Wall clock time and date at job start Mon Mar 8 2021 12:01:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86303 * 109.46956 * 2 1 4 4 C 1.50692 * 109.47411 * 119.99894 * 2 1 3 5 5 C 1.38240 * 119.93799 * 65.00378 * 4 2 1 6 6 C 1.38194 * 120.07360 * 179.97438 * 5 4 2 7 7 C 1.38677 * 119.94757 * 0.02562 * 6 5 4 8 8 O 1.35925 * 120.05563 * 179.97438 * 7 6 5 9 9 C 1.42903 * 116.99722 * 0.02562 * 8 7 6 10 10 C 1.53000 * 109.46726 * 180.02562 * 9 8 7 11 11 H 1.08996 * 112.85005 * 316.18751 * 10 9 8 12 12 C 1.53775 * 113.61825 * 87.50378 * 10 9 8 13 13 C 1.53776 * 87.08393 * 139.97637 * 12 10 9 14 14 H 1.09007 * 113.68892 * 89.12809 * 13 12 10 15 15 O 1.42897 * 113.61868 * 220.01645 * 13 12 10 16 16 C 1.53774 * 87.08069 * 334.56900 * 13 12 10 17 17 C 1.38834 * 119.88776 * 0.25766 * 7 6 5 18 18 Br 1.89100 * 120.03760 * 179.72594 * 17 7 6 19 19 C 1.38191 * 119.92106 * 359.44672 * 17 7 6 20 20 H 0.96708 * 114.00120 * 299.99498 * 1 2 3 21 21 H 1.09004 * 109.46948 * 240.00471 * 2 1 3 22 22 H 1.48494 * 110.00046 * 178.68482 * 3 2 1 23 23 H 1.48502 * 110.00067 * 300.00436 * 3 2 1 24 24 H 1.08005 * 119.96991 * 359.97438 * 5 4 2 25 25 H 1.07994 * 120.02399 * 180.02562 * 6 5 4 26 26 H 1.09002 * 109.47382 * 60.00054 * 9 8 7 27 27 H 1.09001 * 109.46938 * 300.00041 * 9 8 7 28 28 H 1.09005 * 113.61502 * 254.53312 * 12 10 9 29 29 H 1.08999 * 113.61676 * 25.42734 * 12 10 9 30 30 H 0.96701 * 114.00064 * 277.50120 * 15 13 12 31 31 H 1.09006 * 113.61277 * 270.88016 * 16 13 12 32 32 H 1.09001 * 113.69334 * 139.99428 * 16 13 12 33 33 H 1.08005 * 119.97473 * 180.27008 * 19 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 1.6841 -2.0602 1.3970 6 6 2.1440 -2.7145 2.5240 7 6 2.8538 -2.0158 3.4889 8 8 3.3067 -2.6571 4.5985 9 6 3.0158 -4.0521 4.7057 10 6 3.6005 -4.5961 6.0107 11 1 4.6110 -4.2364 6.2041 12 6 2.6541 -4.4574 7.2148 13 6 3.1262 -5.8556 7.6470 14 1 4.0067 -5.8414 8.2895 15 8 2.0782 -6.6805 8.1601 16 6 3.4482 -6.1184 6.1665 17 6 3.0959 -0.6589 3.3225 18 35 4.0566 0.2997 4.6393 19 6 2.6391 -0.0109 2.1907 20 1 -0.3934 0.4417 0.7651 21 1 1.7923 -0.5138 -0.8901 22 1 3.5345 1.7704 0.0320 23 1 1.5613 2.4680 -1.2085 24 1 1.1310 -2.6042 0.6456 25 1 1.9508 -3.7692 2.6531 26 1 3.4571 -4.5812 3.8610 27 1 1.9358 -4.1993 4.7025 28 1 2.9415 -3.6660 7.9071 29 1 1.6002 -4.4181 6.9396 30 1 1.8711 -6.5198 9.0909 31 1 2.6114 -6.5333 5.6046 32 1 4.3765 -6.6683 6.0110 33 1 2.8307 1.0437 2.0583 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_10154_11354858.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:01:22 Heat of formation + Delta-G solvation = -58.567077 kcal Electronic energy + Delta-G solvation = -18203.764050 eV Core-core repulsion = 15050.796674 eV Total energy + Delta-G solvation = -3152.967376 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.019 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -41.54571 -40.35435 -39.07793 -37.26158 -36.00723 -33.48850 -32.10119 -30.44317 -29.34091 -26.76326 -26.35278 -24.53897 -22.98718 -22.26959 -20.60547 -19.35701 -18.58075 -18.21072 -17.32192 -17.09173 -16.52325 -16.32387 -15.94990 -15.68908 -15.58210 -14.79871 -14.76160 -14.36131 -14.24892 -13.72254 -13.52444 -13.46065 -12.72162 -12.61370 -12.39567 -12.25432 -12.15705 -11.87464 -11.85697 -11.71257 -11.23258 -11.22016 -10.74998 -10.46734 -10.01288 -9.29719 -5.04041 -0.05130 0.08405 0.60969 1.27467 1.59424 1.92726 1.95043 2.38380 3.27816 3.44469 3.47794 3.54012 3.55680 3.69903 3.80302 3.84745 3.94881 4.05454 4.21474 4.24138 4.33156 4.40167 4.43311 4.60305 4.68204 4.75108 4.78590 4.79750 4.98103 5.03759 5.12370 5.28388 5.35884 5.48457 6.16431 6.75384 6.86238 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.058 4.058 3 Si 0.751 3.249 4 C -0.154 4.154 5 C -0.037 4.037 6 C -0.203 4.203 7 C 0.153 3.847 8 O -0.311 6.311 9 C 0.065 3.935 10 C -0.104 4.104 11 H 0.106 0.894 12 C -0.162 4.162 13 C 0.073 3.927 14 H 0.097 0.903 15 O -0.581 6.581 16 C -0.120 4.120 17 C -0.140 4.140 18 Br -0.040 7.040 19 C -0.052 4.052 20 H 0.396 0.604 21 H 0.115 0.885 22 H -0.286 1.286 23 H -0.293 1.293 24 H 0.148 0.852 25 H 0.156 0.844 26 H 0.079 0.921 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.084 0.916 30 H 0.395 0.605 31 H 0.089 0.911 32 H 0.088 0.912 33 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.872 -1.066 2.096 2.508 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.169 4.169 3 Si 0.658 3.342 4 C -0.156 4.156 5 C -0.056 4.056 6 C -0.223 4.223 7 C 0.105 3.895 8 O -0.224 6.224 9 C -0.009 4.009 10 C -0.122 4.122 11 H 0.124 0.876 12 C -0.199 4.199 13 C 0.014 3.986 14 H 0.114 0.886 15 O -0.390 6.390 16 C -0.157 4.157 17 C -0.220 4.220 18 Br 0.045 6.955 19 C -0.071 4.071 20 H 0.246 0.754 21 H 0.132 0.868 22 H -0.213 1.213 23 H -0.220 1.220 24 H 0.166 0.834 25 H 0.174 0.826 26 H 0.097 0.903 27 H 0.093 0.907 28 H 0.092 0.908 29 H 0.102 0.898 30 H 0.245 0.755 31 H 0.108 0.892 32 H 0.106 0.894 33 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 0.173 -0.590 1.212 1.359 hybrid contribution -0.081 -0.627 0.002 0.633 sum 0.092 -1.217 1.214 1.722 Atomic orbital electron populations 1.86477 1.16935 1.82065 1.50537 1.24927 0.85365 1.09825 0.96767 0.93960 0.78411 0.76444 0.85433 1.20278 1.02309 0.95293 0.97696 1.21169 0.94687 0.93465 0.96248 1.21523 1.03396 1.01892 0.95455 1.18800 0.92998 0.90644 0.87078 1.86177 1.73164 1.25029 1.38021 1.23059 1.00902 0.77853 0.99086 1.22274 1.00821 0.95990 0.93157 0.87551 1.23734 0.99917 0.98292 0.98006 1.23401 0.90492 0.89556 0.95126 0.88553 1.86474 1.56102 1.63610 1.32785 1.23071 1.03135 0.94407 0.95092 1.21124 1.09470 0.92878 0.98567 1.96736 1.73221 1.73031 1.52536 1.20934 0.95290 0.99950 0.90967 0.75430 0.86778 1.21256 1.22009 0.83437 0.82649 0.90297 0.90747 0.90755 0.89775 0.75504 0.89219 0.89353 0.83171 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.72 12.83 -148.98 -1.91 -1.19 16 2 C -0.06 0.10 2.80 71.23 0.20 0.30 16 3 Si 0.75 -1.28 29.80 68.60 2.04 0.76 16 4 C -0.15 0.10 5.35 -19.86 -0.11 -0.01 16 5 C -0.04 0.04 9.68 22.26 0.22 0.26 16 6 C -0.20 0.13 9.04 22.36 0.20 0.33 16 7 C 0.15 0.44 6.68 22.52 0.15 0.59 16 8 O -0.31 -0.88 9.47 -92.71 -0.88 -1.76 16 9 C 0.07 -0.15 4.58 71.98 0.33 0.18 16 10 C -0.10 0.30 4.01 -10.27 -0.04 0.26 16 11 H 0.11 -0.28 8.14 -2.39 -0.02 -0.30 16 12 C -0.16 0.34 7.46 31.12 0.23 0.57 16 13 C 0.07 -0.17 5.21 31.12 0.16 -0.01 16 14 H 0.10 -0.48 8.14 -2.38 -0.02 -0.50 16 15 O -0.58 -0.24 13.67 -148.98 -2.04 -2.28 16 16 C -0.12 0.37 7.47 31.12 0.23 0.60 16 17 C -0.14 -0.50 6.24 22.40 0.14 -0.36 16 18 Br -0.04 -0.18 33.16 -20.37 -0.68 -0.85 16 19 C -0.05 -0.03 8.40 22.27 0.19 0.16 16 20 H 0.40 -3.51 8.70 -74.05 -0.64 -4.16 16 21 H 0.11 -0.16 7.96 -2.38 -0.02 -0.18 16 22 H -0.29 -1.03 7.11 99.48 0.71 -0.32 16 23 H -0.29 -1.56 7.11 99.48 0.71 -0.85 16 24 H 0.15 -0.54 8.06 -2.91 -0.02 -0.57 16 25 H 0.16 -0.74 6.30 -2.91 -0.02 -0.76 16 26 H 0.08 -0.36 7.66 -2.39 -0.02 -0.38 16 27 H 0.07 -0.27 7.36 -2.39 -0.02 -0.29 16 28 H 0.07 -0.15 8.14 -2.38 -0.02 -0.17 16 29 H 0.08 -0.06 7.90 -2.39 -0.02 -0.07 16 30 H 0.39 -2.89 9.12 -74.06 -0.68 -3.56 16 31 H 0.09 -0.20 8.10 -2.38 -0.02 -0.22 16 32 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 33 H 0.15 -0.37 4.90 -2.91 -0.01 -0.38 16 Total: 0.00 -13.91 298.69 -1.69 -15.60 By element: Atomic # 1 Polarization: -13.00 SS G_CDS: -0.13 Total: -13.14 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: 1.90 Total: 2.86 kcal Atomic # 8 Polarization: -0.40 SS G_CDS: -4.83 Total: -5.23 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: 2.04 Total: 0.76 kcal Atomic # 35 Polarization: -0.18 SS G_CDS: -0.68 Total: -0.85 kcal Total: -13.91 -1.69 -15.60 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10154_11354858.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.969 kcal (2) G-P(sol) polarization free energy of solvation -13.911 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.687 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.598 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.567 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds