Wall clock time and date at job start Mon Mar 8 2021 15:51:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34228 * 116.99742 * 2 1 4 4 O 1.20824 * 120.00038 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99565 * 179.97438 * 3 2 1 6 6 H 1.08996 * 112.85163 * 311.19762 * 5 3 2 7 7 C 1.54055 * 113.69759 * 82.47194 * 5 3 2 8 8 C 1.53770 * 86.98926 * 139.98573 * 7 5 3 9 9 H 1.09005 * 113.61855 * 219.97832 * 8 7 5 10 10 N 1.46503 * 113.61685 * 89.16075 * 8 7 5 11 11 N 1.40038 * 126.12663 * 326.46267 * 10 8 7 12 12 C 1.30911 * 108.82732 * 180.26627 * 11 10 8 13 13 C 1.39343 * 108.76986 * 359.78273 * 12 11 10 14 14 C 1.36625 * 126.13145 * 146.34983 * 10 8 7 15 15 C 1.46776 * 126.48552 * 0.02562 * 14 10 8 16 16 C 1.34559 * 120.00128 * 185.01910 * 15 14 10 17 17 C 1.47282 * 120.00249 * 174.86957 * 16 15 14 18 18 N 1.32022 * 126.01869 * 0.33034 * 17 16 15 19 19 N 1.40076 * 108.09644 * 180.15666 * 18 17 16 20 20 C 1.40085 * 125.95391 * 179.81950 * 19 18 17 21 21 C 1.38866 * 120.05512 * 359.69155 * 20 19 18 22 22 C 1.38104 * 119.94276 * 180.02562 * 21 20 19 23 23 C 1.38398 * 120.05433 * 0.27260 * 22 21 20 24 24 Cl 1.73596 * 119.94111 * 179.72616 * 23 22 21 25 25 C 1.38394 * 120.11107 * 359.45487 * 23 22 21 26 26 C 1.38096 * 120.06151 * 0.54344 * 25 23 22 27 27 C 1.35940 * 108.08780 * 359.55653 * 19 18 17 28 28 C 1.34954 * 107.96224 * 0.26489 * 27 19 18 29 29 C 1.50697 * 126.05630 * 180.02562 * 28 27 19 30 30 O 1.42901 * 109.47252 * 254.97342 * 29 28 27 31 31 Si 1.86302 * 109.47229 * 14.97483 * 29 28 27 32 32 C 1.53781 * 113.61119 * 179.97438 * 5 3 2 33 33 H 1.08999 * 109.46828 * 59.99991 * 1 2 3 34 34 H 1.09008 * 109.46972 * 179.97438 * 1 2 3 35 35 H 1.09002 * 109.47181 * 299.99803 * 1 2 3 36 36 H 1.09003 * 113.60893 * 25.47740 * 7 5 3 37 37 H 1.09004 * 113.69011 * 254.50841 * 7 5 3 38 38 H 1.08007 * 125.61254 * 179.75289 * 12 11 10 39 39 H 1.08002 * 126.18520 * 180.02562 * 13 12 11 40 40 H 1.08004 * 120.00439 * 5.02220 * 15 14 10 41 41 H 1.08005 * 119.99867 * 354.87184 * 16 15 14 42 42 H 1.08000 * 120.03428 * 0.02562 * 21 20 19 43 43 H 1.07992 * 119.97274 * 180.02562 * 22 21 20 44 44 H 1.08003 * 119.97313 * 180.27691 * 25 23 22 45 45 H 1.07997 * 120.03181 * 179.74833 * 26 25 23 46 46 H 1.08000 * 126.01769 * 180.29282 * 27 19 18 47 47 H 1.09005 * 109.46774 * 134.97199 * 29 28 27 48 48 H 0.96701 * 114.00091 * 179.97438 * 30 29 28 49 49 H 1.48507 * 109.99838 * 299.99921 * 31 29 28 50 50 H 1.48497 * 110.00116 * 61.31745 * 31 29 28 51 51 H 1.08996 * 113.61733 * 105.38936 * 32 5 3 52 52 H 1.09000 * 113.69324 * 334.49299 * 32 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0233 0.6365 0.7567 7 6 4.1949 1.1224 -1.3976 8 6 5.1828 2.2261 -0.9849 9 1 5.4003 2.9377 -1.7815 10 7 6.3910 1.7177 -0.3307 11 7 6.4687 0.5942 0.5016 12 6 7.7060 0.4518 0.9048 13 6 8.4786 1.4695 0.3488 14 6 7.6443 2.2534 -0.4251 15 6 8.0301 3.4407 -1.1969 16 6 9.3248 3.7977 -1.2800 17 6 9.7251 4.9207 -2.1449 18 7 8.9164 5.6595 -2.8819 19 7 9.6906 6.6141 -3.5538 20 6 9.2101 7.5874 -4.4394 21 6 7.8526 7.6603 -4.7229 22 6 7.3815 8.6204 -5.5966 23 6 8.2618 9.5058 -6.1939 24 17 7.6672 10.7069 -7.2973 25 6 9.6143 9.4387 -5.9087 26 6 10.0906 8.4806 -5.0357 27 6 10.9888 6.4351 -3.1922 28 6 11.0409 5.4010 -2.3267 29 6 12.2828 4.8557 -1.6700 30 8 12.6464 3.6206 -2.2901 31 14 13.6745 6.0796 -1.8606 32 6 4.1077 2.7142 -0.0001 33 1 -0.3633 0.5138 -0.8900 34 1 -0.3633 -1.0277 -0.0005 35 1 -0.3634 0.5138 0.8900 36 1 3.5288 1.4138 -2.2098 37 1 4.6664 0.1535 -1.5626 38 1 8.0682 -0.3261 1.5606 39 1 9.5382 1.6185 0.4958 40 1 7.2749 4.0280 -1.6981 41 1 10.0705 3.2608 -0.7125 42 1 7.1658 6.9668 -4.2605 43 1 6.3259 8.6778 -5.8171 44 1 10.2987 10.1336 -6.3726 45 1 11.1467 8.4261 -4.8166 46 1 11.8301 7.0181 -3.5366 47 1 12.0896 4.6873 -0.6106 48 1 13.4395 3.2118 -1.9172 49 1 13.9478 6.3178 -3.3007 50 1 13.3217 7.3579 -1.1923 51 1 4.5091 3.0302 0.9627 52 1 3.4189 3.4410 -0.4307 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_6_7941758_15431928.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:51:57 Heat of formation + Delta-G solvation = 126.708575 kcal Electronic energy + Delta-G solvation = -39027.080796 eV Core-core repulsion = 33796.964922 eV Total energy + Delta-G solvation = -5230.115873 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 441.129 amu Computer time = 2.09 seconds Orbital eigenvalues (eV) -42.89383 -42.43683 -41.60741 -40.40216 -39.35904 -37.80802 -37.49497 -37.48502 -36.13829 -34.14603 -32.81489 -32.60848 -31.96528 -30.80841 -29.39334 -29.18976 -27.14894 -26.98911 -26.66351 -25.47002 -24.15108 -23.57920 -23.21736 -22.13051 -21.69345 -21.29984 -20.12811 -19.48640 -19.45176 -18.95907 -18.28288 -18.12023 -17.87306 -17.62170 -17.53242 -16.63796 -16.58579 -16.30191 -16.12643 -15.99174 -15.59850 -15.51563 -15.34355 -15.23132 -15.02364 -14.87287 -14.65863 -14.63231 -14.40294 -14.31145 -14.11659 -13.74390 -13.65724 -13.52111 -13.49578 -13.19955 -13.12044 -13.04085 -12.87992 -12.69812 -12.61559 -12.19180 -12.09707 -12.02384 -11.98427 -11.90602 -11.89648 -11.82101 -11.69226 -11.37993 -11.04074 -10.42468 -10.39411 -10.15919 -9.94272 -9.43734 -8.87409 -4.92643 -0.74920 -0.19721 -0.03460 0.75944 0.87492 0.96532 1.05456 1.14828 1.33143 1.36728 1.65355 1.70479 1.82017 2.00158 2.22976 2.35991 2.95558 2.96822 3.16803 3.18444 3.36869 3.41675 3.54714 3.58630 3.61175 3.79870 3.85428 3.90193 3.91578 3.98255 4.02115 4.06652 4.17157 4.21023 4.21512 4.24053 4.30200 4.31886 4.43876 4.49812 4.62263 4.64603 4.65895 4.67693 4.68985 4.72370 4.74738 4.79022 4.84682 4.92767 4.96179 4.97548 5.23361 5.25129 5.28528 5.30738 5.37217 5.74274 5.78057 6.00068 6.23342 6.56884 6.72781 7.05328 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.364 6.364 3 C 0.472 3.528 4 O -0.535 6.535 5 C -0.104 4.104 6 H 0.132 0.868 7 C -0.109 4.109 8 C 0.133 3.867 9 H 0.139 0.861 10 N -0.359 5.359 11 N -0.314 5.314 12 C 0.042 3.958 13 C -0.249 4.249 14 C 0.101 3.899 15 C -0.068 4.068 16 C -0.043 4.043 17 C 0.124 3.876 18 N -0.296 5.296 19 N -0.324 5.324 20 C 0.145 3.855 21 C -0.114 4.114 22 C -0.083 4.083 23 C -0.053 4.053 24 Cl -0.061 7.061 25 C -0.078 4.078 26 C -0.130 4.130 27 C 0.046 3.954 28 C -0.200 4.200 29 C -0.040 4.040 30 O -0.563 6.563 31 Si 0.772 3.228 32 C -0.119 4.119 33 H 0.064 0.936 34 H 0.129 0.871 35 H 0.061 0.939 36 H 0.117 0.883 37 H 0.090 0.910 38 H 0.210 0.790 39 H 0.176 0.824 40 H 0.128 0.872 41 H 0.165 0.835 42 H 0.145 0.855 43 H 0.159 0.841 44 H 0.166 0.834 45 H 0.155 0.845 46 H 0.192 0.808 47 H 0.099 0.901 48 H 0.404 0.596 49 H -0.288 1.288 50 H -0.291 1.291 51 H 0.078 0.922 52 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.238 -0.992 1.179 7.400 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.280 6.280 3 C 0.317 3.683 4 O -0.424 6.424 5 C -0.123 4.123 6 H 0.150 0.850 7 C -0.147 4.147 8 C 0.030 3.970 9 H 0.156 0.844 10 N -0.142 5.142 11 N -0.135 5.135 12 C -0.141 4.141 13 C -0.277 4.277 14 C -0.024 4.024 15 C -0.091 4.091 16 C -0.066 4.066 17 C -0.040 4.040 18 N -0.117 5.117 19 N -0.099 5.099 20 C 0.053 3.947 21 C -0.134 4.134 22 C -0.102 4.102 23 C -0.080 4.080 24 Cl -0.032 7.032 25 C -0.097 4.097 26 C -0.151 4.151 27 C -0.095 4.095 28 C -0.210 4.210 29 C -0.151 4.151 30 O -0.373 6.373 31 Si 0.677 3.323 32 C -0.158 4.158 33 H 0.083 0.917 34 H 0.147 0.853 35 H 0.079 0.921 36 H 0.136 0.864 37 H 0.108 0.892 38 H 0.226 0.774 39 H 0.193 0.807 40 H 0.146 0.854 41 H 0.183 0.817 42 H 0.163 0.837 43 H 0.176 0.824 44 H 0.183 0.817 45 H 0.172 0.828 46 H 0.208 0.792 47 H 0.117 0.883 48 H 0.255 0.745 49 H -0.215 1.215 50 H -0.218 1.218 51 H 0.096 0.904 52 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 4.156 0.127 0.001 4.158 hybrid contribution 0.391 0.398 0.099 0.567 sum 4.547 0.525 0.100 4.579 Atomic orbital electron populations 1.23560 0.74854 1.05715 1.02557 1.86536 1.24956 1.33105 1.83398 1.23960 0.92285 0.81086 0.70975 1.90655 1.67760 1.37256 1.46771 1.22690 0.85949 1.01152 1.02518 0.84997 1.23205 0.96468 1.00177 0.94852 1.22165 0.81986 0.97293 0.95512 0.84389 1.48768 1.06125 1.21529 1.37784 1.77206 1.21939 1.03632 1.10722 1.24246 0.90073 0.99953 0.99849 1.22189 1.01885 0.98599 1.05066 1.20193 0.85554 0.96405 1.00296 1.21191 0.96951 0.93319 0.97687 1.21300 0.96380 0.92821 0.96055 1.21227 0.91196 0.95472 0.96085 1.77712 1.18338 1.03206 1.12407 1.45821 1.05075 1.24979 1.34021 1.17893 0.94521 0.89699 0.92606 1.20907 0.93277 0.99937 0.99273 1.21166 1.01246 0.92875 0.94896 1.21159 0.94529 0.94878 0.97452 1.98407 1.88404 1.55012 1.61363 1.21134 0.93929 0.98048 0.96548 1.20975 1.00434 0.95138 0.98560 1.22746 0.88065 1.00394 0.98287 1.20026 0.95363 1.00214 1.05426 1.24092 0.98405 0.94322 0.98321 1.86479 1.51386 1.36333 1.63092 0.94051 0.82754 0.76420 0.79123 1.23339 0.96544 0.95013 1.00866 0.91736 0.85279 0.92060 0.86444 0.89158 0.77373 0.80702 0.85447 0.81724 0.83686 0.82352 0.81667 0.82776 0.79176 0.88342 0.74489 1.21537 1.21809 0.90355 0.86530 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.02 10.56 113.37 1.20 1.22 16 2 O -0.36 -2.16 10.57 -51.39 -0.54 -2.70 16 3 C 0.47 3.33 7.49 71.24 0.53 3.86 16 4 O -0.53 -6.41 15.65 21.97 0.34 -6.06 16 5 C -0.10 -0.32 3.90 -10.92 -0.04 -0.37 16 6 H 0.13 0.62 7.15 -2.39 -0.02 0.60 16 7 C -0.11 0.00 7.20 31.21 0.22 0.23 16 8 C 0.13 0.03 4.70 45.50 0.21 0.25 16 9 H 0.14 -0.46 7.22 -2.38 -0.02 -0.47 16 10 N -0.36 -1.25 3.75 -312.42 -1.17 -2.42 16 11 N -0.31 -1.64 10.91 -57.33 -0.63 -2.26 16 12 C 0.04 0.05 11.97 85.10 1.02 1.07 16 13 C -0.25 0.00 10.21 22.52 0.23 0.23 16 14 C 0.10 0.24 6.91 40.62 0.28 0.52 16 15 C -0.07 -0.09 9.38 23.66 0.22 0.14 16 16 C -0.04 -0.03 9.45 23.81 0.22 0.20 16 17 C 0.12 0.62 6.97 42.24 0.29 0.91 16 18 N -0.30 -2.25 11.43 -48.55 -0.55 -2.81 16 19 N -0.32 -2.01 3.81 -187.53 -0.72 -2.73 16 20 C 0.15 0.58 6.69 38.12 0.25 0.83 16 21 C -0.11 -0.32 9.66 22.39 0.22 -0.11 16 22 C -0.08 -0.04 9.82 22.28 0.22 0.17 16 23 C -0.05 -0.04 6.32 22.35 0.14 0.10 16 24 Cl -0.06 -0.08 28.95 -2.72 -0.08 -0.15 16 25 C -0.08 0.10 9.82 22.27 0.22 0.32 16 26 C -0.13 0.02 9.46 22.39 0.21 0.23 16 27 C 0.05 0.17 9.33 83.30 0.78 0.95 16 28 C -0.20 -0.62 5.43 -19.88 -0.11 -0.73 16 29 C -0.04 0.16 2.78 71.23 0.20 0.36 16 30 O -0.56 2.19 12.86 -148.98 -1.92 0.27 16 31 Si 0.77 -4.52 30.78 68.60 2.11 -2.41 16 32 C -0.12 -0.20 7.20 31.11 0.22 0.03 16 33 H 0.06 0.05 8.13 -2.39 -0.02 0.03 16 34 H 0.13 -0.62 8.14 -2.38 -0.02 -0.64 16 35 H 0.06 0.09 8.13 -2.39 -0.02 0.07 16 36 H 0.12 -0.32 8.10 -2.39 -0.02 -0.34 16 37 H 0.09 0.13 8.14 -2.38 -0.02 0.12 16 38 H 0.21 -1.05 8.06 -2.91 -0.02 -1.08 16 39 H 0.18 -0.98 7.28 -2.91 -0.02 -1.00 16 40 H 0.13 0.19 7.02 -2.91 -0.02 0.17 16 41 H 0.17 -0.69 6.90 -2.91 -0.02 -0.71 16 42 H 0.15 0.40 7.69 -2.91 -0.02 0.38 16 43 H 0.16 -0.46 8.06 -2.91 -0.02 -0.48 16 44 H 0.17 -0.93 8.06 -2.91 -0.02 -0.95 16 45 H 0.15 -0.67 6.73 -2.91 -0.02 -0.69 16 46 H 0.19 -0.15 5.33 -2.91 -0.02 -0.17 16 47 H 0.10 -0.84 7.96 -2.38 -0.02 -0.86 16 48 H 0.40 -5.86 8.74 -74.06 -0.65 -6.51 16 49 H -0.29 0.00 7.04 99.48 0.70 0.70 16 50 H -0.29 -0.07 7.11 99.48 0.71 0.64 16 51 H 0.08 0.26 8.14 -2.39 -0.02 0.24 16 52 H 0.12 0.17 7.44 -2.39 -0.02 0.15 16 Total: 0.00 -25.65 460.51 3.98 -21.67 By element: Atomic # 1 Polarization: -11.18 SS G_CDS: 0.38 Total: -10.80 kcal Atomic # 6 Polarization: 3.65 SS G_CDS: 6.75 Total: 10.40 kcal Atomic # 7 Polarization: -7.15 SS G_CDS: -3.07 Total: -10.22 kcal Atomic # 8 Polarization: -6.37 SS G_CDS: -2.11 Total: -8.49 kcal Atomic # 14 Polarization: -4.52 SS G_CDS: 2.11 Total: -2.41 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -0.08 Total: -0.15 kcal Total: -25.65 3.98 -21.67 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_6_7941758_15431928.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 148.378 kcal (2) G-P(sol) polarization free energy of solvation -25.652 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 122.726 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.983 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.670 kcal (6) G-S(sol) free energy of system = (1) + (5) 126.709 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.09 seconds