Wall clock time and date at job start Mon Mar 8 2021 15:51:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34223 * 116.99816 * 2 1 4 4 O 1.20819 * 120.00412 * 0.02562 * 3 2 1 5 5 C 1.50707 * 119.99826 * 180.02562 * 3 2 1 6 6 H 1.09001 * 112.84819 * 311.19777 * 5 3 2 7 7 C 1.53777 * 113.61509 * 82.50312 * 5 3 2 8 8 C 1.53773 * 87.08257 * 139.98166 * 7 5 3 9 9 H 1.09007 * 113.69018 * 220.01168 * 8 7 5 10 10 N 1.46495 * 113.61596 * 89.11808 * 8 7 5 11 11 C 1.35103 * 125.89518 * 347.52637 * 10 8 7 12 12 C 1.34987 * 108.06262 * 179.72665 * 11 10 8 13 13 C 1.41167 * 107.83678 * 0.43173 * 12 11 10 14 14 C 1.47437 * 126.08906 * 179.82644 * 13 12 11 15 15 C 1.34222 * 120.00126 * 179.71543 * 14 13 12 16 16 C 1.47399 * 119.99589 * 180.02562 * 15 14 13 17 17 N 1.31966 * 126.01192 * 0.04354 * 16 15 14 18 18 N 1.40083 * 108.10303 * 179.97438 * 17 16 15 19 19 C 1.40092 * 125.95671 * 180.02562 * 18 17 16 20 20 C 1.38870 * 120.05056 * 179.69999 * 19 18 17 21 21 C 1.38104 * 119.93773 * 179.76758 * 20 19 18 22 22 C 1.38393 * 120.05550 * 0.50610 * 21 20 19 23 23 Cl 1.73604 * 119.94257 * 179.76701 * 22 21 20 24 24 C 1.38395 * 120.11697 * 359.74356 * 22 21 20 25 25 C 1.38099 * 120.05156 * 0.02562 * 24 22 21 26 26 C 1.35925 * 108.08105 * 359.75779 * 18 17 16 27 27 C 1.34978 * 107.94458 * 0.39253 * 26 18 17 28 28 C 1.50699 * 126.05293 * 179.87573 * 27 26 18 29 29 O 1.42903 * 109.47152 * 254.69052 * 28 27 26 30 30 Si 1.86305 * 109.47184 * 14.68524 * 28 27 26 31 31 N 1.31934 * 107.82878 * 359.56707 * 13 12 11 32 32 C 1.53775 * 113.61437 * 180.02562 * 5 3 2 33 33 H 1.08994 * 109.47199 * 59.99615 * 1 2 3 34 34 H 1.08997 * 109.47085 * 179.97438 * 1 2 3 35 35 H 1.08998 * 109.46862 * 299.99865 * 1 2 3 36 36 H 1.09009 * 113.61678 * 25.43198 * 7 5 3 37 37 H 1.08999 * 113.61934 * 254.53606 * 7 5 3 38 38 H 1.07996 * 125.96493 * 0.02562 * 11 10 8 39 39 H 1.07998 * 126.08154 * 180.26109 * 12 11 10 40 40 H 1.08004 * 119.99307 * 359.71783 * 14 13 12 41 41 H 1.07994 * 120.00471 * 0.02562 * 15 14 13 42 42 H 1.07999 * 120.03239 * 359.97438 * 20 19 18 43 43 H 1.08003 * 119.97232 * 180.23106 * 21 20 19 44 44 H 1.07995 * 119.97318 * 179.97438 * 24 22 21 45 45 H 1.08002 * 120.02609 * 180.02562 * 25 24 22 46 46 H 1.07995 * 126.02830 * 180.27800 * 26 18 17 47 47 H 1.08997 * 109.47198 * 134.68730 * 28 27 26 48 48 H 0.96700 * 114.00311 * 180.02562 * 29 28 27 49 49 H 1.48499 * 109.99670 * 178.68093 * 30 28 27 50 50 H 1.48497 * 110.00233 * 300.00062 * 30 28 27 51 51 H 1.09002 * 113.61746 * 105.47196 * 32 5 3 52 52 H 1.08996 * 113.61578 * 334.57046 * 32 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0239 0.6361 0.7549 7 6 4.1906 1.1238 -1.3978 8 6 5.1806 2.2269 -0.9886 9 1 5.3964 2.9392 -1.7851 10 7 6.3902 1.7179 -0.3376 11 6 6.5730 0.4607 0.1222 12 6 7.8143 0.3834 0.6471 13 6 8.4200 1.6516 0.5136 14 6 9.7777 2.0166 0.9576 15 6 10.2347 3.2636 0.7634 16 6 11.5923 3.6282 1.2069 17 7 12.4550 2.8273 1.8033 18 7 13.6232 3.5576 2.0573 19 6 14.7801 3.0690 2.6780 20 6 15.8749 3.9030 2.8634 21 6 17.0125 3.4202 3.4799 22 6 17.0658 2.1037 3.9033 23 17 18.4996 1.4982 4.6724 24 6 15.9780 1.2691 3.7150 25 6 14.8364 1.7483 3.1033 26 6 13.4404 4.8213 1.5911 27 6 12.1986 4.8959 1.0676 28 6 11.5725 6.1144 0.4397 29 8 10.6102 6.6716 1.3374 30 14 12.8943 7.3782 0.0837 31 7 7.5569 2.4505 -0.0843 32 6 4.1077 2.7141 0.0001 33 1 -0.3633 0.5139 -0.8899 34 1 -0.3633 -1.0276 -0.0005 35 1 -0.3633 0.5138 0.8900 36 1 3.5226 1.4153 -2.2084 37 1 4.6608 0.1545 -1.5636 38 1 5.8537 -0.3433 0.0736 39 1 8.2630 -0.4920 1.0927 40 1 10.4044 1.2805 1.4392 41 1 9.6079 3.9997 0.2823 42 1 15.8356 4.9291 2.5289 43 1 17.8629 4.0694 3.6278 44 1 16.0223 0.2420 4.0459 45 1 13.9876 1.0968 2.9570 46 1 14.1611 5.6245 1.6339 47 1 11.0803 5.8315 -0.4907 48 1 10.1661 7.4606 0.9978 49 1 12.2942 8.5718 -0.5647 50 1 13.5729 7.7723 1.3444 51 1 4.5113 3.0284 0.9627 52 1 3.4171 3.4406 -0.4279 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_6_7941758_15431852.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:51:51 Heat of formation + Delta-G solvation = 128.671892 kcal Electronic energy + Delta-G solvation = -38137.018321 eV Core-core repulsion = 32906.987583 eV Total energy + Delta-G solvation = -5230.030737 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 441.129 amu Computer time = 2.15 seconds Orbital eigenvalues (eV) -42.75945 -42.61053 -41.61100 -40.27585 -39.45230 -37.90633 -37.51235 -37.48586 -35.98361 -34.07241 -32.68320 -32.08633 -31.62357 -31.05735 -29.88667 -29.19738 -27.19054 -27.02080 -26.62896 -25.42786 -24.03732 -23.58117 -22.82307 -21.93082 -21.66899 -20.71077 -20.56603 -19.57352 -19.36067 -19.02779 -18.51185 -18.06137 -17.80160 -17.64644 -17.51915 -16.57080 -16.48800 -16.21119 -16.08003 -16.01549 -15.69712 -15.66322 -15.32637 -15.13344 -14.94852 -14.74524 -14.54858 -14.52062 -14.36712 -14.09210 -13.86511 -13.68303 -13.60680 -13.47032 -13.38887 -13.27670 -13.08332 -12.93290 -12.90166 -12.78728 -12.58788 -12.34440 -12.20242 -11.91279 -11.89816 -11.86066 -11.81959 -11.70157 -11.59293 -11.47180 -10.92704 -10.37076 -10.27426 -10.25095 -9.87294 -9.44888 -8.85521 -4.89298 -0.58664 0.01155 0.10171 0.90289 0.98207 1.00547 1.05919 1.18260 1.33985 1.36100 1.62719 1.65783 1.71062 1.96758 2.41642 2.50172 2.92187 3.06971 3.14672 3.31487 3.37555 3.58696 3.59936 3.65921 3.72543 3.76417 3.80123 3.96176 3.98131 4.03489 4.07387 4.18074 4.24364 4.27256 4.27514 4.30460 4.35553 4.42548 4.47776 4.50940 4.61925 4.67197 4.69790 4.74249 4.75364 4.80216 4.80585 4.82300 4.92976 4.96344 4.98554 5.09088 5.29518 5.31293 5.40811 5.42554 5.46714 5.61359 5.95212 6.08228 6.37374 6.59867 6.65567 6.66187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.360 6.360 3 C 0.472 3.528 4 O -0.537 6.537 5 C -0.111 4.111 6 H 0.142 0.858 7 C -0.106 4.106 8 C 0.133 3.867 9 H 0.125 0.875 10 N -0.354 5.354 11 C 0.059 3.941 12 C -0.265 4.265 13 C 0.079 3.921 14 C -0.043 4.043 15 C -0.062 4.062 16 C 0.122 3.878 17 N -0.298 5.298 18 N -0.323 5.323 19 C 0.148 3.852 20 C -0.125 4.125 21 C -0.078 4.078 22 C -0.054 4.054 23 Cl -0.065 7.065 24 C -0.085 4.085 25 C -0.116 4.116 26 C 0.066 3.934 27 C -0.205 4.205 28 C -0.054 4.054 29 O -0.559 6.559 30 Si 0.768 3.232 31 N -0.309 5.309 32 C -0.126 4.126 33 H 0.063 0.937 34 H 0.129 0.871 35 H 0.058 0.942 36 H 0.125 0.875 37 H 0.115 0.885 38 H 0.211 0.789 39 H 0.167 0.833 40 H 0.143 0.857 41 H 0.137 0.863 42 H 0.165 0.835 43 H 0.166 0.834 44 H 0.155 0.845 45 H 0.142 0.858 46 H 0.211 0.789 47 H 0.086 0.914 48 H 0.393 0.607 49 H -0.284 1.284 50 H -0.279 1.279 51 H 0.074 0.926 52 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.360 -2.376 -4.382 4.998 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.276 6.276 3 C 0.316 3.684 4 O -0.426 6.426 5 C -0.129 4.129 6 H 0.159 0.841 7 C -0.144 4.144 8 C 0.031 3.969 9 H 0.143 0.857 10 N -0.137 5.137 11 C -0.086 4.086 12 C -0.294 4.294 13 C -0.083 4.083 14 C -0.066 4.066 15 C -0.086 4.086 16 C -0.042 4.042 17 N -0.119 5.119 18 N -0.098 5.098 19 C 0.056 3.944 20 C -0.146 4.146 21 C -0.097 4.097 22 C -0.082 4.082 23 Cl -0.036 7.036 24 C -0.104 4.104 25 C -0.136 4.136 26 C -0.075 4.075 27 C -0.215 4.215 28 C -0.162 4.162 29 O -0.369 6.369 30 Si 0.671 3.329 31 N -0.132 5.132 32 C -0.165 4.165 33 H 0.082 0.918 34 H 0.148 0.852 35 H 0.077 0.923 36 H 0.143 0.857 37 H 0.134 0.866 38 H 0.228 0.772 39 H 0.185 0.815 40 H 0.161 0.839 41 H 0.155 0.845 42 H 0.183 0.817 43 H 0.184 0.816 44 H 0.173 0.827 45 H 0.160 0.840 46 H 0.228 0.772 47 H 0.104 0.896 48 H 0.243 0.757 49 H -0.210 1.210 50 H -0.206 1.206 51 H 0.092 0.908 52 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 0.656 -1.817 -3.843 4.301 hybrid contribution -1.565 0.532 0.722 1.804 sum -0.909 -1.285 -3.121 3.495 Atomic orbital electron populations 1.23541 0.74959 1.05691 1.02454 1.86512 1.24772 1.32868 1.83400 1.23888 0.92271 0.81125 0.71089 1.90684 1.67823 1.37518 1.46593 1.22782 0.86459 1.00997 1.02696 0.84051 1.23333 0.95757 1.00454 0.94874 1.22153 0.80298 0.98764 0.95670 0.85693 1.48463 1.11298 1.08196 1.45730 1.23001 0.98922 0.89090 0.97555 1.21891 0.96055 0.98862 1.12554 1.21109 0.94471 0.93472 0.99257 1.21381 0.90588 0.96700 0.97938 1.21188 0.90110 0.97108 1.00158 1.21142 0.94419 0.92056 0.96546 1.77701 0.92789 1.19223 1.22168 1.45824 1.10893 1.08408 1.44687 1.17879 0.84206 0.94678 0.97660 1.21055 0.90889 1.01106 1.01505 1.21156 0.98738 0.93734 0.96115 1.21166 0.89770 0.95247 1.01980 1.98403 1.37503 1.87976 1.79737 1.21121 0.90672 1.01051 0.97597 1.20901 0.99390 0.93834 0.99515 1.22877 0.98896 0.88615 0.97099 1.19730 0.94769 0.95485 1.11487 1.24362 0.99425 0.98491 0.93956 1.86583 1.56203 1.48064 1.46015 0.94266 0.80971 0.76315 0.81390 1.77631 0.93600 1.19952 1.22059 1.23394 0.96680 0.95475 1.00918 0.91808 0.85243 0.92300 0.85730 0.86640 0.77207 0.81506 0.83913 0.84486 0.81710 0.81609 0.82698 0.83989 0.77240 0.89587 0.75701 1.21028 1.20557 0.90763 0.86870 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.08 10.56 113.37 1.20 1.12 16 2 O -0.36 -0.10 10.57 -51.35 -0.54 -0.65 16 3 C 0.47 0.78 7.48 71.24 0.53 1.31 16 4 O -0.54 -4.54 15.65 21.98 0.34 -4.19 16 5 C -0.11 0.47 3.83 -11.01 -0.04 0.43 16 6 H 0.14 -0.98 6.97 -2.39 -0.02 -1.00 16 7 C -0.11 0.86 6.87 31.12 0.21 1.07 16 8 C 0.13 -0.43 5.18 45.53 0.24 -0.20 16 9 H 0.13 -0.49 8.14 -2.38 -0.02 -0.51 16 10 N -0.35 -0.54 3.79 -325.09 -1.23 -1.77 16 11 C 0.06 -0.10 9.59 83.44 0.80 0.70 16 12 C -0.26 -0.51 10.77 22.24 0.24 -0.27 16 13 C 0.08 0.54 6.98 42.27 0.30 0.83 16 14 C -0.04 -0.28 9.77 23.78 0.23 -0.05 16 15 C -0.06 -0.47 9.55 23.77 0.23 -0.24 16 16 C 0.12 1.03 6.97 42.27 0.29 1.33 16 17 N -0.30 -2.75 11.42 -48.52 -0.55 -3.31 16 18 N -0.32 -1.84 3.81 -187.53 -0.72 -2.56 16 19 C 0.15 0.44 6.69 38.12 0.25 0.69 16 20 C -0.12 0.26 9.46 22.39 0.21 0.47 16 21 C -0.08 0.20 9.82 22.27 0.22 0.41 16 22 C -0.05 -0.01 6.32 22.34 0.14 0.13 16 23 Cl -0.07 -0.07 28.95 -2.72 -0.08 -0.14 16 24 C -0.09 -0.03 9.82 22.27 0.22 0.18 16 25 C -0.12 -0.32 9.66 22.39 0.22 -0.10 16 26 C 0.07 0.16 9.33 83.31 0.78 0.93 16 27 C -0.20 -1.02 5.44 -19.89 -0.11 -1.12 16 28 C -0.05 -0.05 2.78 71.24 0.20 0.15 16 29 O -0.56 -2.28 12.86 -148.98 -1.92 -4.19 16 30 Si 0.77 -2.56 30.77 68.60 2.11 -0.45 16 31 N -0.31 -2.44 12.14 -48.53 -0.59 -3.03 16 32 C -0.13 0.21 7.21 31.13 0.22 0.43 16 33 H 0.06 -0.16 8.13 -2.39 -0.02 -0.18 16 34 H 0.13 -1.07 8.14 -2.39 -0.02 -1.09 16 35 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 36 H 0.12 -1.19 8.09 -2.38 -0.02 -1.21 16 37 H 0.12 -1.31 6.96 -2.39 -0.02 -1.33 16 38 H 0.21 -2.12 6.63 -2.91 -0.02 -2.14 16 39 H 0.17 -0.35 8.06 -2.91 -0.02 -0.37 16 40 H 0.14 0.72 7.72 -2.91 -0.02 0.70 16 41 H 0.14 1.06 7.71 -2.91 -0.02 1.04 16 42 H 0.17 -1.28 6.73 -2.91 -0.02 -1.30 16 43 H 0.17 -1.15 8.06 -2.91 -0.02 -1.17 16 44 H 0.16 -0.41 8.06 -2.91 -0.02 -0.43 16 45 H 0.14 0.48 7.69 -2.91 -0.02 0.45 16 46 H 0.21 -1.04 5.32 -2.91 -0.02 -1.06 16 47 H 0.09 -0.13 7.96 -2.39 -0.02 -0.15 16 48 H 0.39 -1.60 8.74 -74.06 -0.65 -2.25 16 49 H -0.28 -0.32 7.11 99.48 0.71 0.38 16 50 H -0.28 -0.27 7.04 99.48 0.70 0.43 16 51 H 0.07 0.12 8.14 -2.39 -0.02 0.10 16 52 H 0.11 -0.06 7.43 -2.39 -0.02 -0.08 16 Total: 0.00 -27.14 461.01 3.79 -23.35 By element: Atomic # 1 Polarization: -11.65 SS G_CDS: 0.38 Total: -11.26 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: 6.58 Total: 8.20 kcal Atomic # 7 Polarization: -7.58 SS G_CDS: -3.09 Total: -10.67 kcal Atomic # 8 Polarization: -6.92 SS G_CDS: -2.11 Total: -9.03 kcal Atomic # 14 Polarization: -2.56 SS G_CDS: 2.11 Total: -0.45 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -0.08 Total: -0.14 kcal Total: -27.14 3.79 -23.35 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_6_7941758_15431852.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 152.025 kcal (2) G-P(sol) polarization free energy of solvation -27.140 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 124.884 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.788 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.353 kcal (6) G-S(sol) free energy of system = (1) + (5) 128.672 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.15 seconds