Wall clock time and date at job start Mon Mar 8 2021 15:54:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86304 * 109.46937 * 2 1 4 4 C 1.50694 * 109.47250 * 240.00005 * 2 1 3 5 5 C 1.34974 * 126.06092 * 104.99748 * 4 2 1 6 6 N 1.35917 * 107.95156 * 179.97438 * 5 4 2 7 7 C 1.40096 * 125.95946 * 180.02562 * 6 5 4 8 8 C 1.38871 * 120.05656 * 359.72968 * 7 6 5 9 9 C 1.38099 * 119.94138 * 179.77144 * 8 7 6 10 10 C 1.38392 * 120.05817 * 0.50496 * 9 8 7 11 11 Cl 1.73596 * 119.94769 * 179.77169 * 10 9 8 12 12 C 1.38399 * 120.11022 * 359.74500 * 10 9 8 13 13 C 1.38096 * 120.06070 * 0.02562 * 12 10 9 14 14 N 1.40079 * 108.08105 * 359.75681 * 6 5 4 15 15 C 1.31970 * 108.10348 * 0.41417 * 14 6 5 16 16 C 1.47389 * 126.00975 * 179.85591 * 15 14 6 17 17 C 1.34223 * 120.00047 * 359.68564 * 16 15 14 18 18 C 1.47443 * 119.99777 * 180.02562 * 17 16 15 19 19 N 1.31925 * 126.08936 * 0.35812 * 18 17 16 20 20 N 1.40070 * 108.06623 * 180.13395 * 19 18 17 21 21 C 1.46500 * 125.89477 * 179.81815 * 20 19 18 22 22 H 1.09002 * 112.85221 * 34.35852 * 21 20 19 23 23 C 1.53785 * 113.68813 * 165.62873 * 21 20 19 24 24 C 1.53777 * 87.08241 * 89.12417 * 23 21 20 25 25 H 1.08998 * 113.69520 * 270.87557 * 24 23 21 26 26 C 1.50703 * 113.61172 * 139.97748 * 24 23 21 27 27 O 1.21921 * 119.99974 * 52.50628 * 26 24 23 28 28 O 1.21921 * 120.00118 * 232.50274 * 26 24 23 29 29 C 1.53781 * 113.61339 * 263.16381 * 21 20 19 30 30 C 1.35097 * 108.20229 * 359.55504 * 20 19 18 31 31 C 1.34980 * 108.06658 * 0.26448 * 30 20 19 32 32 H 0.96701 * 113.99913 * 299.99893 * 1 2 3 33 33 H 1.09008 * 109.47145 * 119.99841 * 2 1 3 34 34 H 1.48499 * 110.00081 * 178.68157 * 3 2 1 35 35 H 1.48501 * 109.99704 * 299.99893 * 3 2 1 36 36 H 1.08010 * 126.02112 * 0.02562 * 5 4 2 37 37 H 1.07996 * 120.02865 * 359.97438 * 8 7 6 38 38 H 1.07997 * 119.97159 * 180.22651 * 9 8 7 39 39 H 1.08005 * 119.96845 * 179.97438 * 12 10 9 40 40 H 1.08004 * 120.02932 * 180.02562 * 13 12 10 41 41 H 1.08001 * 119.99994 * 179.69300 * 16 15 14 42 42 H 1.07997 * 120.00404 * 0.02562 * 17 16 15 43 43 H 1.08999 * 113.61060 * 203.67840 * 23 21 20 44 44 H 1.08997 * 113.61198 * 334.57634 * 23 21 20 45 45 H 1.09000 * 113.61578 * 25.34726 * 29 21 20 46 46 H 1.09001 * 113.61682 * 156.17306 * 29 21 20 47 47 H 1.08002 * 125.96075 * 180.24347 * 30 20 19 48 48 H 1.08000 * 126.07851 * 179.97438 * 31 30 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.4624 -0.1251 -2.3246 6 7 2.7905 -1.1057 -3.2066 7 6 3.3699 -0.9174 -4.4682 8 6 3.6545 0.3651 -4.9184 9 6 4.2300 0.5478 -6.1604 10 6 4.5134 -0.5452 -6.9606 11 17 5.2313 -0.3119 -8.5238 12 6 4.2259 -1.8240 -6.5164 13 6 3.6548 -2.0125 -5.2732 14 7 2.4540 -2.3380 -2.6317 15 6 1.9304 -2.1064 -1.4427 16 6 1.4371 -3.1260 -0.4996 17 6 1.4942 -4.4265 -0.8269 18 6 1.0003 -5.4464 0.1164 19 7 0.4753 -5.2166 1.3047 20 7 0.1395 -6.4500 1.8772 21 6 -0.4669 -6.6482 3.1959 22 1 -1.1612 -5.8527 3.4665 23 6 -1.0359 -8.0611 3.4083 24 6 0.3553 -8.4578 3.9296 25 1 1.0322 -8.8068 3.1498 26 6 0.3132 -9.3776 5.1226 27 8 -0.3439 -10.4037 5.0784 28 8 0.9362 -9.0957 6.1320 29 6 0.5522 -6.9781 4.2993 30 6 0.4660 -7.4249 1.0007 31 6 0.9985 -6.8423 -0.0942 32 1 -0.3933 0.4417 0.7651 33 1 1.7924 -0.5138 0.8901 34 1 3.5346 1.7704 0.0321 35 1 1.5614 2.4679 -1.2085 36 1 2.6028 0.9356 -2.4727 37 1 3.4291 1.2187 -4.2964 38 1 4.4549 1.5448 -6.5095 39 1 4.4477 -2.6754 -7.1429 40 1 3.4311 -3.0107 -4.9269 41 1 1.0296 -2.8268 0.4548 42 1 1.9019 -4.7259 -1.7810 43 1 -1.8165 -8.1078 4.1677 44 1 -1.3146 -8.5633 2.4819 45 1 1.5556 -6.6061 4.0922 46 1 0.2065 -6.7275 5.3022 47 1 0.3258 -8.4853 1.1504 48 1 1.3593 -7.3532 -0.9747 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_6_7941758_15608776.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:54:58 Heat of formation + Delta-G solvation = 41.249308 kcal Electronic energy + Delta-G solvation = -35864.037952 eV Core-core repulsion = 30799.409646 eV Total energy + Delta-G solvation = -5064.628307 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.105 amu Computer time = 1.72 seconds Orbital eigenvalues (eV) -42.86420 -42.44584 -40.44729 -40.34507 -38.29589 -37.78694 -37.47542 -36.01105 -34.91320 -34.09207 -32.75616 -32.07257 -31.54698 -31.08163 -29.77448 -27.26188 -26.79621 -26.64548 -25.37760 -24.10443 -23.38056 -22.62849 -21.98707 -20.92905 -20.74614 -19.96597 -19.62711 -19.43663 -18.31542 -17.86186 -17.74675 -17.12508 -16.63822 -16.55367 -16.37218 -16.23649 -16.01340 -15.87166 -15.63977 -15.45721 -15.37275 -15.12264 -14.91857 -14.83049 -14.60665 -14.52187 -14.07000 -13.91144 -13.61709 -13.55347 -13.44084 -13.31090 -13.16650 -13.05904 -12.94449 -12.80834 -12.60578 -12.14582 -12.09804 -11.94386 -11.83550 -11.74722 -11.66181 -11.48652 -10.95099 -10.39764 -10.38709 -10.34852 -10.28986 -10.16221 -9.91279 -9.55370 -9.42610 -8.92240 -4.91154 -0.68319 -0.03377 0.01529 0.80054 0.91505 0.99904 1.09631 1.34846 1.35528 1.62982 1.75860 1.98107 2.37348 2.42554 2.95996 2.98757 3.15744 3.23003 3.47070 3.49871 3.59058 3.65137 3.72519 3.81932 3.82602 3.83618 3.92646 3.97125 4.04658 4.13005 4.26201 4.30775 4.35091 4.37938 4.53189 4.59137 4.64640 4.65629 4.70671 4.72394 4.74212 4.75021 4.85501 4.89881 4.91515 4.96785 4.99891 5.18878 5.26115 5.32495 5.36151 5.46278 5.63489 5.83891 6.03991 6.26375 6.66186 7.00840 7.98925 8.31991 Molecular weight = 426.11amu Principal moments of inertia in cm(-1) A = 0.008972 B = 0.001334 C = 0.001188 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3120.107184 B =20983.953898 C =23559.771909 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.059 4.059 3 Si 0.790 3.210 4 C -0.207 4.207 5 C 0.053 3.947 6 N -0.323 5.323 7 C 0.144 3.856 8 C -0.129 4.129 9 C -0.075 4.075 10 C -0.051 4.051 11 Cl -0.059 7.059 12 C -0.082 4.082 13 C -0.117 4.117 14 N -0.295 5.295 15 C 0.126 3.874 16 C -0.064 4.064 17 C -0.034 4.034 18 C 0.079 3.921 19 N -0.301 5.301 20 N -0.349 5.349 21 C 0.148 3.852 22 H 0.131 0.869 23 C -0.102 4.102 24 C -0.178 4.178 25 H 0.096 0.904 26 C 0.478 3.522 27 O -0.736 6.736 28 O -0.736 6.736 29 C -0.113 4.113 30 C 0.051 3.949 31 C -0.259 4.259 32 H 0.401 0.599 33 H 0.079 0.921 34 H -0.286 1.286 35 H -0.274 1.274 36 H 0.200 0.800 37 H 0.157 0.843 38 H 0.170 0.830 39 H 0.160 0.840 40 H 0.142 0.858 41 H 0.140 0.860 42 H 0.148 0.852 43 H 0.098 0.902 44 H 0.091 0.909 45 H 0.063 0.937 46 H 0.091 0.909 47 H 0.186 0.814 48 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.349 32.929 -28.382 43.934 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.168 4.168 3 Si 0.692 3.308 4 C -0.217 4.217 5 C -0.088 4.088 6 N -0.098 5.098 7 C 0.052 3.948 8 C -0.150 4.150 9 C -0.094 4.094 10 C -0.079 4.079 11 Cl -0.030 7.030 12 C -0.101 4.101 13 C -0.137 4.137 14 N -0.115 5.115 15 C -0.038 4.038 16 C -0.088 4.088 17 C -0.057 4.057 18 C -0.084 4.084 19 N -0.125 5.125 20 N -0.131 5.131 21 C 0.046 3.954 22 H 0.149 0.851 23 C -0.141 4.141 24 C -0.199 4.199 25 H 0.114 0.886 26 C 0.318 3.682 27 O -0.655 6.655 28 O -0.654 6.654 29 C -0.152 4.152 30 C -0.094 4.094 31 C -0.288 4.288 32 H 0.252 0.748 33 H 0.096 0.904 34 H -0.213 1.213 35 H -0.200 1.200 36 H 0.217 0.783 37 H 0.174 0.826 38 H 0.187 0.813 39 H 0.177 0.823 40 H 0.159 0.841 41 H 0.158 0.842 42 H 0.166 0.834 43 H 0.116 0.884 44 H 0.110 0.890 45 H 0.082 0.918 46 H 0.109 0.891 47 H 0.203 0.797 48 H 0.192 0.808 Dipole moment (debyes) X Y Z Total from point charges 6.918 32.964 -29.091 44.506 hybrid contribution 0.231 -1.286 -0.011 1.307 sum 7.149 31.678 -29.102 43.606 Atomic orbital electron populations 1.86474 1.17484 1.82637 1.50926 1.24427 0.85658 1.11942 0.94737 0.93818 0.77373 0.73952 0.85648 1.20044 1.10448 0.92386 0.98802 1.22712 1.00318 0.96230 0.89560 1.45882 1.46820 1.04380 1.12766 1.17965 0.98394 0.95985 0.82491 1.20996 1.01701 0.94666 0.97651 1.21138 0.96581 0.99801 0.91904 1.21129 1.02418 0.95131 0.89201 1.98397 1.81779 1.97267 1.25515 1.21151 0.96917 0.96901 0.95108 1.20931 1.00200 0.98765 0.93783 1.77712 1.21686 1.02317 1.09831 1.21136 0.96630 0.93874 0.92153 1.21197 0.99803 0.90364 0.97404 1.21330 0.97231 0.90266 0.96874 1.21165 0.99811 0.94499 0.92879 1.77548 1.21211 1.03620 1.10082 1.48412 1.47206 1.03696 1.13770 1.22129 0.95309 0.99515 0.78473 0.85129 1.23003 0.96152 0.92715 1.02217 1.23435 0.99394 0.97127 0.99898 0.88612 1.19044 0.78569 0.84025 0.86583 1.90574 1.53257 1.33546 1.88134 1.90575 1.55162 1.81104 1.38573 1.23043 0.99332 0.94366 0.98437 1.22875 0.99303 0.96811 0.90405 1.21812 1.12495 0.92433 1.02035 0.74827 0.90350 1.21257 1.19968 0.78310 0.82571 0.81288 0.82282 0.84064 0.84225 0.83448 0.88379 0.89025 0.91802 0.89065 0.79746 0.80792 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -8.87 12.86 -148.98 -1.92 -10.79 16 2 C -0.06 -0.88 2.78 71.23 0.20 -0.69 16 3 Si 0.79 6.85 30.78 68.60 2.11 8.96 16 4 C -0.21 -4.41 5.43 -19.89 -0.11 -4.51 16 5 C 0.05 0.99 9.33 83.31 0.78 1.77 16 6 N -0.32 -6.87 3.81 -187.52 -0.72 -7.58 16 7 C 0.14 2.45 6.69 38.12 0.25 2.70 16 8 C -0.13 -1.46 9.46 22.39 0.21 -1.25 16 9 C -0.08 -0.68 9.82 22.27 0.22 -0.46 16 10 C -0.05 -0.57 6.32 22.34 0.14 -0.43 16 11 Cl -0.06 -0.61 28.95 -2.72 -0.08 -0.69 16 12 C -0.08 -0.98 9.82 22.27 0.22 -0.76 16 13 C -0.12 -1.85 9.66 22.39 0.22 -1.63 16 14 N -0.29 -7.44 11.42 -48.52 -0.55 -8.00 16 15 C 0.13 3.17 6.97 42.26 0.29 3.47 16 16 C -0.06 -1.65 9.55 23.76 0.23 -1.42 16 17 C -0.03 -0.87 9.77 23.78 0.23 -0.64 16 18 C 0.08 2.35 6.98 42.28 0.30 2.65 16 19 N -0.30 -10.02 12.14 -48.53 -0.59 -10.61 16 20 N -0.35 -11.59 3.80 -325.13 -1.23 -12.82 16 21 C 0.15 4.98 5.17 45.52 0.24 5.22 16 22 H 0.13 3.79 8.14 -2.39 -0.02 3.77 16 23 C -0.10 -3.85 6.78 31.12 0.21 -3.64 16 24 C -0.18 -8.46 3.79 -11.01 -0.04 -8.50 16 25 H 0.10 4.28 6.86 -2.39 -0.02 4.27 16 26 C 0.48 31.18 7.47 71.24 0.53 31.71 16 27 O -0.74 -52.64 17.88 19.05 0.34 -52.30 16 28 O -0.74 -52.98 17.41 19.05 0.33 -52.65 16 29 C -0.11 -4.65 7.10 31.12 0.22 -4.43 16 30 C 0.05 1.54 9.59 83.44 0.80 2.34 16 31 C -0.26 -7.15 10.77 22.24 0.24 -6.91 16 32 H 0.40 1.96 8.74 -74.06 -0.65 1.31 16 33 H 0.08 1.10 7.96 -2.38 -0.02 1.08 16 34 H -0.29 -3.93 7.11 99.48 0.71 -3.23 16 35 H -0.27 -3.26 7.04 99.48 0.70 -2.56 16 36 H 0.20 2.43 5.33 -2.91 -0.02 2.42 16 37 H 0.16 1.05 6.73 -2.91 -0.02 1.03 16 38 H 0.17 0.64 8.06 -2.91 -0.02 0.62 16 39 H 0.16 1.33 8.06 -2.91 -0.02 1.31 16 40 H 0.14 2.41 7.69 -2.91 -0.02 2.39 16 41 H 0.14 3.65 7.71 -2.91 -0.02 3.63 16 42 H 0.15 3.39 7.72 -2.91 -0.02 3.37 16 43 H 0.10 3.80 8.09 -2.39 -0.02 3.78 16 44 H 0.09 3.05 7.04 -2.39 -0.02 3.03 16 45 H 0.06 2.61 8.14 -2.39 -0.02 2.59 16 46 H 0.09 3.91 7.98 -2.39 -0.02 3.89 16 47 H 0.19 5.08 6.59 -2.91 -0.02 5.06 16 48 H 0.17 3.72 8.06 -2.91 -0.02 3.69 16 Total: -1.00 -93.96 435.36 3.51 -90.45 By element: Atomic # 1 Polarization: 41.01 SS G_CDS: 0.44 Total: 41.45 kcal Atomic # 6 Polarization: 9.20 SS G_CDS: 5.38 Total: 14.58 kcal Atomic # 7 Polarization: -35.91 SS G_CDS: -3.09 Total: -39.01 kcal Atomic # 8 Polarization: -114.49 SS G_CDS: -1.24 Total: -115.74 kcal Atomic # 14 Polarization: 6.85 SS G_CDS: 2.11 Total: 8.96 kcal Atomic # 17 Polarization: -0.61 SS G_CDS: -0.08 Total: -0.69 kcal Total: -93.96 3.51 -90.45 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_6_7941758_15608776.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 131.697 kcal (2) G-P(sol) polarization free energy of solvation -93.958 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.738 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.511 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -90.447 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.249 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.72 seconds