Wall clock time and date at job start Mon Mar 8 2021 13:31:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34222 * 116.99997 * 2 1 4 4 O 1.20822 * 120.00243 * 359.97438 * 3 2 1 5 5 C 1.50705 * 120.00023 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.85016 * 48.80000 * 5 3 2 7 7 C 1.53781 * 113.61418 * 179.97438 * 5 3 2 8 8 C 1.53775 * 87.07935 * 140.06297 * 7 5 3 9 9 H 1.08999 * 113.61459 * 219.93105 * 8 7 5 10 10 N 1.46506 * 113.61548 * 89.11685 * 8 7 5 11 11 C 1.35142 * 125.88532 * 274.99836 * 10 8 7 12 12 C 1.34929 * 108.09310 * 179.97438 * 11 10 8 13 13 C 1.41267 * 107.83925 * 0.02562 * 12 11 10 14 14 C 1.47185 * 126.10093 * 179.97438 * 13 12 11 15 15 C 1.34913 * 120.00254 * 179.97438 * 14 13 12 16 16 C 1.46177 * 120.00465 * 179.97438 * 15 14 13 17 17 C 1.40070 * 126.20973 * 179.71477 * 16 15 14 18 18 C 1.46303 * 127.08791 * 0.02562 * 17 16 15 19 19 O 1.22491 * 119.99773 * 179.97438 * 18 17 16 20 20 O 1.22481 * 120.00421 * 359.97438 * 18 17 16 21 21 C 1.46543 * 105.82015 * 179.86863 * 17 16 15 22 22 C 1.34489 * 106.83239 * 0.39916 * 21 17 16 23 23 C 1.50705 * 125.18731 * 179.76985 * 22 21 17 24 24 O 1.42908 * 109.47008 * 244.97870 * 23 22 21 25 25 Si 1.86301 * 109.47280 * 4.97949 * 23 22 21 26 26 N 1.36384 * 126.20183 * 0.03437 * 16 15 14 27 27 N 1.32049 * 107.79932 * 359.75416 * 13 12 11 28 28 C 1.53777 * 87.08466 * 334.56745 * 8 7 5 29 29 H 1.09005 * 109.46543 * 60.00574 * 1 2 3 30 30 H 1.09005 * 109.46989 * 179.97438 * 1 2 3 31 31 H 1.08991 * 109.47353 * 300.00364 * 1 2 3 32 32 H 1.09004 * 113.61633 * 25.51324 * 7 5 3 33 33 H 1.09000 * 113.61389 * 254.61189 * 7 5 3 34 34 H 1.07997 * 125.95299 * 359.96794 * 11 10 8 35 35 H 1.07998 * 126.08009 * 180.02562 * 12 11 10 36 36 H 1.08000 * 119.99868 * 0.02562 * 14 13 12 37 37 H 1.08009 * 119.99668 * 0.02562 * 15 14 13 38 38 H 1.07998 * 126.58549 * 180.15293 * 21 17 16 39 39 H 1.08993 * 109.47111 * 124.98046 * 23 22 21 40 40 H 0.96702 * 113.99840 * 60.00623 * 24 23 22 41 41 H 1.48499 * 109.99776 * 58.68065 * 25 23 22 42 42 H 1.48496 * 109.99879 * 180.02562 * 25 23 22 43 43 H 0.96996 * 124.93428 * 359.97087 * 26 16 15 44 44 H 1.09000 * 113.62016 * 139.98264 * 28 8 7 45 45 H 1.09000 * 113.61600 * 270.88290 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0240 0.6361 -0.7549 7 6 4.1078 2.7142 -0.0001 8 6 5.1819 2.2269 0.9865 9 1 5.3988 2.9391 1.7826 10 7 6.3908 1.7178 0.3338 11 6 6.5726 0.4604 -0.1268 12 6 7.8101 0.3840 -0.6591 13 6 8.4198 1.6508 -0.5205 14 6 9.7749 2.0144 -0.9654 15 6 10.2355 3.2673 -0.7703 16 6 11.5815 3.6283 -1.2116 17 6 12.1860 4.8851 -1.0807 18 6 11.6038 6.0860 -0.4812 19 8 12.2533 7.1235 -0.4342 20 8 10.4670 6.0540 -0.0265 21 6 13.5231 4.7480 -1.6645 22 6 13.6306 3.4794 -2.0979 23 6 14.8426 2.8928 -2.7748 24 8 14.5129 2.5396 -4.1197 25 14 16.2187 4.1486 -2.7820 26 7 12.4743 2.8041 -1.8309 27 7 7.5554 2.4518 0.0751 28 6 4.1925 1.1236 1.3970 29 1 -0.3632 0.5138 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8899 32 1 3.4177 3.4405 0.4293 33 1 4.5100 3.0289 -0.9631 34 1 5.8529 -0.3433 -0.0773 35 1 8.2553 -0.4901 -1.1109 36 1 10.4002 1.2783 -1.4487 37 1 9.6099 4.0035 -0.2873 38 1 14.2760 5.5189 -1.7367 39 1 15.1655 2.0030 -2.2343 40 1 14.2167 3.2845 -4.6606 41 1 16.5492 4.5478 -1.3904 42 1 17.4195 3.5823 -3.4473 43 1 12.3117 1.8732 -2.0497 44 1 4.6629 0.1543 1.5620 45 1 3.5255 1.4151 2.2084 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_6_16734034_15431852.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:31:37 Heat of formation + Delta-G solvation = -76.375265 kcal Electronic energy + Delta-G solvation = -32013.503677 eV Core-core repulsion = 27271.852146 eV Total energy + Delta-G solvation = -4741.651531 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.132 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -41.69546 -40.73827 -40.29829 -38.64722 -36.76627 -36.72745 -36.20686 -33.95187 -31.98297 -31.10303 -30.12807 -29.85906 -29.05534 -28.44343 -26.44028 -26.34026 -24.87966 -23.06752 -22.14292 -20.97387 -20.52375 -19.96494 -19.59573 -18.73234 -18.30826 -17.66789 -17.33025 -16.89146 -16.83372 -16.49524 -15.77882 -15.24310 -15.10362 -14.83488 -14.60404 -14.23504 -13.98981 -13.79979 -13.53891 -13.47459 -13.43687 -13.25119 -13.08335 -12.95965 -12.84858 -12.73935 -12.45566 -12.41478 -12.27314 -12.24687 -11.60502 -11.37499 -11.36168 -11.25851 -11.12927 -10.79897 -10.75631 -10.62748 -10.30950 -10.27582 -9.51275 -8.85608 -8.45611 -7.92158 -7.44220 -7.32073 -7.13290 -6.83258 -3.87742 1.36797 1.70935 2.07457 2.24559 2.36336 2.39856 2.69215 2.91667 3.04691 3.28569 3.65080 3.80785 3.82031 3.97307 4.11852 4.30139 4.54860 4.57981 4.65747 4.66899 4.73545 4.82162 4.96635 5.05260 5.07880 5.10650 5.16256 5.22132 5.41663 5.52014 5.57028 5.63687 5.75805 5.77772 5.91762 5.92714 6.07153 6.12365 6.30186 6.31944 6.73344 6.83518 6.85357 7.01852 7.07762 7.20420 7.28962 7.54544 7.72673 7.79353 7.92114 8.12017 10.67071 11.12555 Molecular weight = 373.13amu Principal moments of inertia in cm(-1) A = 0.017515 B = 0.001681 C = 0.001577 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1598.203744 B =16647.888726 C =17754.728015 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.472 3.528 4 O -0.501 6.501 5 C -0.115 4.115 6 H 0.128 0.872 7 C -0.126 4.126 8 C 0.141 3.859 9 H 0.122 0.878 10 N -0.364 5.364 11 C 0.042 3.958 12 C -0.260 4.260 13 C 0.124 3.876 14 C -0.157 4.157 15 C 0.010 3.990 16 C 0.050 3.950 17 C -0.158 4.158 18 C 0.542 3.458 19 O -0.692 6.692 20 O -0.688 6.688 21 C -0.159 4.159 22 C -0.025 4.025 23 C -0.045 4.045 24 O -0.551 6.551 25 Si 0.717 3.283 26 N -0.546 5.546 27 N -0.272 5.272 28 C -0.123 4.123 29 H 0.063 0.937 30 H 0.102 0.898 31 H 0.063 0.937 32 H 0.116 0.884 33 H 0.090 0.910 34 H 0.169 0.831 35 H 0.146 0.854 36 H 0.115 0.885 37 H 0.165 0.835 38 H 0.145 0.855 39 H 0.105 0.895 40 H 0.381 0.619 41 H -0.254 1.254 42 H -0.259 1.259 43 H 0.405 0.595 44 H 0.094 0.906 45 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.966 -19.037 -2.971 23.224 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.315 3.685 4 O -0.388 6.388 5 C -0.134 4.134 6 H 0.145 0.855 7 C -0.165 4.165 8 C 0.038 3.962 9 H 0.139 0.861 10 N -0.146 5.146 11 C -0.102 4.102 12 C -0.289 4.289 13 C -0.040 4.040 14 C -0.178 4.178 15 C -0.012 4.012 16 C -0.061 4.061 17 C -0.167 4.167 18 C 0.378 3.622 19 O -0.608 6.608 20 O -0.604 6.604 21 C -0.184 4.184 22 C -0.136 4.136 23 C -0.155 4.155 24 O -0.357 6.357 25 Si 0.617 3.383 26 N -0.143 5.143 27 N -0.093 5.093 28 C -0.161 4.161 29 H 0.082 0.918 30 H 0.120 0.880 31 H 0.082 0.918 32 H 0.134 0.866 33 H 0.109 0.891 34 H 0.186 0.814 35 H 0.164 0.836 36 H 0.133 0.867 37 H 0.183 0.817 38 H 0.163 0.837 39 H 0.123 0.877 40 H 0.229 0.771 41 H -0.178 1.178 42 H -0.185 1.185 43 H 0.241 0.759 44 H 0.112 0.888 45 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -12.782 -17.728 -1.829 21.932 hybrid contribution -0.515 -2.226 -0.363 2.314 sum -13.297 -19.954 -2.191 24.078 Atomic orbital electron populations 1.23303 0.76184 1.03827 1.02686 1.86521 1.23564 1.33441 1.83938 1.23527 0.91524 0.81375 0.72102 1.90686 1.66886 1.36397 1.44820 1.22733 0.87595 1.01818 1.01256 0.85466 1.23454 0.96629 0.94405 1.01984 1.21889 0.81124 0.97284 0.95894 0.86064 1.48294 1.11934 1.07762 1.46595 1.22280 0.98755 0.89084 1.00060 1.21502 0.95606 0.99079 1.12723 1.20903 0.94216 0.91780 0.97117 1.20821 0.91952 0.96945 1.08087 1.22126 0.90856 0.96196 0.92017 1.19528 0.91473 0.90845 1.04281 1.24203 0.93596 0.96411 1.02492 1.15923 0.84641 0.83548 0.78116 1.90749 1.67999 1.34151 1.67881 1.90729 1.23822 1.88320 1.57535 1.21826 0.98255 0.94028 1.04338 1.20594 0.89854 0.93822 1.09373 1.24791 1.00370 1.06880 0.83488 1.86396 1.89055 1.39179 1.21080 0.93637 0.74834 0.84485 0.85294 1.41707 1.12297 1.12025 1.48315 1.78046 0.92112 1.17751 1.21416 1.23324 0.96977 1.00397 0.95424 0.91801 0.87974 0.91783 0.86562 0.89099 0.81410 0.83637 0.86674 0.81749 0.83737 0.87711 0.77133 1.17812 1.18519 0.75925 0.88756 0.87044 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.19 10.56 101.05 1.07 1.25 16 2 O -0.36 -2.88 10.57 -39.24 -0.41 -3.29 16 3 C 0.47 4.34 7.49 36.01 0.27 4.61 16 4 O -0.50 -6.00 15.65 -18.75 -0.29 -6.30 16 5 C -0.12 -0.89 3.83 -90.96 -0.35 -1.24 16 6 H 0.13 0.87 6.96 -51.93 -0.36 0.51 16 7 C -0.13 -1.21 7.20 -25.92 -0.19 -1.40 16 8 C 0.14 1.43 5.18 -67.12 -0.35 1.08 16 9 H 0.12 1.24 8.14 -51.93 -0.42 0.82 16 10 N -0.36 -4.86 3.79 -54.13 -0.21 -5.07 16 11 C 0.04 0.47 9.58 -17.27 -0.17 0.30 16 12 C -0.26 -3.43 10.78 -39.61 -0.43 -3.86 16 13 C 0.12 2.12 6.98 -82.99 -0.58 1.54 16 14 C -0.16 -2.79 9.79 -37.13 -0.36 -3.16 16 15 C 0.01 0.22 9.28 -37.58 -0.35 -0.13 16 16 C 0.05 1.15 6.96 -81.97 -0.57 0.58 16 17 C -0.16 -4.31 6.36 -102.62 -0.65 -4.97 16 18 C 0.54 18.42 8.02 33.97 0.27 18.69 16 19 O -0.69 -25.30 17.87 -20.71 -0.37 -25.67 16 20 O -0.69 -24.65 15.83 -20.70 -0.33 -24.98 16 21 C -0.16 -3.54 9.39 -37.56 -0.35 -3.89 16 22 C -0.02 -0.45 6.45 -81.82 -0.53 -0.98 16 23 C -0.04 -0.62 3.08 36.01 0.11 -0.51 16 24 O -0.55 -7.10 12.88 -35.23 -0.45 -7.55 16 25 Si 0.72 8.96 30.52 -169.99 -5.19 3.77 16 26 N -0.55 -10.03 5.86 -5.59 -0.03 -10.06 16 27 N -0.27 -4.98 12.15 33.29 0.40 -4.58 16 28 C -0.12 -0.81 6.87 -25.92 -0.18 -0.99 16 29 H 0.06 0.37 8.13 -51.93 -0.42 -0.06 16 30 H 0.10 0.30 8.14 -51.93 -0.42 -0.13 16 31 H 0.06 0.35 8.13 -51.93 -0.42 -0.07 16 32 H 0.12 1.09 7.44 -51.93 -0.39 0.71 16 33 H 0.09 1.02 8.14 -51.93 -0.42 0.59 16 34 H 0.17 1.15 6.63 -52.49 -0.35 0.80 16 35 H 0.15 1.54 8.06 -52.49 -0.42 1.12 16 36 H 0.12 1.69 6.99 -52.49 -0.37 1.32 16 37 H 0.17 4.29 6.07 -52.48 -0.32 3.97 16 38 H 0.15 3.02 6.17 -52.49 -0.32 2.70 16 39 H 0.11 1.39 7.96 -51.93 -0.41 0.97 16 40 H 0.38 3.72 8.70 45.56 0.40 4.12 16 41 H -0.25 -4.02 7.11 56.52 0.40 -3.62 16 42 H -0.26 -3.41 7.11 56.52 0.40 -3.00 16 43 H 0.40 6.04 7.91 -40.82 -0.32 5.71 16 44 H 0.09 0.52 6.96 -51.93 -0.36 0.15 16 45 H 0.11 0.60 8.10 -51.93 -0.42 0.18 16 LS Contribution 395.77 15.07 5.96 5.96 Total: -1.00 -44.81 395.77 -9.21 -54.02 By element: Atomic # 1 Polarization: 21.76 SS G_CDS: -4.96 Total: 16.80 kcal Atomic # 6 Polarization: 10.27 SS G_CDS: -3.33 Total: 6.94 kcal Atomic # 7 Polarization: -19.87 SS G_CDS: 0.17 Total: -19.71 kcal Atomic # 8 Polarization: -65.92 SS G_CDS: -1.86 Total: -67.78 kcal Atomic # 14 Polarization: 8.96 SS G_CDS: -5.19 Total: 3.77 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -44.81 -9.21 -54.02 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_6_16734034_15431852.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.359 kcal (2) G-P(sol) polarization free energy of solvation -44.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.170 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.206 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -54.017 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.375 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds