Wall clock time and date at job start Mon Mar 8 2021 14:31:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34232 * 117.00056 * 2 1 4 4 O 1.20825 * 120.00119 * 359.97438 * 3 2 1 5 5 C 1.50699 * 119.99789 * 179.97438 * 3 2 1 6 6 H 1.08994 * 112.85222 * 311.19733 * 5 3 2 7 7 C 1.54050 * 113.69257 * 82.47266 * 5 3 2 8 8 C 1.53785 * 86.98696 * 139.98430 * 7 5 3 9 9 H 1.09001 * 113.61502 * 219.97815 * 8 7 5 10 10 N 1.46500 * 113.61037 * 89.16190 * 8 7 5 11 11 N 1.40038 * 126.13190 * 326.46936 * 10 8 7 12 12 C 1.30910 * 108.82910 * 180.29280 * 11 10 8 13 13 C 1.39352 * 108.76186 * 359.76058 * 12 11 10 14 14 C 1.36618 * 126.12840 * 146.35454 * 10 8 7 15 15 C 1.46802 * 126.48509 * 359.97438 * 14 10 8 16 16 C 1.34505 * 119.99996 * 185.01999 * 15 14 10 17 17 C 1.47363 * 120.00028 * 174.87160 * 16 15 14 18 18 N 1.31961 * 126.09192 * 0.16815 * 17 16 15 19 19 N 1.40059 * 108.06124 * 180.29394 * 18 17 16 20 20 C 1.35109 * 108.21360 * 359.72261 * 19 18 17 21 21 C 1.34969 * 108.07100 * 359.97438 * 20 19 18 22 22 C 1.50705 * 126.08009 * 180.02562 * 21 20 19 23 23 O 1.42900 * 109.47115 * 105.02687 * 22 21 20 24 24 Si 1.86296 * 109.47396 * 345.02241 * 22 21 20 25 25 C 1.53774 * 87.17324 * 334.56991 * 8 7 5 26 26 H 1.09002 * 109.46863 * 300.00379 * 1 2 3 27 27 H 1.08997 * 109.46562 * 59.99995 * 1 2 3 28 28 H 1.08994 * 109.46686 * 180.02562 * 1 2 3 29 29 H 1.09002 * 113.61590 * 25.47790 * 7 5 3 30 30 H 1.08998 * 113.69670 * 254.50109 * 7 5 3 31 31 H 1.07996 * 125.61442 * 179.75943 * 12 11 10 32 32 H 1.07999 * 126.17882 * 180.02562 * 13 12 11 33 33 H 1.08000 * 120.00189 * 5.02802 * 15 14 10 34 34 H 1.07998 * 120.00361 * 354.87474 * 16 15 14 35 35 H 0.97000 * 125.89920 * 179.75988 * 19 18 17 36 36 H 1.07998 * 125.96409 * 180.02562 * 20 19 18 37 37 H 1.09007 * 109.47052 * 225.02071 * 22 21 20 38 38 H 0.96703 * 114.00191 * 299.99147 * 23 22 21 39 39 H 1.48500 * 110.00140 * 180.02562 * 24 22 21 40 40 H 1.48501 * 110.00064 * 301.32237 * 24 22 21 41 41 H 1.09001 * 113.61801 * 140.02083 * 25 8 7 42 42 H 1.09007 * 113.61199 * 270.92538 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2094 -0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0234 0.6365 0.7566 7 6 4.1948 1.1224 -1.3976 8 6 5.1828 2.2262 -0.9849 9 1 5.4003 2.9377 -1.7815 10 7 6.3910 1.7176 -0.3309 11 7 6.4688 0.5940 0.5013 12 6 7.7061 0.4519 0.9048 13 6 8.4785 1.4698 0.3488 14 6 7.6443 2.2533 -0.4252 15 6 8.0303 3.4404 -1.1979 16 6 9.3244 3.7972 -1.2808 17 6 9.7250 4.9203 -2.1468 18 7 8.9186 5.6572 -2.8870 19 7 9.6952 6.6090 -3.5596 20 6 10.9857 6.4306 -3.2014 21 6 11.0397 5.4019 -2.3294 22 6 12.2830 4.8595 -1.6726 23 8 12.3229 5.2803 -0.3076 24 14 13.7872 5.5016 -2.5647 25 6 4.1079 2.7142 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 -0.3632 0.5138 -0.8900 28 1 -0.3632 -1.0276 0.0005 29 1 3.5288 1.4138 -2.2098 30 1 4.6664 0.1536 -1.5627 31 1 8.0683 -0.3260 1.5605 32 1 9.5380 1.6190 0.4960 33 1 7.2751 4.0272 -1.6996 34 1 10.0701 3.2607 -0.7129 35 1 9.3638 7.2809 -4.1759 36 1 11.8270 7.0105 -3.5512 37 1 12.2716 3.7704 -1.7168 38 1 12.3350 6.2404 -0.1921 39 1 15.0199 4.9734 -1.9270 40 1 13.7416 5.0976 -3.9930 41 1 4.5092 3.0298 0.9635 42 1 3.4181 3.4402 -0.4301 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_6_1326496_15431928.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:31:47 Heat of formation + Delta-G solvation = 88.227654 kcal Electronic energy + Delta-G solvation = -27188.636710 eV Core-core repulsion = 23140.631771 eV Total energy + Delta-G solvation = -4048.004939 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.136 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.40658 -42.27187 -41.41730 -39.25803 -37.71490 -37.23515 -35.85827 -32.91602 -32.22028 -31.83650 -29.42036 -29.25311 -27.07440 -26.92884 -26.40487 -25.01688 -23.46242 -22.20957 -21.57845 -21.29188 -20.07584 -19.43096 -19.32495 -18.76757 -17.91731 -17.53538 -17.37659 -17.34650 -16.33004 -16.09448 -15.91371 -15.73735 -15.52589 -15.29925 -15.23743 -14.98269 -14.53178 -14.30042 -14.15049 -14.03335 -13.76838 -13.62769 -13.41582 -13.11334 -12.83770 -12.71411 -12.40907 -12.27953 -12.07275 -11.92788 -11.82546 -11.77278 -11.72554 -11.56478 -11.19810 -10.67825 -10.34831 -9.91280 -9.72780 -8.91263 -5.12147 -0.24713 0.77782 1.20236 1.26337 1.29438 1.37561 1.59760 1.73760 1.78157 1.91635 1.96211 2.36110 3.00858 3.25836 3.30476 3.43565 3.53577 3.54379 3.63432 3.76950 3.97459 3.98647 4.11272 4.19741 4.21099 4.25187 4.28473 4.37501 4.43395 4.47490 4.55891 4.63305 4.69821 4.73077 4.76602 4.80881 4.85033 4.95142 5.04309 5.31278 5.41753 5.44130 5.46045 5.76225 6.06090 6.11344 6.47083 6.62597 6.79766 6.80245 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.356 6.356 3 C 0.471 3.529 4 O -0.507 6.507 5 C -0.105 4.105 6 H 0.139 0.861 7 C -0.118 4.118 8 C 0.134 3.866 9 H 0.123 0.877 10 N -0.352 5.352 11 N -0.288 5.288 12 C 0.049 3.951 13 C -0.251 4.251 14 C 0.114 3.886 15 C -0.077 4.077 16 C -0.043 4.043 17 C 0.122 3.878 18 N -0.280 5.280 19 N -0.466 5.466 20 C 0.070 3.930 21 C -0.253 4.253 22 C -0.028 4.028 23 O -0.541 6.541 24 Si 0.683 3.317 25 C -0.125 4.125 26 H 0.064 0.936 27 H 0.063 0.937 28 H 0.103 0.897 29 H 0.104 0.896 30 H 0.095 0.905 31 H 0.186 0.814 32 H 0.152 0.848 33 H 0.131 0.869 34 H 0.142 0.858 35 H 0.445 0.555 36 H 0.184 0.816 37 H 0.113 0.887 38 H 0.377 0.623 39 H -0.254 1.254 40 H -0.257 1.257 41 H 0.086 0.914 42 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.467 3.723 -2.822 5.818 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.272 6.272 3 C 0.314 3.686 4 O -0.394 6.394 5 C -0.124 4.124 6 H 0.157 0.843 7 C -0.156 4.156 8 C 0.031 3.969 9 H 0.141 0.859 10 N -0.135 5.135 11 N -0.109 5.109 12 C -0.135 4.135 13 C -0.280 4.280 14 C -0.011 4.011 15 C -0.100 4.100 16 C -0.066 4.066 17 C -0.041 4.041 18 N -0.105 5.105 19 N -0.174 5.174 20 C -0.078 4.078 21 C -0.265 4.265 22 C -0.141 4.141 23 O -0.345 6.345 24 Si 0.585 3.415 25 C -0.163 4.163 26 H 0.082 0.918 27 H 0.082 0.918 28 H 0.121 0.879 29 H 0.123 0.877 30 H 0.114 0.886 31 H 0.203 0.797 32 H 0.170 0.830 33 H 0.149 0.851 34 H 0.160 0.840 35 H 0.290 0.710 36 H 0.201 0.799 37 H 0.131 0.869 38 H 0.224 0.776 39 H -0.178 1.178 40 H -0.182 1.182 41 H 0.105 0.895 42 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 1.463 2.941 -3.557 4.842 hybrid contribution 0.780 0.201 -0.063 0.808 sum 2.243 3.142 -3.620 5.292 Atomic orbital electron populations 1.23321 0.76072 1.03986 1.02655 1.86539 1.23617 1.33320 1.83726 1.23630 0.91695 0.81379 0.71923 1.90673 1.67042 1.36433 1.45275 1.22674 0.87176 1.00804 1.01761 0.84349 1.23226 0.96635 1.00426 0.95341 1.22066 0.82309 0.97060 0.95482 0.85920 1.48633 1.05683 1.21538 1.37665 1.77229 1.20799 1.02930 1.09971 1.23740 0.90476 0.99394 0.99883 1.21850 1.00911 0.99276 1.05926 1.20031 0.85281 0.96051 0.99775 1.21200 0.96915 0.93633 0.98248 1.21194 0.95978 0.93425 0.95970 1.20731 0.91161 0.95747 0.96497 1.77693 1.17843 1.03049 1.11883 1.46244 1.04857 1.28660 1.37610 1.22356 0.88763 0.98783 0.97880 1.20593 0.96174 1.02580 1.07152 1.24294 1.00760 1.01997 0.87009 1.86508 1.96923 1.27846 1.23265 0.95266 0.76915 0.90701 0.78617 1.23413 0.96407 0.95398 1.01106 0.91767 0.91791 0.87858 0.87742 0.88629 0.79713 0.83000 0.85141 0.83997 0.71018 0.79933 0.86946 0.77573 1.17804 1.18157 0.89483 0.86646 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 101.05 1.07 1.08 16 2 O -0.36 -1.00 10.57 -39.26 -0.41 -1.41 16 3 C 0.47 1.50 7.49 36.01 0.27 1.77 16 4 O -0.51 -2.81 15.65 -18.75 -0.29 -3.10 16 5 C -0.11 -0.14 3.89 -90.81 -0.35 -0.49 16 6 H 0.14 0.28 7.15 -51.93 -0.37 -0.09 16 7 C -0.12 0.01 7.21 -25.77 -0.19 -0.18 16 8 C 0.13 0.02 4.71 -67.12 -0.32 -0.30 16 9 H 0.12 -0.20 7.22 -51.93 -0.37 -0.57 16 10 N -0.35 -0.71 3.75 -50.08 -0.19 -0.90 16 11 N -0.29 -0.87 10.91 30.53 0.33 -0.54 16 12 C 0.05 0.08 11.97 -17.53 -0.21 -0.13 16 13 C -0.25 -0.34 10.21 -39.19 -0.40 -0.74 16 14 C 0.11 0.21 6.91 -82.30 -0.57 -0.36 16 15 C -0.08 -0.07 9.38 -37.44 -0.35 -0.42 16 16 C -0.04 -0.03 9.45 -37.19 -0.35 -0.38 16 17 C 0.12 0.15 6.98 -82.97 -0.58 -0.43 16 18 N -0.28 -0.42 12.28 33.30 0.41 -0.01 16 19 N -0.47 0.80 7.34 30.41 0.22 1.02 16 20 C 0.07 -0.19 10.51 -17.27 -0.18 -0.37 16 21 C -0.25 0.18 5.40 -104.66 -0.57 -0.38 16 22 C -0.03 0.04 2.80 36.01 0.10 0.14 16 23 O -0.54 0.45 12.88 -35.23 -0.45 0.00 16 24 Si 0.68 -1.75 30.74 -169.99 -5.23 -6.98 16 25 C -0.13 -0.07 7.20 -25.92 -0.19 -0.26 16 26 H 0.06 0.03 8.13 -51.93 -0.42 -0.39 16 27 H 0.06 0.01 8.13 -51.93 -0.42 -0.41 16 28 H 0.10 -0.20 8.14 -51.93 -0.42 -0.63 16 29 H 0.10 -0.14 8.10 -51.93 -0.42 -0.56 16 30 H 0.10 0.06 8.14 -51.93 -0.42 -0.36 16 31 H 0.19 -0.23 8.06 -52.49 -0.42 -0.65 16 32 H 0.15 -0.08 7.28 -52.49 -0.38 -0.46 16 33 H 0.13 0.07 7.02 -52.49 -0.37 -0.30 16 34 H 0.14 -0.04 6.90 -52.49 -0.36 -0.40 16 35 H 0.44 -2.11 8.96 -182.63 -1.64 -3.75 16 36 H 0.18 -1.22 6.40 -52.49 -0.34 -1.55 16 37 H 0.11 -0.10 7.96 -51.93 -0.41 -0.51 16 38 H 0.38 -1.71 8.70 45.56 0.40 -1.31 16 39 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 40 H -0.26 -0.01 7.11 56.52 0.40 0.40 16 41 H 0.09 0.12 8.14 -51.93 -0.42 -0.31 16 42 H 0.12 0.05 7.44 -51.93 -0.39 -0.34 16 LS Contribution 364.87 15.07 5.50 5.50 Total: 0.00 -10.64 364.87 -9.31 -19.95 By element: Atomic # 1 Polarization: -5.68 SS G_CDS: -6.39 Total: -12.07 kcal Atomic # 6 Polarization: 1.36 SS G_CDS: -2.81 Total: -1.46 kcal Atomic # 7 Polarization: -1.21 SS G_CDS: 0.78 Total: -0.43 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -1.16 Total: -4.52 kcal Atomic # 14 Polarization: -1.75 SS G_CDS: -5.23 Total: -6.98 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -10.64 -9.31 -19.95 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_6_1326496_15431928.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.182 kcal (2) G-P(sol) polarization free energy of solvation -10.643 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 97.539 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.311 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.955 kcal (6) G-S(sol) free energy of system = (1) + (5) 88.228 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds