Wall clock time and date at job start Mon Mar 8 2021 14:44:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.38242 * 119.94234 * 300.00381 * 4 2 1 6 6 C 1.38240 * 120.04498 * 179.97438 * 5 4 2 7 7 Br 1.89099 * 120.03659 * 179.97438 * 6 5 4 8 8 C 1.38785 * 119.92840 * 359.97438 * 6 5 4 9 9 O 1.35926 * 120.06132 * 179.97438 * 8 6 5 10 10 C 1.42899 * 117.00351 * 180.02562 * 9 8 6 11 11 C 1.52996 * 109.47083 * 180.02562 * 10 9 8 12 12 H 1.08998 * 109.47063 * 179.97438 * 11 10 9 13 13 O 1.42969 * 109.46902 * 299.99749 * 11 10 9 14 14 C 1.43092 * 113.76507 * 178.79717 * 13 11 10 15 15 C 1.53266 * 108.94227 * 302.02636 * 14 13 11 16 16 H 1.08994 * 109.57716 * 294.71730 * 15 14 13 17 17 N 1.46498 * 109.57258 * 174.33834 * 15 14 13 18 18 C 1.34531 * 124.46018 * 299.69846 * 17 15 14 19 19 O 1.21446 * 125.70766 * 0.03321 * 18 17 15 20 20 C 1.47816 * 108.58223 * 179.91019 * 18 17 15 21 21 C 1.40944 * 105.87631 * 0.34491 * 20 18 17 22 22 C 1.38571 * 119.81819 * 179.79643 * 21 20 18 23 23 C 1.38609 * 119.72056 * 0.02562 * 22 21 20 24 24 C 1.38234 * 120.45964 * 359.97438 * 23 22 21 25 25 C 1.38563 * 134.29808 * 180.10099 * 20 18 17 26 26 C 1.34520 * 124.46363 * 120.00258 * 17 15 14 27 27 O 1.21450 * 125.70781 * 359.95976 * 26 17 15 28 28 C 1.53256 * 108.84398 * 54.52808 * 15 14 13 29 29 O 1.42967 * 109.47193 * 59.99956 * 11 10 9 30 30 C 1.38723 * 119.88582 * 0.02562 * 8 6 5 31 31 C 1.38141 * 119.95000 * 359.74612 * 30 8 6 32 32 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 33 33 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 34 34 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 35 35 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 36 36 H 1.07997 * 119.97783 * 359.95521 * 5 4 2 37 37 H 1.09007 * 109.46485 * 299.99975 * 10 9 8 38 38 H 1.09000 * 109.47124 * 59.99967 * 10 9 8 39 39 H 1.08990 * 109.56607 * 61.87023 * 14 13 11 40 40 H 1.08999 * 109.55651 * 182.19499 * 14 13 11 41 41 H 1.08009 * 120.14052 * 180.02562 * 22 21 20 42 42 H 1.07999 * 119.77473 * 179.97438 * 23 22 21 43 43 H 1.07997 * 119.77335 * 179.97438 * 24 23 22 44 44 H 1.07994 * 120.14398 * 0.25149 * 25 20 18 45 45 H 1.08998 * 109.55766 * 65.31188 * 28 15 14 46 46 H 1.08999 * 109.55623 * 185.52646 * 28 15 14 47 47 H 1.08002 * 120.02542 * 179.97438 * 30 8 6 48 48 H 1.08004 * 119.96692 * 180.27517 * 31 30 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.5965 -2.0340 -1.4480 6 6 2.0558 -2.6876 -2.5762 7 35 1.5983 -4.4982 -2.8732 8 6 2.8529 -2.0135 -3.4907 9 8 3.3064 -2.6537 -4.6007 10 6 4.1224 -1.8978 -5.4978 11 6 4.5334 -2.7793 -6.6789 12 1 5.1554 -2.2026 -7.3634 13 8 5.2706 -3.9061 -6.1987 14 6 5.6790 -4.8101 -7.2300 15 6 4.4366 -5.3040 -7.9793 16 1 3.8160 -5.8962 -7.3069 17 7 4.8464 -6.1235 -9.1224 18 6 5.6093 -5.6839 -10.1396 19 8 6.0609 -4.5623 -10.2537 20 6 5.8083 -6.7953 -11.0936 21 6 5.1038 -7.8929 -10.5593 22 6 5.0950 -9.1018 -11.2366 23 6 5.7803 -9.2229 -12.4353 24 6 6.4713 -8.1463 -12.9593 25 6 6.4884 -6.9309 -12.2932 26 6 4.5046 -7.4128 -9.2962 27 8 3.8185 -8.0722 -8.5415 28 6 3.6428 -4.0905 -8.4756 29 8 3.3639 -3.2322 -7.3652 30 6 3.1870 -0.6854 -3.2695 31 6 2.7216 -0.0356 -2.1428 32 1 -0.3934 0.4417 -0.7651 33 1 1.7923 -0.5139 0.8900 34 1 1.5879 2.4585 -1.2243 35 1 1.5615 2.4679 1.2085 36 1 0.9761 -2.5577 -0.7359 37 1 3.5600 -1.0389 -5.8642 38 1 5.0138 -1.5521 -4.9744 39 1 6.3434 -4.2957 -7.9242 40 1 6.1989 -5.6591 -6.7862 41 1 4.5565 -9.9462 -10.8321 42 1 5.7744 -10.1648 -12.9637 43 1 7.0018 -8.2531 -13.8939 44 1 7.0297 -6.0931 -12.7074 45 1 4.2301 -3.5488 -9.2170 46 1 2.7076 -4.4251 -8.9243 47 1 3.8076 -0.1587 -3.9794 48 1 2.9779 0.9997 -1.9725 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_10154_13594088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:44:23 Heat of formation + Delta-G solvation = -111.921719 kcal Electronic energy + Delta-G solvation = -38969.003840 eV Core-core repulsion = 33583.592125 eV Total energy + Delta-G solvation = -5385.411715 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 476.044 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -43.68217 -41.60539 -41.00364 -39.82538 -39.65434 -39.17065 -37.35863 -37.07267 -36.96556 -34.60070 -33.51003 -32.37554 -32.12173 -31.46305 -30.31760 -29.70770 -27.40860 -26.48801 -26.35085 -25.57495 -24.65207 -23.56767 -23.14289 -22.50971 -22.14126 -21.01832 -19.57426 -19.06069 -19.00778 -18.75308 -18.39916 -17.85531 -17.58180 -17.51520 -16.95731 -16.85172 -16.68675 -16.48028 -16.21426 -16.10930 -16.05612 -15.95425 -15.67465 -15.61546 -15.25117 -15.17208 -14.84936 -14.67154 -14.63380 -14.45928 -14.37123 -14.03038 -13.95948 -13.57267 -13.54595 -13.44175 -12.88141 -12.66055 -12.44869 -12.29706 -12.18489 -12.13326 -12.05051 -11.74306 -11.71268 -11.69070 -11.56075 -11.01893 -10.87764 -10.76484 -10.60644 -10.46192 -10.43009 -9.88818 -9.21989 -4.99988 -1.17354 -0.26951 0.00056 0.17039 0.79799 0.80078 0.91819 1.26599 1.55536 1.66922 1.90117 1.94476 2.24447 2.30892 2.37091 2.37602 2.43291 3.05948 3.21291 3.30913 3.33983 3.35626 3.45046 3.57596 3.64558 3.68248 3.72949 3.77725 3.83413 3.85827 3.95080 4.00804 4.02051 4.06495 4.12712 4.15281 4.17184 4.33310 4.39057 4.49633 4.52887 4.55168 4.61823 4.64561 4.69909 4.86759 4.88312 4.98254 5.01544 5.24786 5.32680 5.40182 5.45853 5.54259 5.80262 5.97369 6.15520 6.39121 6.41889 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.069 4.069 3 Si 0.683 3.317 4 C -0.154 4.154 5 C -0.024 4.024 6 C -0.125 4.125 7 Br -0.029 7.029 8 C 0.165 3.835 9 O -0.278 6.278 10 C 0.073 3.927 11 C 0.246 3.754 12 H 0.087 0.913 13 O -0.367 6.367 14 C 0.049 3.951 15 C 0.074 3.926 16 H 0.130 0.870 17 N -0.570 5.570 18 C 0.576 3.424 19 O -0.460 6.460 20 C -0.143 4.143 21 C -0.140 4.140 22 C -0.042 4.042 23 C -0.092 4.092 24 C -0.094 4.094 25 C -0.042 4.042 26 C 0.575 3.425 27 O -0.451 6.451 28 C 0.048 3.952 29 O -0.368 6.368 30 C -0.202 4.202 31 C -0.060 4.060 32 H 0.376 0.624 33 H 0.120 0.880 34 H -0.259 1.259 35 H -0.255 1.255 36 H 0.143 0.857 37 H 0.092 0.908 38 H 0.093 0.907 39 H 0.074 0.926 40 H 0.110 0.890 41 H 0.145 0.855 42 H 0.145 0.855 43 H 0.145 0.855 44 H 0.144 0.856 45 H 0.075 0.925 46 H 0.109 0.891 47 H 0.140 0.860 48 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.646 0.491 -6.209 8.406 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.179 4.179 3 Si 0.584 3.416 4 C -0.156 4.156 5 C -0.044 4.044 6 C -0.205 4.205 7 Br 0.057 6.943 8 C 0.116 3.884 9 O -0.190 6.190 10 C -0.002 4.002 11 C 0.150 3.850 12 H 0.104 0.896 13 O -0.286 6.286 14 C -0.028 4.028 15 C -0.027 4.027 16 H 0.148 0.852 17 N -0.315 5.315 18 C 0.366 3.634 19 O -0.331 6.331 20 C -0.146 4.146 21 C -0.143 4.143 22 C -0.061 4.061 23 C -0.110 4.110 24 C -0.112 4.112 25 C -0.060 4.060 26 C 0.364 3.636 27 O -0.321 6.321 28 C -0.029 4.029 29 O -0.287 6.287 30 C -0.222 4.222 31 C -0.078 4.078 32 H 0.224 0.776 33 H 0.138 0.862 34 H -0.184 1.184 35 H -0.180 1.180 36 H 0.160 0.840 37 H 0.110 0.890 38 H 0.111 0.889 39 H 0.092 0.908 40 H 0.128 0.872 41 H 0.162 0.838 42 H 0.163 0.837 43 H 0.163 0.837 44 H 0.162 0.838 45 H 0.093 0.907 46 H 0.127 0.873 47 H 0.158 0.842 48 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 5.009 0.487 -5.128 7.185 hybrid contribution -0.688 0.282 -0.916 1.180 sum 4.321 0.770 -6.044 7.469 Atomic orbital electron populations 1.86610 1.17653 1.79906 1.49350 1.24973 0.83994 1.10819 0.98129 0.95117 0.91617 0.74402 0.80432 1.20177 1.02175 0.94770 0.98428 1.20856 0.95816 0.93465 0.94275 1.21130 1.06774 0.93773 0.98827 1.96781 1.92142 1.08725 1.96666 1.18669 0.92432 0.90664 0.86629 1.86351 1.63876 1.38535 1.30225 1.22955 0.95433 0.93477 0.88341 1.23586 0.83252 0.87012 0.91101 0.89624 1.88270 1.72021 1.35413 1.32937 1.23012 0.94276 0.94595 0.90965 1.22654 0.99028 0.93972 0.87085 0.85185 1.46452 1.48936 1.13397 1.22746 1.18453 0.76635 0.87423 0.80905 1.90809 1.46778 1.20361 1.75161 1.20464 1.02488 0.94215 0.97474 1.20475 1.01682 0.96038 0.96126 1.20875 0.96203 0.95604 0.93409 1.21562 0.94985 0.99781 0.94682 1.21558 0.97614 0.91945 1.00055 1.20853 0.95316 0.98399 0.91460 1.18419 0.78996 0.80633 0.85511 1.90864 1.33589 1.59240 1.48423 1.23013 1.01586 0.89461 0.88851 1.88265 1.31337 1.64937 1.44162 1.21170 1.06379 0.93513 1.01093 1.20919 0.94849 0.99391 0.92602 0.77594 0.86211 1.18432 1.18040 0.83962 0.89041 0.88895 0.90791 0.87242 0.83755 0.83692 0.83710 0.83811 0.90726 0.87287 0.84215 0.84716 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.65 12.77 -35.23 -0.45 -1.10 16 2 C -0.07 0.02 2.82 36.01 0.10 0.13 16 3 Si 0.68 -0.90 29.78 -169.99 -5.06 -5.96 16 4 C -0.15 -0.04 5.39 -104.60 -0.56 -0.60 16 5 C -0.02 -0.04 9.35 -39.58 -0.37 -0.41 16 6 C -0.12 -0.37 6.24 -39.38 -0.25 -0.62 16 7 Br -0.03 -0.11 33.16 -68.01 -2.26 -2.37 16 8 C 0.16 0.36 6.68 -39.20 -0.26 0.10 16 9 O -0.28 -0.77 9.26 -39.99 -0.37 -1.14 16 10 C 0.07 -0.04 4.83 37.16 0.18 0.14 16 11 C 0.25 0.16 3.59 37.16 0.13 0.29 16 12 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 13 O -0.37 -0.80 10.43 -63.56 -0.66 -1.46 16 14 C 0.05 0.04 6.33 37.29 0.24 0.28 16 15 C 0.07 0.09 3.07 -67.66 -0.21 -0.11 16 16 H 0.13 0.31 7.60 -51.93 -0.39 -0.08 16 17 N -0.57 -0.65 2.53 -110.22 -0.28 -0.93 16 18 C 0.58 0.62 7.35 -12.45 -0.09 0.53 16 19 O -0.46 -1.19 15.16 5.41 0.08 -1.10 16 20 C -0.14 0.04 6.40 -104.84 -0.67 -0.63 16 21 C -0.14 0.00 6.41 -104.83 -0.67 -0.67 16 22 C -0.04 0.09 10.09 -39.32 -0.40 -0.31 16 23 C -0.09 0.35 10.04 -39.45 -0.40 -0.05 16 24 C -0.09 0.37 10.04 -39.44 -0.40 -0.03 16 25 C -0.04 0.10 10.09 -39.32 -0.40 -0.30 16 26 C 0.58 1.11 8.02 -12.46 -0.10 1.01 16 27 O -0.45 -2.09 17.44 5.41 0.09 -1.99 16 28 C 0.05 0.05 6.32 37.29 0.24 0.28 16 29 O -0.37 -0.83 10.43 -63.56 -0.66 -1.50 16 30 C -0.20 0.06 9.04 -39.44 -0.36 -0.30 16 31 C -0.06 0.04 8.66 -39.60 -0.34 -0.30 16 32 H 0.38 -0.57 8.70 45.56 0.40 -0.17 16 33 H 0.12 -0.12 7.96 -51.93 -0.41 -0.54 16 34 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 35 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 36 H 0.14 0.19 8.06 -52.49 -0.42 -0.23 16 37 H 0.09 -0.22 7.66 -51.93 -0.40 -0.62 16 38 H 0.09 -0.24 7.66 -51.93 -0.40 -0.64 16 39 H 0.07 0.05 6.71 -51.93 -0.35 -0.30 16 40 H 0.11 0.03 8.14 -51.93 -0.42 -0.39 16 41 H 0.14 -0.46 8.06 -52.48 -0.42 -0.88 16 42 H 0.15 -0.89 8.06 -52.49 -0.42 -1.32 16 43 H 0.15 -0.91 8.06 -52.49 -0.42 -1.34 16 44 H 0.14 -0.54 8.06 -52.49 -0.42 -0.96 16 45 H 0.07 0.06 6.63 -51.93 -0.34 -0.29 16 46 H 0.11 0.04 8.14 -51.93 -0.42 -0.38 16 47 H 0.14 -0.41 6.30 -52.49 -0.33 -0.75 16 48 H 0.14 -0.40 4.87 -52.48 -0.26 -0.65 16 LS Contribution 424.74 15.07 6.40 6.40 Total: 0.00 -9.87 424.74 -12.82 -22.68 By element: Atomic # 1 Polarization: -4.89 SS G_CDS: -5.07 Total: -9.96 kcal Atomic # 6 Polarization: 3.01 SS G_CDS: -4.58 Total: -1.57 kcal Atomic # 7 Polarization: -0.65 SS G_CDS: -0.28 Total: -0.93 kcal Atomic # 8 Polarization: -6.33 SS G_CDS: -1.97 Total: -8.30 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.06 Total: -5.96 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.26 Total: -2.37 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -9.87 -12.82 -22.68 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10154_13594088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.239 kcal (2) G-P(sol) polarization free energy of solvation -9.868 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.107 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.815 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.683 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.922 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds