Wall clock time and date at job start Mon Mar 8 2021 12:39:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.53003 * 109.47218 * 2 1 4 4 C 1.53006 * 109.46717 * 240.00596 * 2 1 3 5 5 O 1.45192 * 109.47322 * 120.00477 * 2 1 3 6 6 C 1.34641 * 116.99890 * 59.99853 * 5 2 1 7 7 O 1.21510 * 120.00228 * 0.02562 * 6 5 2 8 8 N 1.34781 * 119.99807 * 180.02562 * 6 5 2 9 9 C 1.46504 * 119.99665 * 179.97438 * 8 6 5 10 10 H 1.08999 * 112.85136 * 336.19533 * 9 8 6 11 11 C 1.53779 * 113.61484 * 107.49929 * 9 8 6 12 12 C 1.53785 * 87.08093 * 89.11287 * 11 9 8 13 13 H 1.09002 * 113.61570 * 270.88522 * 12 11 9 14 14 C 1.52995 * 113.69093 * 139.99088 * 12 11 9 15 15 O 1.42899 * 109.47232 * 85.93436 * 14 12 11 16 16 C 1.35922 * 117.00069 * 179.97438 * 15 14 12 17 17 C 1.38794 * 120.05615 * 179.72642 * 16 15 14 18 18 Br 1.89104 * 120.03792 * 0.02562 * 17 16 15 19 19 C 1.38242 * 119.92609 * 179.77165 * 17 16 15 20 20 C 1.38250 * 120.04339 * 0.48364 * 19 17 16 21 21 C 1.50696 * 119.93994 * 179.76939 * 20 19 17 22 22 O 1.42899 * 109.47026 * 245.02669 * 21 20 19 23 23 Si 1.86302 * 109.47105 * 5.02262 * 21 20 19 24 24 C 1.38285 * 120.11679 * 359.79097 * 20 19 17 25 25 C 1.38143 * 120.06979 * 359.95555 * 24 20 19 26 26 C 1.53781 * 87.08241 * 25.43228 * 12 11 9 27 27 H 1.08997 * 109.46641 * 299.99821 * 1 2 3 28 28 H 1.08998 * 109.46795 * 59.99552 * 1 2 3 29 29 H 1.08995 * 109.47056 * 179.97438 * 1 2 3 30 30 H 1.09003 * 109.46515 * 180.02562 * 3 2 1 31 31 H 1.08998 * 109.47091 * 300.00074 * 3 2 1 32 32 H 1.09000 * 109.46451 * 60.00608 * 3 2 1 33 33 H 1.09004 * 109.47103 * 299.99897 * 4 2 1 34 34 H 1.08998 * 109.47609 * 60.00350 * 4 2 1 35 35 H 1.09009 * 109.46952 * 180.02562 * 4 2 1 36 36 H 0.96996 * 120.00382 * 359.97438 * 8 6 5 37 37 H 1.09003 * 113.61775 * 334.57164 * 11 9 8 38 38 H 1.08996 * 113.61960 * 203.65890 * 11 9 8 39 39 H 1.09005 * 109.47501 * 205.93599 * 14 12 11 40 40 H 1.09004 * 109.47494 * 325.93611 * 14 12 11 41 41 H 1.07993 * 119.97645 * 180.22978 * 19 17 16 42 42 H 1.08994 * 109.47311 * 125.02372 * 21 20 19 43 43 H 0.96699 * 114.00494 * 59.99514 * 22 21 20 44 44 H 1.48503 * 110.00052 * 180.02562 * 23 21 20 45 45 H 1.48508 * 110.00167 * 301.31897 * 23 21 20 46 46 H 1.07997 * 119.95914 * 179.97438 * 24 20 19 47 47 H 1.08007 * 120.01625 * 180.02562 * 25 24 20 48 48 H 1.09005 * 113.61302 * 89.11252 * 26 12 11 49 49 H 1.08996 * 113.61527 * 219.93415 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2494 5 8 2.0140 -0.6845 1.1854 6 6 1.6523 -1.9724 1.3381 7 8 0.9516 -2.5098 0.5033 8 7 2.0673 -2.6656 2.4169 9 6 1.6732 -4.0668 2.5833 10 1 0.7588 -4.3161 2.0449 11 6 2.8211 -5.0620 2.3454 12 6 3.1485 -4.9209 3.8413 13 1 3.8451 -4.1119 4.0614 14 6 3.5382 -6.2395 4.5124 15 8 4.9373 -6.4692 4.3346 16 6 5.4495 -7.6064 4.8750 17 6 6.7998 -7.8954 4.7354 18 35 7.9298 -6.7071 3.7936 19 6 7.3188 -9.0504 5.2901 20 6 6.4919 -9.9217 5.9746 21 6 7.0592 -11.1826 6.5739 22 8 6.4919 -12.3186 5.9183 23 14 8.9090 -11.1977 6.3528 24 6 5.1452 -9.6383 6.1099 25 6 4.6225 -8.4829 5.5619 26 6 1.6737 -4.5371 4.0475 27 1 -0.3632 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3633 -1.0276 -0.0005 30 1 3.1301 1.4424 -0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6768 1.9562 0.8901 33 1 1.6766 -1.7489 -1.2495 34 1 1.6767 -0.2073 -2.1393 35 1 3.1300 -0.7216 -1.2492 36 1 2.6269 -2.2368 3.0831 37 1 3.6026 -4.6786 1.6894 38 1 2.4831 -6.0595 2.0646 39 1 3.3111 -6.1864 5.5772 40 1 2.9756 -7.0570 4.0613 41 1 8.3701 -9.2743 5.1852 42 1 6.8200 -11.2194 7.6366 43 1 6.6653 -12.3514 4.9676 44 1 9.4805 -12.4366 6.9392 45 1 9.2488 -11.1159 4.9095 46 1 4.5015 -10.3209 6.6447 47 1 3.5706 -8.2622 5.6685 48 1 1.0220 -5.3911 4.2320 49 1 1.5288 -3.7309 4.7665 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_10154_15734082.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:39:19 Heat of formation + Delta-G solvation = -88.043914 kcal Electronic energy + Delta-G solvation = -30718.814014 eV Core-core repulsion = 26274.546088 eV Total energy + Delta-G solvation = -4444.267926 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.092 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -41.99600 -41.46571 -40.42119 -39.14744 -37.91464 -37.30137 -35.38815 -34.14959 -33.43633 -32.07112 -30.41337 -29.37557 -28.39576 -28.32713 -26.76195 -26.38454 -24.98571 -23.85150 -22.87479 -22.28442 -21.18929 -20.30106 -19.44103 -19.24919 -18.34231 -17.68092 -17.45480 -17.22268 -17.02039 -16.55288 -16.42634 -16.19564 -15.96763 -15.65708 -15.44040 -15.32957 -15.07572 -14.80869 -14.50465 -14.39431 -14.25710 -13.77845 -13.65770 -13.41021 -13.37588 -13.29590 -13.09972 -12.94669 -12.89553 -12.55524 -12.46918 -12.37738 -12.33938 -12.10311 -11.89164 -11.84306 -11.70746 -11.64045 -11.42478 -11.21644 -11.20154 -11.14621 -10.63538 -10.21017 -9.98413 -9.26285 -4.96184 -0.01228 0.11951 0.64190 1.10789 1.27595 1.55182 1.69300 1.91603 2.02466 2.41473 3.08587 3.39719 3.40673 3.49988 3.52883 3.67546 3.71374 3.75285 3.79504 3.87331 3.89144 3.91678 4.08167 4.25726 4.36925 4.39702 4.45969 4.46229 4.50511 4.58551 4.59462 4.68284 4.73009 4.73776 4.75203 4.80861 4.82201 4.85045 4.87647 4.98600 5.03515 5.06363 5.08588 5.15481 5.24309 5.29261 5.31937 5.45631 5.52260 5.59543 6.23311 6.34706 6.46276 7.29988 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.646 3.354 7 O -0.593 6.593 8 N -0.684 5.684 9 C 0.129 3.871 10 H 0.096 0.904 11 C -0.147 4.147 12 C -0.103 4.103 13 H 0.100 0.900 14 C 0.061 3.939 15 O -0.313 6.313 16 C 0.156 3.844 17 C -0.143 4.143 18 Br -0.046 7.046 19 C -0.057 4.057 20 C -0.152 4.152 21 C -0.065 4.065 22 O -0.545 6.545 23 Si 0.741 3.259 24 C -0.035 4.035 25 C -0.200 4.200 26 C -0.116 4.116 27 H 0.063 0.937 28 H 0.087 0.913 29 H 0.063 0.937 30 H 0.068 0.932 31 H 0.099 0.901 32 H 0.070 0.930 33 H 0.063 0.937 34 H 0.087 0.913 35 H 0.060 0.940 36 H 0.416 0.584 37 H 0.056 0.944 38 H 0.101 0.899 39 H 0.086 0.914 40 H 0.080 0.920 41 H 0.145 0.855 42 H 0.135 0.865 43 H 0.386 0.614 44 H -0.297 1.297 45 H -0.285 1.285 46 H 0.150 0.850 47 H 0.162 0.838 48 H 0.121 0.879 49 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.848 2.165 4.286 5.145 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.399 3.601 7 O -0.484 6.484 8 N -0.343 5.343 9 C 0.025 3.975 10 H 0.114 0.886 11 C -0.185 4.185 12 C -0.121 4.121 13 H 0.118 0.882 14 C -0.014 4.014 15 O -0.226 6.226 16 C 0.108 3.892 17 C -0.222 4.222 18 Br 0.039 6.961 19 C -0.077 4.077 20 C -0.153 4.153 21 C -0.175 4.175 22 O -0.353 6.353 23 Si 0.648 3.352 24 C -0.054 4.054 25 C -0.220 4.220 26 C -0.153 4.153 27 H 0.082 0.918 28 H 0.105 0.895 29 H 0.082 0.918 30 H 0.087 0.913 31 H 0.117 0.883 32 H 0.089 0.911 33 H 0.082 0.918 34 H 0.106 0.894 35 H 0.079 0.921 36 H 0.253 0.747 37 H 0.075 0.925 38 H 0.120 0.880 39 H 0.104 0.896 40 H 0.098 0.902 41 H 0.162 0.838 42 H 0.152 0.848 43 H 0.235 0.765 44 H -0.225 1.225 45 H -0.212 1.212 46 H 0.168 0.832 47 H 0.179 0.821 48 H 0.140 0.860 49 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -1.209 2.074 3.605 4.331 hybrid contribution -0.499 -0.761 -0.720 1.160 sum -1.707 1.313 2.885 3.600 Atomic orbital electron populations 1.22469 0.93879 1.03726 1.03583 1.22365 0.94577 0.92564 0.81427 1.21894 1.02404 0.90860 1.04314 1.22478 1.01542 1.02260 0.97469 1.86311 1.71526 1.23277 1.47304 1.18328 0.78568 0.80729 0.82459 1.90904 1.42320 1.71040 1.44105 1.44389 1.54913 1.11938 1.23101 1.21871 0.98476 0.78034 0.99156 0.88611 1.23557 0.98077 1.00252 0.96661 1.22587 0.97621 0.96682 0.95231 0.88185 1.23167 0.77970 0.98181 1.02048 1.86193 1.27311 1.37063 1.72055 1.18784 0.91306 0.86843 0.92306 1.21119 0.92514 0.99216 1.09399 1.96739 1.63535 1.61422 1.74407 1.20962 1.00225 0.91636 0.94828 1.20181 0.94815 0.97816 1.02512 1.24951 1.09012 0.82940 1.00607 1.86579 1.77089 1.44577 1.27031 0.94278 0.74463 0.85381 0.81103 1.21189 0.94347 0.95045 0.94803 1.21552 1.01318 0.96058 1.03037 1.23315 0.94732 1.02928 0.94373 0.91811 0.89456 0.91760 0.91294 0.88280 0.91062 0.91825 0.89404 0.92122 0.74673 0.92477 0.88013 0.89624 0.90156 0.83765 0.84768 0.76478 1.22472 1.21192 0.83190 0.82051 0.86038 0.88807 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.57 8.37 71.98 0.60 0.03 16 2 C 0.13 0.41 1.13 -10.79 -0.01 0.40 16 3 C -0.14 0.25 8.85 71.98 0.64 0.88 16 4 C -0.18 -0.70 8.37 71.98 0.60 -0.10 16 5 O -0.37 -2.14 9.94 -55.50 -0.55 -2.69 16 6 C 0.65 4.40 8.06 129.79 1.05 5.45 16 7 O -0.59 -7.21 11.48 19.81 0.23 -6.98 16 8 N -0.68 -0.10 5.27 -567.58 -2.99 -3.09 16 9 C 0.13 -0.31 4.32 45.52 0.20 -0.11 16 10 H 0.10 0.09 7.46 -2.39 -0.02 0.08 16 11 C -0.15 0.38 7.43 31.12 0.23 0.62 16 12 C -0.10 0.64 3.88 -10.27 -0.04 0.60 16 13 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 14 C 0.06 -0.37 4.57 71.98 0.33 -0.05 16 15 O -0.31 -0.25 9.47 -92.67 -0.88 -1.13 16 16 C 0.16 0.18 6.68 22.52 0.15 0.33 16 17 C -0.14 -0.43 6.24 22.40 0.14 -0.29 16 18 Br -0.05 -0.22 33.16 -20.37 -0.68 -0.90 16 19 C -0.06 -0.02 8.40 22.27 0.19 0.16 16 20 C -0.15 0.25 5.35 -19.85 -0.11 0.14 16 21 C -0.07 0.16 2.80 71.23 0.20 0.36 16 22 O -0.54 -0.23 12.83 -148.98 -1.91 -2.14 16 23 Si 0.74 -1.25 29.88 68.60 2.05 0.80 16 24 C -0.04 0.11 9.68 22.26 0.22 0.32 16 25 C -0.20 0.61 9.04 22.36 0.20 0.81 16 26 C -0.12 1.02 7.39 31.12 0.23 1.25 16 27 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 28 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 29 H 0.06 0.54 5.88 -2.39 -0.01 0.53 16 30 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 31 H 0.10 -0.50 8.14 -2.39 -0.02 -0.52 16 32 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 33 H 0.06 0.59 5.88 -2.38 -0.01 0.57 16 34 H 0.09 0.03 8.14 -2.39 -0.02 0.01 16 35 H 0.06 0.21 8.14 -2.38 -0.02 0.19 16 36 H 0.42 -1.67 8.81 -92.71 -0.82 -2.49 16 37 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 38 H 0.10 -0.40 7.92 -2.39 -0.02 -0.42 16 39 H 0.09 -0.80 7.66 -2.38 -0.02 -0.82 16 40 H 0.08 -0.68 7.40 -2.39 -0.02 -0.69 16 41 H 0.15 -0.18 4.83 -2.91 -0.01 -0.20 16 42 H 0.13 -0.69 7.96 -2.39 -0.02 -0.71 16 43 H 0.39 -1.70 8.70 -74.06 -0.64 -2.34 16 44 H -0.30 -1.68 7.11 99.48 0.71 -0.97 16 45 H -0.29 -0.82 7.01 99.48 0.70 -0.12 16 46 H 0.15 -0.89 8.06 -2.91 -0.02 -0.91 16 47 H 0.16 -1.34 6.30 -2.91 -0.02 -1.35 16 48 H 0.12 -1.46 8.10 -2.38 -0.02 -1.48 16 49 H 0.09 -0.95 8.14 -2.39 -0.02 -0.97 16 Total: 0.00 -18.24 413.10 -0.36 -18.60 By element: Atomic # 1 Polarization: -12.85 SS G_CDS: -0.45 Total: -13.30 kcal Atomic # 6 Polarization: 6.01 SS G_CDS: 4.81 Total: 10.82 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -2.99 Total: -3.09 kcal Atomic # 8 Polarization: -9.82 SS G_CDS: -3.11 Total: -12.94 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: 2.05 Total: 0.80 kcal Atomic # 35 Polarization: -0.22 SS G_CDS: -0.68 Total: -0.90 kcal Total: -18.24 -0.36 -18.60 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10154_15734082.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.443 kcal (2) G-P(sol) polarization free energy of solvation -18.237 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.680 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.364 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.601 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.044 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds