 33 H 1.09000 * 109.47359 * 44.44766 * 15 14 13 34 34 H 0.96701 * 114.00172 * 180.02562 * 16 15 14 35 35 H 1.48503 * 109.99730 * 298.68319 * 17 15 14 36 36 H 1.48497 * 109.99828 * 59.99675 * 17 15 14 37 37 H 1.08008 * 120.00039 * 179.97438 * 18 14 13 38 38 H 1.08003 * 120.00245 * 179.97438 * 19 18 14 39 39 H 1.08000 * 119.99731 * 179.97438 * 20 19 18 40 40 H 1.08003 * 120.00093 * 180.27486 * 21 20 19 41 41 H 1.08991 * 113.61672 * 270.88282 * 22 7 6 42 42 H 1.09004 * 113.68988 * 139.98646 * 22 7 6 43 43 H 1.07995 * 119.99958 * 179.77259 * 23 3 2 44 44 H 1.07997 * 120.00395 * 180.02562 * 24 23 3 45 45 H 1.08003 * 120.00355 * 180.02562 * 25 24 23 46 46 H 1.08001 * 120.00516 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 1.4447 2.5021 0.0011 5 1 0.3805 2.3763 0.2008 6 6 2.1084 3.5959 0.8542 7 6 1.7282 4.5854 -0.2599 8 1 2.5021 5.3233 -0.4713 9 7 0.4025 5.1847 -0.0877 10 16 0.2551 6.8194 0.1323 11 8 -1.1365 7.0858 0.2408 12 8 1.1952 7.1755 1.1366 13 6 0.7961 7.5966 -1.3536 14 6 0.0957 7.4030 -2.5293 15 6 -1.1311 6.5279 -2.5401 16 8 -0.7375 5.1552 -2.4866 17 14 -2.0997 6.8356 -4.1016 18 6 0.5199 8.0132 -3.6951 19 6 1.6447 8.8164 -3.6850 20 6 2.3454 9.0099 -2.5089 21 6 1.9180 8.4046 -1.3423 22 6 1.7417 3.3858 -1.2220 23 6 3.5806 1.1969 -0.0058 24 6 4.2717 -0.0001 -0.0063 25 6 3.5804 -1.1974 -0.0004 26 6 2.1983 -1.1974 0.0054 27 1 -0.3633 0.0046 1.0277 28 1 -0.3633 0.8877 -0.5177 29 1 -0.3634 -0.8923 -0.5098 30 1 1.5970 3.7837 1.7982 31 1 3.1839 3.4644 0.9731 32 1 -0.3889 4.6241 -0.1025 33 1 -1.7520 6.7618 -1.6754 34 1 -1.4779 4.5333 -2.4907 35 1 -2.5420 8.2523 -4.1539 36 1 -1.2641 6.5204 -5.2880 37 1 -0.0272 7.8617 -4.6139 38 1 1.9764 9.2927 -4.5958 39 1 3.2246 9.6372 -2.5011 40 1 2.4627 8.5594 -0.4226 41 1 2.7169 3.1969 -1.6707 42 1 0.9348 3.4029 -1.9546 43 1 4.1206 2.1321 -0.0095 44 1 5.3517 -0.0002 -0.0104 45 1 4.1204 -2.1328 -0.0004 46 1 1.6582 -2.1326 0.0096 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_9744656_2726874.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:42:43 Heat of formation + Delta-G solvation = -16.180163 kcal Electronic energy + Delta-G solvation = -30967.999364 eV Core-core repulsion = 26917.133183 eV Total energy + Delta-G solvation = -4050.866182 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.123 amu Computer time = 2.17 seconds Orbital eigenvalues (eV) -41.30287 -40.71824 -39.20209 -38.43168 -37.53684 -36.83146 -34.30188 -33.60599 -33.05511 -32.49625 -31.29110 -27.84462 -27.01293 -26.61314 -25.96586 -24.50399 -23.13192 -22.74141 -21.84710 -20.81285 -20.08761 -19.17358 -18.57251 -18.42236 -17.47978 -17.39976 -17.06670 -16.73859 -16.40182 -16.00559 -15.90411 -15.70929 -15.28954 -15.11132 -15.02281 -14.89348 -14.59220 -14.18781 -14.00282 -13.93974 -13.86839 -13.60815 -13.40786 -13.32652 -13.29283 -13.19253 -13.04982 -12.97022 -12.88438 -12.39579 -12.23057 -12.15679 -12.04702 -11.78341 -11.63723 -11.46748 -11.11562 -10.59231 -10.44223 -10.34376 -10.14202 -9.61677 -9.36427 -5.08758 -0.61960 -0.32154 0.02978 0.49414 0.54260 1.12197 1.54163 1.83552 1.92835 2.26891 2.71292 2.85846 3.07855 3.36896 3.51869 3.60862 3.65538 3.71779 3.76064 3.80156 3.94579 4.02699 4.03808 4.06505 4.09258 4.19766 4.23752 4.26738 4.38297 4.41739 4.47680 4.61024 4.67037 4.69779 4.75599 4.78357 4.82952 4.89840 4.93871 5.03080 5.03655 5.07874 5.15871 5.16385 5.22554 5.30124 5.44994 5.61275 5.67098 5.69168 5.82460 6.04568 6.17655 6.38120 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.083 4.083 3 C -0.070 4.070 4 C -0.077 4.077 5 H 0.102 0.898 6 C -0.145 4.145 7 C 0.136 3.864 8 H 0.096 0.904 9 N -1.077 6.077 10 S 2.700 3.300 11 O -0.958 6.958 12 O -0.956 6.956 13 C -0.659 4.659 14 C 0.036 3.964 15 C -0.130 4.130 16 O -0.535 6.535 17 Si 0.701 3.299 18 C -0.146 4.146 19 C -0.057 4.057 20 C -0.134 4.134 21 C -0.021 4.021 22 C -0.131 4.131 23 C -0.114 4.114 24 C -0.124 4.124 25 C -0.122 4.122 26 C -0.120 4.120 27 H 0.070 0.930 28 H 0.070 0.930 29 H 0.065 0.935 30 H 0.078 0.922 31 H 0.095 0.905 32 H 0.419 0.581 33 H 0.112 0.888 34 H 0.385 0.615 35 H -0.254 1.254 36 H -0.249 1.249 37 H 0.130 0.870 38 H 0.135 0.865 39 H 0.138 0.862 40 H 0.148 0.852 41 H 0.089 0.911 42 H 0.090 0.910 43 H 0.122 0.878 44 H 0.120 0.880 45 H 0.120 0.880 46 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.964 -2.734 -3.499 4.544 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.083 4.083 3 C -0.070 4.070 4 C -0.095 4.095 5 H 0.120 0.880 6 C -0.184 4.184 7 C 0.028 3.972 8 H 0.114 0.886 9 N -0.836 5.836 10 S 2.789 3.211 11 O -0.948 6.948 12 O -0.946 6.946 13 C -0.745 4.745 14 C 0.035 3.965 15 C -0.240 4.240 16 O -0.342 6.342 17 Si 0.602 3.398 18 C -0.164 4.164 19 C -0.075 4.075 20 C -0.153 4.153 21 C -0.041 4.041 22 C -0.170 4.170 23 C -0.132 4.132 24 C -0.142 4.142 25 C -0.140 4.140 26 C -0.138 4.138 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.084 0.916 30 H 0.097 0.903 31 H 0.113 0.887 32 H 0.255 0.745 33 H 0.130 0.870 34 H 0.233 0.767 35 H -0.178 1.178 36 H -0.174 1.174 37 H 0.147 0.853 38 H 0.153 0.847 39 H 0.156 0.844 40 H 0.166 0.834 41 H 0.108 0.892 42 H 0.108 0.892 43 H 0.140 0.860 44 H 0.138 0.862 45 H 0.138 0.862 46 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -0.576 -1.449 -3.496 3.828 hybrid contribution 0.523 -0.028 -0.477 0.708 sum -0.053 -1.478 -3.974 4.240 Atomic orbital electron populations 1.20856 0.91311 1.02890 1.02423 1.19794 0.96035 0.92629 0.99845 1.19558 0.93427 0.93897 1.00106 1.21629 0.99665 0.90551 0.97638 0.87994 1.23593 1.01789 0.94763 0.98293 1.21479 0.83256 0.95349 0.97127 0.88647 1.55010 1.13646 1.25246 1.89669 1.01762 0.73493 0.72452 0.73410 1.93558 1.31276 1.83806 1.86176 1.93602 1.64323 1.82465 1.54169 1.30823 1.07770 1.16090 1.19817 1.18845 0.92391 0.93201 0.92078 1.25333 0.98790 0.84931 1.14933 1.86512 1.36725 1.13287 1.97664 0.94790 0.84859 0.84733 0.75417 1.21177 0.98111 0.99640 0.97451 1.21465 0.93107 0.94277 0.98682 1.21394 1.00746 1.00621 0.92526 1.21099 0.92224 0.91231 0.99502 1.23403 1.03539 0.93597 0.96441 1.20995 0.93685 0.98091 1.00467 1.21137 0.99898 0.92556 1.00602 1.21151 0.94367 0.98148 1.00295 1.21056 0.94328 0.97523 1.00873 0.91143 0.91094 0.91572 0.90308 0.88673 0.74457 0.87040 0.76680 1.17825 1.17412 0.85277 0.84692 0.84416 0.83442 0.89213 0.89170 0.86022 0.86184 0.86197 0.86184 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.17 9.32 36.01 0.34 0.50 16 2 C -0.08 -0.05 5.88 -104.62 -0.62 -0.67 16 3 C -0.07 -0.03 5.29 -104.63 -0.55 -0.58 16 4 C -0.08 0.10 3.36 -90.96 -0.31 -0.20 16 5 H 0.10 -0.24 6.07 -51.93 -0.32 -0.55 16 6 C -0.15 0.12 7.26 -25.92 -0.19 -0.06 16 7 C 0.14 -0.15 4.43 -67.12 -0.30 -0.44 16 8 H 0.10 -0.10 8.05 -51.93 -0.42 -0.52 16 9 N -1.08 1.11 4.03 -4.20 -0.02 1.09 16 10 S 2.70 5.75 5.02 -107.50 -0.54 5.21 16 11 O -0.96 -3.86 15.51 -57.17 -0.89 -4.75 16 12 O -0.96 -4.59 16.72 -57.17 -0.96 -5.54 16 13 C -0.66 -1.32 5.89 -39.58 -0.23 -1.55 16 14 C 0.04 0.06 5.28 -104.63 -0.55 -0.49 16 15 C -0.13 0.08 2.02 36.00 0.07 0.15 16 16 O -0.54 1.59 9.55 -35.23 -0.34 1.26 16 17 Si 0.70 -1.09 30.22 -169.99 -5.14 -6.23 16 18 C -0.15 -0.21 8.66 -39.59 -0.34 -0.55 16 19 C -0.06 -0.01 10.05 -39.58 -0.40 -0.41 16 20 C -0.13 -0.02 10.05 -39.59 -0.40 -0.42 16 21 C -0.02 -0.03 9.55 -39.59 -0.38 -0.41 16 22 C -0.13 0.22 7.33 -25.92 -0.19 0.03 16 23 C -0.11 -0.07 8.61 -39.58 -0.34 -0.41 16 24 C -0.12 -0.11 10.05 -39.58 -0.40 -0.50 16 25 C -0.12 -0.12 10.05 -39.58 -0.40 -0.52 16 26 C -0.12 -0.11 9.70 -39.58 -0.38 -0.50 16 27 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 28 H 0.07 -0.18 6.36 -51.93 -0.33 -0.51 16 29 H 0.07 -0.12 8.09 -51.93 -0.42 -0.54 16 30 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.09 -0.11 6.31 -51.93 -0.33 -0.44 16 32 H 0.42 -1.34 8.27 -34.47 -0.29 -1.62 16 33 H 0.11 -0.04 5.37 -51.93 -0.28 -0.31 16 34 H 0.38 -2.91 8.74 45.56 0.40 -2.51 16 35 H -0.25 -0.39 7.11 56.52 0.40 0.02 16 36 H -0.25 -0.16 6.73 56.52 0.38 0.22 16 37 H 0.13 0.09 4.91 -52.48 -0.26 -0.17 16 38 H 0.14 -0.30 8.06 -52.48 -0.42 -0.72 16 39 H 0.14 -0.32 8.06 -52.49 -0.42 -0.74 16 40 H 0.15 0.04 7.34 -52.48 -0.39 -0.35 16 41 H 0.09 -0.12 7.72 -51.93 -0.40 -0.52 16 42 H 0.09 -0.18 7.12 -51.93 -0.37 -0.55 16 43 H 0.12 -0.11 6.66 -52.49 -0.35 -0.46 16 44 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 45 H 0.12 -0.07 8.06 -52.48 -0.42 -0.49 16 46 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 LS Contribution 375.21 15.07 5.65 5.65 Total: 0.00 -9.38 375.21 -13.70 -23.08 By element: Atomic # 1 Polarization: -6.82 SS G_CDS: -5.92 Total: -12.74 kcal Atomic # 6 Polarization: -1.46 SS G_CDS: -5.56 Total: -7.03 kcal Atomic # 7 Polarization: 1.11 SS G_CDS: -0.02 Total: 1.09 kcal Atomic # 8 Polarization: -6.86 SS G_CDS: -2.18 Total: -9.04 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.14 Total: -6.23 kcal Atomic # 16 Polarization: 5.75 SS G_CDS: -0.54 Total: 5.21 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -9.38 -13.70 -23.08 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_9744656_2726874.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.896 kcal (2) G-P(sol) polarization free energy of solvation -9.378 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.482 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.699 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.076 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.180 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.17 seconds