Wall clock time and date at job start Mon Mar 8 2021 13:31:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34229 * 117.00379 * 2 1 4 4 O 1.20826 * 119.99878 * 359.97438 * 3 2 1 5 5 C 1.50698 * 119.99789 * 180.02562 * 3 2 1 6 6 H 1.08991 * 112.91174 * 48.74396 * 5 3 2 7 7 C 1.53784 * 113.61063 * 179.97438 * 5 3 2 8 8 C 1.53786 * 87.17402 * 139.93519 * 7 5 3 9 9 H 1.08998 * 113.61642 * 220.06617 * 8 7 5 10 10 N 1.46497 * 113.61593 * 89.15253 * 8 7 5 11 11 N 1.40033 * 126.14590 * 294.33174 * 10 8 7 12 12 C 1.30957 * 108.85959 * 179.84904 * 11 10 8 13 13 C 1.39245 * 108.81563 * 0.40975 * 12 11 10 14 14 C 1.36758 * 126.13894 * 114.63256 * 10 8 7 15 15 C 1.46478 * 126.50992 * 0.02562 * 14 10 8 16 16 C 1.35262 * 119.99863 * 185.25650 * 15 14 10 17 17 C 1.41750 * 119.99957 * 185.22664 * 16 15 14 18 18 C 1.40072 * 126.33123 * 179.97438 * 17 16 15 19 19 C 1.46286 * 126.74612 * 359.95955 * 18 17 16 20 20 O 1.22486 * 120.00001 * 179.97438 * 19 18 17 21 21 O 1.22484 * 120.00031 * 0.02562 * 19 18 17 22 22 C 1.42088 * 106.50979 * 179.97438 * 18 17 16 23 23 C 1.34418 * 107.63123 * 0.02562 * 22 18 17 24 24 C 1.50701 * 125.31521 * 180.02562 * 23 22 18 25 25 O 1.42897 * 109.47056 * 119.97124 * 24 23 22 26 26 Si 1.86305 * 109.46733 * 359.97438 * 24 23 22 27 27 N 1.36583 * 126.33239 * 359.69603 * 17 16 15 28 28 C 1.53785 * 113.61134 * 277.48940 * 5 3 2 29 29 H 1.09004 * 109.47207 * 59.99948 * 1 2 3 30 30 H 1.08998 * 109.47592 * 180.02562 * 1 2 3 31 31 H 1.08998 * 109.47192 * 300.00390 * 1 2 3 32 32 H 1.08994 * 113.61514 * 254.52129 * 7 5 3 33 33 H 1.08995 * 113.61575 * 25.34666 * 7 5 3 34 34 H 1.08008 * 125.58875 * 180.14269 * 12 11 10 35 35 H 1.07994 * 126.18686 * 179.78103 * 13 12 11 36 36 H 1.08004 * 120.00074 * 5.24890 * 15 14 10 37 37 H 1.07997 * 119.99506 * 5.23165 * 16 15 14 38 38 H 1.07994 * 126.18384 * 179.97438 * 22 18 17 39 39 H 1.09000 * 109.46972 * 239.97700 * 24 23 22 40 40 H 0.96701 * 114.00105 * 179.97438 * 25 24 23 41 41 H 1.48503 * 110.00033 * 60.00233 * 26 24 23 42 42 H 1.48499 * 109.99579 * 181.31916 * 26 24 23 43 43 H 0.97007 * 125.42275 * 359.97438 * 27 17 16 44 44 H 1.08998 * 113.61614 * 334.57247 * 28 5 3 45 45 H 1.08999 * 113.61226 * 105.47464 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2747 -0.0006 6 1 4.0244 0.6359 -0.7556 7 6 4.1078 2.7140 -0.0011 8 6 5.1818 2.2294 0.9872 9 1 5.3954 2.9419 1.7839 10 7 6.3921 1.7217 0.3364 11 7 6.4798 0.5792 -0.4685 12 6 7.7168 0.4423 -0.8760 13 6 8.4810 1.4795 -0.3476 14 6 7.6404 2.2753 0.4105 15 6 8.0163 3.4811 1.1524 16 6 9.2716 3.9744 1.0498 17 6 9.6686 5.0742 1.8511 18 6 10.9279 5.6875 1.8534 19 6 12.0825 5.3187 1.0344 20 8 13.1308 5.9439 1.1368 21 8 12.0007 4.3852 0.2456 22 6 10.8636 6.7381 2.8079 23 6 9.6269 6.7345 3.3346 24 6 9.1264 7.6876 4.3892 25 8 8.0106 8.4198 3.8786 26 14 10.4877 8.8726 4.8516 27 7 8.8923 5.7353 2.7598 28 6 4.1916 1.1231 1.3962 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3633 0.5139 0.8899 32 1 4.5107 3.0286 -0.9638 33 1 3.4170 3.4406 0.4265 34 1 8.0848 -0.3481 -1.5134 35 1 9.5384 1.6352 -0.5022 36 1 7.2912 3.9763 1.7813 37 1 9.9713 3.5303 0.3573 38 1 11.6639 7.4163 3.0644 39 1 8.8193 7.1252 5.2709 40 1 7.6359 9.0537 4.5055 41 1 10.9154 9.6456 3.6579 42 1 10.0168 9.7975 5.9136 43 1 7.9673 5.5277 2.9658 44 1 3.5243 1.4144 2.2073 45 1 4.6620 0.1538 1.5612 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_6_16734034_15431928.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:31:41 Heat of formation + Delta-G solvation = -77.961157 kcal Electronic energy + Delta-G solvation = -32702.857740 eV Core-core repulsion = 27961.137439 eV Total energy + Delta-G solvation = -4741.720301 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.132 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -41.42995 -40.72987 -40.52791 -38.45979 -36.97063 -36.61786 -36.39392 -34.28832 -32.09414 -31.60895 -30.46185 -30.05304 -28.65554 -28.12041 -26.30890 -26.17902 -24.95260 -22.77880 -22.54628 -21.10456 -20.74095 -19.93793 -19.64129 -18.43216 -18.06162 -17.62389 -17.34647 -17.15255 -16.72782 -16.52211 -16.27313 -15.21789 -14.98017 -14.85925 -14.58963 -14.18583 -14.02681 -13.80107 -13.67030 -13.50150 -13.35962 -13.18271 -13.06857 -12.87725 -12.79960 -12.67754 -12.49604 -12.43786 -12.37493 -12.06158 -11.86251 -11.40223 -11.18408 -11.14935 -11.02775 -10.98153 -10.78858 -10.67688 -10.48085 -10.31264 -9.61675 -8.93644 -8.31887 -8.13140 -7.55130 -7.42707 -7.24706 -6.80282 -3.87171 1.00880 1.83211 2.22929 2.34063 2.37135 2.44071 2.52654 2.93916 3.05169 3.20545 3.69119 3.79819 3.82619 4.03498 4.24071 4.32592 4.40236 4.71992 4.76142 4.79053 4.80758 4.98142 5.00123 5.07543 5.14639 5.17935 5.23557 5.30843 5.42281 5.48066 5.59334 5.75544 5.81248 5.92711 5.98373 6.02275 6.06541 6.17448 6.21007 6.33710 6.67981 6.77002 6.88424 6.90692 7.02356 7.22849 7.32399 7.40634 7.57840 7.65936 7.89259 7.98313 10.55953 11.00574 Molecular weight = 373.13amu Principal moments of inertia in cm(-1) A = 0.010546 B = 0.002238 C = 0.001883 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2654.481190 B =12510.752283 C =14865.758718 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.509 6.509 5 C -0.104 4.104 6 H 0.139 0.861 7 C -0.127 4.127 8 C 0.142 3.858 9 H 0.117 0.883 10 N -0.366 5.366 11 N -0.310 5.310 12 C 0.052 3.948 13 C -0.266 4.266 14 C 0.148 3.852 15 C -0.189 4.189 16 C 0.023 3.977 17 C 0.040 3.960 18 C -0.144 4.144 19 C 0.541 3.459 20 O -0.687 6.687 21 O -0.689 6.689 22 C -0.153 4.153 23 C 0.027 3.973 24 C -0.052 4.052 25 O -0.543 6.543 26 Si 0.709 3.291 27 N -0.540 5.540 28 C -0.118 4.118 29 H 0.062 0.938 30 H 0.101 0.899 31 H 0.062 0.938 32 H 0.086 0.914 33 H 0.111 0.889 34 H 0.181 0.819 35 H 0.156 0.844 36 H 0.105 0.895 37 H 0.167 0.833 38 H 0.146 0.854 39 H 0.069 0.931 40 H 0.375 0.625 41 H -0.250 1.250 42 H -0.265 1.265 43 H 0.406 0.594 44 H 0.100 0.900 45 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.725 -5.935 7.379 22.785 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.272 6.272 3 C 0.315 3.685 4 O -0.396 6.396 5 C -0.123 4.123 6 H 0.157 0.843 7 C -0.166 4.166 8 C 0.038 3.962 9 H 0.135 0.865 10 N -0.149 5.149 11 N -0.131 5.131 12 C -0.132 4.132 13 C -0.294 4.294 14 C 0.024 3.976 15 C -0.210 4.210 16 C 0.002 3.998 17 C -0.071 4.071 18 C -0.153 4.153 19 C 0.377 3.623 20 O -0.603 6.603 21 O -0.605 6.605 22 C -0.177 4.177 23 C -0.087 4.087 24 C -0.161 4.161 25 O -0.350 6.350 26 Si 0.609 3.391 27 N -0.137 5.137 28 C -0.156 4.156 29 H 0.081 0.919 30 H 0.120 0.880 31 H 0.081 0.919 32 H 0.105 0.895 33 H 0.129 0.871 34 H 0.198 0.802 35 H 0.174 0.826 36 H 0.123 0.877 37 H 0.184 0.816 38 H 0.163 0.837 39 H 0.087 0.913 40 H 0.222 0.778 41 H -0.174 1.174 42 H -0.191 1.191 43 H 0.242 0.758 44 H 0.118 0.882 45 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -21.690 -5.783 6.682 23.421 hybrid contribution -1.480 0.824 0.363 1.733 sum -23.171 -4.959 7.045 24.720 Atomic orbital electron populations 1.23281 0.76487 1.03746 1.02516 1.86551 1.23312 1.33522 1.83846 1.23748 0.91811 0.81222 0.71680 1.90656 1.67084 1.36448 1.45442 1.22628 0.86635 1.01072 1.01949 0.84314 1.23420 0.96657 0.95039 1.01440 1.21906 0.82441 0.96605 0.95256 0.86500 1.48485 1.05769 1.20847 1.39839 1.77078 1.20696 1.03076 1.12218 1.23608 0.90653 0.99255 0.99660 1.21940 1.01451 0.98873 1.07148 1.20007 0.84515 0.94969 0.98107 1.20731 0.97325 0.97120 1.05823 1.21120 0.95135 0.90140 0.93367 1.18441 0.91985 0.99064 0.97597 1.23199 0.96489 0.95817 0.99830 1.15924 0.83501 0.82408 0.80445 1.90765 1.32430 1.61393 1.75674 1.90697 1.87583 1.37245 1.45023 1.20807 0.95233 1.02001 0.99697 1.19516 0.92775 0.94324 1.02036 1.24520 0.97348 0.98191 0.96028 1.86630 1.47171 1.56749 1.44406 0.94037 0.84020 0.79562 0.81491 1.41874 1.12516 1.26519 1.32779 1.23198 0.96746 1.00725 0.94963 0.91895 0.88035 0.91932 0.89524 0.87064 0.80182 0.82639 0.87705 0.81591 0.83653 0.91323 0.77807 1.17393 1.19102 0.75752 0.88197 0.88666 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.23 10.56 101.05 1.07 1.30 16 2 O -0.36 -3.56 10.56 -39.25 -0.41 -3.97 16 3 C 0.47 5.20 7.48 36.00 0.27 5.47 16 4 O -0.51 -6.69 15.65 -18.75 -0.29 -6.98 16 5 C -0.10 -1.06 3.90 -90.96 -0.35 -1.42 16 6 H 0.14 1.54 7.19 -51.93 -0.37 1.17 16 7 C -0.13 -1.33 7.20 -25.91 -0.19 -1.51 16 8 C 0.14 1.52 4.72 -67.00 -0.32 1.21 16 9 H 0.12 1.08 7.21 -51.93 -0.37 0.70 16 10 N -0.37 -5.10 3.76 -49.98 -0.19 -5.29 16 11 N -0.31 -4.43 10.94 30.52 0.33 -4.10 16 12 C 0.05 0.73 11.96 -17.55 -0.21 0.52 16 13 C -0.27 -4.27 10.20 -39.16 -0.40 -4.67 16 14 C 0.15 2.37 6.91 -82.30 -0.57 1.80 16 15 C -0.19 -3.07 9.39 -37.32 -0.35 -3.42 16 16 C 0.02 0.47 9.00 -39.30 -0.35 0.12 16 17 C 0.04 0.87 6.78 -83.72 -0.57 0.31 16 18 C -0.14 -3.78 6.19 -104.50 -0.65 -4.42 16 19 C 0.54 17.62 8.02 33.96 0.27 17.89 16 20 O -0.69 -24.32 17.83 -20.70 -0.37 -24.69 16 21 O -0.69 -23.31 15.75 -20.70 -0.33 -23.63 16 22 C -0.15 -3.36 9.13 -39.46 -0.36 -3.72 16 23 C 0.03 0.48 6.50 -81.77 -0.53 -0.05 16 24 C -0.05 -0.69 3.07 36.01 0.11 -0.57 16 25 O -0.54 -7.07 12.86 -35.23 -0.45 -7.53 16 26 Si 0.71 8.55 30.51 -169.99 -5.19 3.37 16 27 N -0.54 -9.59 5.91 -6.69 -0.04 -9.63 16 28 C -0.12 -1.09 7.17 -25.80 -0.18 -1.27 16 29 H 0.06 0.43 8.13 -51.93 -0.42 0.01 16 30 H 0.10 0.42 8.14 -51.93 -0.42 0.00 16 31 H 0.06 0.41 8.13 -51.93 -0.42 -0.01 16 32 H 0.09 1.01 8.14 -51.93 -0.42 0.58 16 33 H 0.11 1.09 7.43 -51.93 -0.39 0.70 16 34 H 0.18 1.91 8.06 -52.48 -0.42 1.49 16 35 H 0.16 2.58 7.33 -52.49 -0.38 2.20 16 36 H 0.11 1.43 6.16 -52.48 -0.32 1.10 16 37 H 0.17 3.80 5.18 -52.49 -0.27 3.53 16 38 H 0.15 3.05 6.12 -52.49 -0.32 2.73 16 39 H 0.07 0.73 7.96 -51.93 -0.41 0.31 16 40 H 0.37 2.96 8.74 45.56 0.40 3.36 16 41 H -0.25 -4.07 7.11 56.52 0.40 -3.67 16 42 H -0.27 -3.07 7.11 56.52 0.40 -2.66 16 43 H 0.41 5.77 7.85 -40.82 -0.32 5.45 16 44 H 0.10 0.74 8.09 -51.93 -0.42 0.32 16 45 H 0.09 0.95 8.14 -51.93 -0.42 0.52 16 LS Contribution 394.18 15.07 5.94 5.94 Total: -1.00 -41.88 394.18 -9.23 -51.11 By element: Atomic # 1 Polarization: 22.77 SS G_CDS: -4.92 Total: 17.85 kcal Atomic # 6 Polarization: 10.86 SS G_CDS: -3.31 Total: 7.54 kcal Atomic # 7 Polarization: -19.12 SS G_CDS: 0.11 Total: -19.01 kcal Atomic # 8 Polarization: -64.94 SS G_CDS: -1.86 Total: -66.80 kcal Atomic # 14 Polarization: 8.55 SS G_CDS: -5.19 Total: 3.37 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -41.88 -9.23 -51.11 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_6_16734034_15431928.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.850 kcal (2) G-P(sol) polarization free energy of solvation -41.880 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.729 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.232 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -51.112 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.961 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds