Wall clock time and date at job start Mon Mar 8 2021 12:01:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86303 * 109.46956 * 2 1 4 4 C 1.50692 * 109.47411 * 119.99894 * 2 1 3 5 5 C 1.38240 * 119.93799 * 65.00378 * 4 2 1 6 6 C 1.38194 * 120.07360 * 179.97438 * 5 4 2 7 7 C 1.38677 * 119.94757 * 0.02562 * 6 5 4 8 8 O 1.35925 * 120.05563 * 179.97438 * 7 6 5 9 9 C 1.42903 * 116.99722 * 0.02562 * 8 7 6 10 10 C 1.53000 * 109.46726 * 180.02562 * 9 8 7 11 11 H 1.08996 * 112.85005 * 316.18751 * 10 9 8 12 12 C 1.53775 * 113.61825 * 87.50378 * 10 9 8 13 13 C 1.53776 * 87.08393 * 139.97637 * 12 10 9 14 14 H 1.09007 * 113.68892 * 89.12809 * 13 12 10 15 15 O 1.42897 * 113.61868 * 220.01645 * 13 12 10 16 16 C 1.53774 * 87.08069 * 334.56900 * 13 12 10 17 17 C 1.38834 * 119.88776 * 0.25766 * 7 6 5 18 18 Br 1.89100 * 120.03760 * 179.72594 * 17 7 6 19 19 C 1.38191 * 119.92106 * 359.44672 * 17 7 6 20 20 H 0.96708 * 114.00120 * 299.99498 * 1 2 3 21 21 H 1.09004 * 109.46948 * 240.00471 * 2 1 3 22 22 H 1.48494 * 110.00046 * 178.68482 * 3 2 1 23 23 H 1.48502 * 110.00067 * 300.00436 * 3 2 1 24 24 H 1.08005 * 119.96991 * 359.97438 * 5 4 2 25 25 H 1.07994 * 120.02399 * 180.02562 * 6 5 4 26 26 H 1.09002 * 109.47382 * 60.00054 * 9 8 7 27 27 H 1.09001 * 109.46938 * 300.00041 * 9 8 7 28 28 H 1.09005 * 113.61502 * 254.53312 * 12 10 9 29 29 H 1.08999 * 113.61676 * 25.42734 * 12 10 9 30 30 H 0.96701 * 114.00064 * 277.50120 * 15 13 12 31 31 H 1.09006 * 113.61277 * 270.88016 * 16 13 12 32 32 H 1.09001 * 113.69334 * 139.99428 * 16 13 12 33 33 H 1.08005 * 119.97473 * 180.27008 * 19 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 1.6841 -2.0602 1.3970 6 6 2.1440 -2.7145 2.5240 7 6 2.8538 -2.0158 3.4889 8 8 3.3067 -2.6571 4.5985 9 6 3.0158 -4.0521 4.7057 10 6 3.6005 -4.5961 6.0107 11 1 4.6110 -4.2364 6.2041 12 6 2.6541 -4.4574 7.2148 13 6 3.1262 -5.8556 7.6470 14 1 4.0067 -5.8414 8.2895 15 8 2.0782 -6.6805 8.1601 16 6 3.4482 -6.1184 6.1665 17 6 3.0959 -0.6589 3.3225 18 35 4.0566 0.2997 4.6393 19 6 2.6391 -0.0109 2.1907 20 1 -0.3934 0.4417 0.7651 21 1 1.7923 -0.5138 -0.8901 22 1 3.5345 1.7704 0.0320 23 1 1.5613 2.4680 -1.2085 24 1 1.1310 -2.6042 0.6456 25 1 1.9508 -3.7692 2.6531 26 1 3.4571 -4.5812 3.8610 27 1 1.9358 -4.1993 4.7025 28 1 2.9415 -3.6660 7.9071 29 1 1.6002 -4.4181 6.9396 30 1 1.8711 -6.5198 9.0909 31 1 2.6114 -6.5333 5.6046 32 1 4.3765 -6.6683 6.0110 33 1 2.8307 1.0437 2.0583 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_10154_11354858.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:01:23 Heat of formation + Delta-G solvation = -60.436847 kcal Electronic energy + Delta-G solvation = -18203.845129 eV Core-core repulsion = 15050.796674 eV Total energy + Delta-G solvation = -3153.048456 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.019 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -41.57031 -40.44048 -39.10909 -37.30053 -36.06978 -33.46703 -32.12069 -30.42220 -29.40497 -26.87207 -26.38481 -24.59125 -23.03116 -22.29969 -20.71403 -19.38380 -18.65595 -18.25038 -17.34471 -17.14181 -16.55849 -16.40733 -15.99689 -15.73462 -15.62958 -14.83919 -14.75931 -14.40632 -14.20205 -13.75917 -13.57044 -13.54217 -12.77988 -12.71268 -12.44630 -12.28705 -12.12180 -11.86328 -11.82223 -11.79357 -11.34206 -11.13214 -10.84760 -10.49975 -10.00301 -9.27876 -5.08128 -0.04632 0.08270 0.67039 1.23399 1.59303 1.89870 1.93630 2.37741 3.12833 3.32690 3.39430 3.43773 3.47800 3.61618 3.72146 3.76845 3.83010 4.01053 4.08621 4.12654 4.23796 4.34093 4.38736 4.52339 4.58800 4.65313 4.66968 4.77088 4.86976 4.98782 5.03091 5.24014 5.26589 5.44128 6.13566 6.51063 6.62271 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.060 4.060 3 Si 0.677 3.323 4 C -0.155 4.155 5 C -0.035 4.035 6 C -0.204 4.204 7 C 0.165 3.835 8 O -0.297 6.297 9 C 0.069 3.931 10 C -0.109 4.109 11 H 0.107 0.893 12 C -0.163 4.163 13 C 0.076 3.924 14 H 0.085 0.915 15 O -0.560 6.560 16 C -0.120 4.120 17 C -0.124 4.124 18 Br -0.030 7.030 19 C -0.049 4.049 20 H 0.380 0.620 21 H 0.116 0.884 22 H -0.254 1.254 23 H -0.250 1.250 24 H 0.136 0.864 25 H 0.139 0.861 26 H 0.068 0.932 27 H 0.069 0.931 28 H 0.075 0.925 29 H 0.091 0.909 30 H 0.381 0.619 31 H 0.093 0.907 32 H 0.081 0.919 33 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.580 -0.560 2.131 2.278 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.171 4.171 3 Si 0.579 3.421 4 C -0.156 4.156 5 C -0.053 4.053 6 C -0.223 4.223 7 C 0.117 3.883 8 O -0.210 6.210 9 C -0.006 4.006 10 C -0.127 4.127 11 H 0.125 0.875 12 C -0.200 4.200 13 C 0.017 3.983 14 H 0.103 0.897 15 O -0.366 6.366 16 C -0.158 4.158 17 C -0.204 4.204 18 Br 0.055 6.945 19 C -0.068 4.068 20 H 0.227 0.773 21 H 0.133 0.867 22 H -0.178 1.178 23 H -0.175 1.175 24 H 0.154 0.846 25 H 0.157 0.843 26 H 0.087 0.913 27 H 0.087 0.913 28 H 0.094 0.906 29 H 0.109 0.891 30 H 0.229 0.771 31 H 0.112 0.888 32 H 0.099 0.901 33 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 0.484 -0.078 1.212 1.307 hybrid contribution -0.157 -0.783 0.011 0.798 sum 0.327 -0.860 1.223 1.531 Atomic orbital electron populations 1.86511 1.16980 1.81678 1.49307 1.24931 0.85280 1.09892 0.97008 0.94844 0.81501 0.78156 0.87608 1.20218 1.02518 0.95108 0.97772 1.20962 0.94894 0.93403 0.96067 1.21325 1.04041 1.01077 0.95903 1.18625 0.92509 0.90526 0.86640 1.86198 1.72931 1.23972 1.37854 1.22927 1.00402 0.78715 0.98572 1.22319 1.01016 0.95971 0.93390 0.87472 1.23771 1.00278 0.98190 0.97807 1.23283 0.90369 0.89884 0.94756 0.89712 1.86519 1.55616 1.63140 1.31328 1.23070 1.02951 0.94486 0.95253 1.20971 1.08730 0.92501 0.98213 1.96763 1.72893 1.72853 1.51974 1.20801 0.95411 0.99362 0.91235 0.77271 0.86707 1.17837 1.17516 0.84640 0.84339 0.91335 0.91297 0.90642 0.89059 0.77144 0.88811 0.90078 0.84179 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.13 12.83 -35.23 -0.45 -0.33 16 2 C -0.06 0.04 2.80 36.00 0.10 0.14 16 3 Si 0.68 -0.66 29.80 -169.99 -5.07 -5.72 16 4 C -0.15 0.01 5.35 -104.61 -0.56 -0.55 16 5 C -0.03 0.00 9.68 -39.60 -0.38 -0.38 16 6 C -0.20 0.00 9.04 -39.44 -0.36 -0.36 16 7 C 0.17 0.24 6.68 -39.20 -0.26 -0.03 16 8 O -0.30 -0.39 9.47 -19.51 -0.18 -0.58 16 9 C 0.07 -0.07 4.58 37.16 0.17 0.10 16 10 C -0.11 0.15 4.01 -89.81 -0.36 -0.21 16 11 H 0.11 -0.14 8.14 -51.93 -0.42 -0.57 16 12 C -0.16 0.19 7.46 -25.92 -0.19 0.00 16 13 C 0.08 -0.08 5.21 -25.93 -0.14 -0.22 16 14 H 0.09 -0.19 8.14 -51.93 -0.42 -0.62 16 15 O -0.56 -0.12 13.67 -35.23 -0.48 -0.60 16 16 C -0.12 0.17 7.47 -25.92 -0.19 -0.02 16 17 C -0.12 -0.20 6.24 -39.38 -0.25 -0.45 16 18 Br -0.03 -0.06 33.16 -68.01 -2.26 -2.31 16 19 C -0.05 -0.02 8.40 -39.58 -0.33 -0.35 16 20 H 0.38 -1.49 8.70 45.56 0.40 -1.10 16 21 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 22 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 23 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 24 H 0.14 -0.16 8.06 -52.48 -0.42 -0.59 16 25 H 0.14 -0.26 6.30 -52.49 -0.33 -0.59 16 26 H 0.07 -0.14 7.66 -51.93 -0.40 -0.54 16 27 H 0.07 -0.12 7.36 -51.93 -0.38 -0.50 16 28 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 30 H 0.38 -1.40 9.12 45.56 0.42 -0.99 16 31 H 0.09 -0.10 8.10 -51.93 -0.42 -0.52 16 32 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.14 -0.17 4.90 -52.48 -0.26 -0.43 16 LS Contribution 298.69 15.07 4.50 4.50 Total: 0.00 -6.11 298.69 -9.80 -15.91 By element: Atomic # 1 Polarization: -5.43 SS G_CDS: -3.11 Total: -8.54 kcal Atomic # 6 Polarization: 0.43 SS G_CDS: -2.75 Total: -2.33 kcal Atomic # 8 Polarization: -0.39 SS G_CDS: -1.12 Total: -1.51 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: -5.07 Total: -5.72 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.26 Total: -2.31 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -6.11 -9.80 -15.91 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10154_11354858.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.525 kcal (2) G-P(sol) polarization free energy of solvation -6.112 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.637 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.800 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.912 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.437 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds