Wall clock time and date at job start Mon Mar 8 2021 12:22:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52996 * 109.46862 * 2 1 4 4 C 1.52997 * 109.47296 * 239.99834 * 2 1 3 5 5 O 1.42897 * 109.46917 * 119.99566 * 2 1 3 6 6 C 1.42902 * 114.00175 * 60.00569 * 5 2 1 7 7 H 1.08997 * 112.84985 * 18.79740 * 6 5 2 8 8 C 1.53774 * 113.61646 * 149.99836 * 6 5 2 9 9 C 1.53784 * 87.08403 * 139.98106 * 8 6 5 10 10 H 1.08995 * 113.61235 * 89.20000 * 9 8 6 11 11 C 1.52999 * 113.61241 * 220.02098 * 9 8 6 12 12 O 1.42905 * 109.46728 * 184.99897 * 11 9 8 13 13 C 1.35905 * 116.99842 * 179.97438 * 12 11 9 14 14 C 1.38705 * 120.47482 * 179.97438 * 13 12 11 15 15 C 1.50702 * 119.65556 * 0.02668 * 14 13 12 16 16 O 1.42894 * 109.47267 * 29.99409 * 15 14 13 17 17 Si 1.86302 * 109.47205 * 149.99915 * 15 14 13 18 18 N 1.31846 * 120.68718 * 179.97438 * 14 13 12 19 19 C 1.31848 * 121.77881 * 0.02562 * 18 14 13 20 20 C 1.38251 * 120.88338 * 0.02562 * 19 18 14 21 21 C 1.38536 * 119.22670 * 359.68691 * 20 19 18 22 22 C 1.53778 * 87.07717 * 334.56680 * 9 8 6 23 23 H 1.08994 * 109.47737 * 299.99816 * 1 2 3 24 24 H 1.09001 * 109.47237 * 60.00370 * 1 2 3 25 25 H 1.09004 * 109.46730 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.47206 * 180.02562 * 3 2 1 27 27 H 1.09001 * 109.46892 * 299.99841 * 3 2 1 28 28 H 1.08999 * 109.47495 * 59.99522 * 3 2 1 29 29 H 1.09004 * 109.47222 * 299.99687 * 4 2 1 30 30 H 1.09001 * 109.47144 * 59.99739 * 4 2 1 31 31 H 1.08998 * 109.47189 * 179.97438 * 4 2 1 32 32 H 1.08999 * 113.61743 * 25.42987 * 8 6 5 33 33 H 1.09004 * 113.68986 * 254.53691 * 8 6 5 34 34 H 1.09000 * 109.47486 * 64.99835 * 11 9 8 35 35 H 1.09001 * 109.47362 * 304.99112 * 11 9 8 36 36 H 1.09000 * 109.46736 * 269.99411 * 15 14 13 37 37 H 0.96705 * 113.99894 * 60.00604 * 16 15 14 38 38 H 1.48499 * 110.00012 * 58.67793 * 17 15 14 39 39 H 1.48499 * 110.00031 * 179.97438 * 17 15 14 40 40 H 1.07995 * 119.55374 * 179.97438 * 19 18 14 41 41 H 1.08004 * 120.38404 * 179.97438 * 20 19 18 42 42 H 1.07994 * 120.81481 * 180.29675 * 21 20 19 43 43 H 1.09003 * 113.61683 * 139.98396 * 22 9 8 44 44 H 1.09008 * 113.61715 * 270.88359 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0063 -0.6735 1.1668 6 6 1.5847 -2.0355 1.2646 7 1 1.2523 -2.4452 0.3108 8 6 2.5837 -2.9377 2.0080 9 6 1.3667 -3.6119 2.6633 10 1 0.9746 -4.4541 2.0933 11 6 1.5712 -3.9400 4.1437 12 8 0.4399 -4.6639 4.6317 13 6 0.4622 -5.0355 5.9388 14 6 -0.5986 -5.7404 6.4880 15 6 -1.7830 -6.0961 5.6267 16 8 -1.3551 -6.2628 4.2736 17 14 -2.5412 -7.6841 6.2385 18 7 -0.5811 -6.1035 7.7553 19 6 0.4336 -5.8150 8.5463 20 6 1.5266 -5.1141 8.0715 21 6 1.5518 -4.7185 6.7440 22 6 0.6077 -2.2962 2.4232 23 1 -0.3634 0.5138 0.8899 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 3.1299 1.4426 -0.0005 27 1 1.6766 1.9563 -0.8900 28 1 1.6765 1.9564 0.8899 29 1 1.6768 -1.7490 -1.2491 30 1 1.6767 -0.2075 -2.1392 31 1 3.1300 -0.7209 -1.2494 32 1 3.2171 -2.3996 2.7132 33 1 3.1486 -3.5996 1.3515 34 1 1.6821 -3.0147 4.7090 35 1 2.4690 -4.5471 4.2606 36 1 -2.5226 -5.2970 5.6781 37 1 -0.6951 -6.9593 4.1527 38 1 -2.9615 -7.5337 7.6548 39 1 -3.7107 -8.0455 5.3978 40 1 0.4101 -6.1297 9.5791 41 1 2.3532 -4.8817 8.7266 42 1 2.3948 -4.1741 6.3449 43 1 -0.4237 -2.4397 2.1007 44 1 0.7008 -1.5826 3.2419 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_10177732_14598384.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:22:06 Heat of formation + Delta-G solvation = -56.206372 kcal Electronic energy + Delta-G solvation = -24194.206548 eV Core-core repulsion = 20693.583155 eV Total energy + Delta-G solvation = -3500.623392 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.166 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.84744 -40.91641 -39.31203 -38.04271 -37.57931 -33.92036 -33.43049 -31.84511 -29.46555 -28.41533 -28.31486 -27.24724 -26.65280 -24.72653 -23.44396 -22.83115 -20.84939 -20.65348 -19.19656 -18.39782 -17.89994 -17.62567 -17.09785 -16.78105 -16.56827 -16.01571 -15.99657 -15.64204 -15.31616 -14.96884 -14.63970 -14.57241 -14.19321 -14.14931 -13.84883 -13.51101 -13.42635 -13.36267 -13.12857 -12.97569 -12.80026 -12.67743 -12.66543 -12.25365 -12.24464 -11.96584 -11.75885 -11.71860 -11.40118 -11.22038 -10.97867 -10.63575 -10.36136 -10.16970 -9.26174 -4.80835 0.03098 0.24386 1.49928 1.92332 2.04818 2.24492 2.71568 2.74851 3.18979 3.41401 3.43072 3.52826 3.69655 3.73331 3.79515 3.83717 3.86903 3.94165 4.01380 4.05730 4.09311 4.19115 4.23156 4.35520 4.45667 4.48114 4.54407 4.62412 4.69860 4.72337 4.73928 4.75592 4.79478 4.86595 4.89464 4.98858 5.00616 5.04888 5.08214 5.13176 5.27327 5.29062 5.34014 5.44476 6.25813 6.39840 6.64505 6.95600 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.362 6.362 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.128 4.128 9 C -0.105 4.105 10 H 0.107 0.893 11 C 0.066 3.934 12 O -0.278 6.278 13 C 0.102 3.898 14 C 0.063 3.937 15 C -0.052 4.052 16 O -0.524 6.524 17 Si 0.715 3.285 18 N -0.443 5.443 19 C 0.063 3.937 20 C -0.128 4.128 21 C -0.169 4.169 22 C -0.147 4.147 23 H 0.064 0.936 24 H 0.066 0.934 25 H 0.059 0.941 26 H 0.063 0.937 27 H 0.070 0.930 28 H 0.063 0.937 29 H 0.059 0.941 30 H 0.067 0.933 31 H 0.065 0.935 32 H 0.092 0.908 33 H 0.077 0.923 34 H 0.063 0.937 35 H 0.064 0.936 36 H 0.118 0.882 37 H 0.374 0.626 38 H -0.249 1.249 39 H -0.263 1.263 40 H 0.162 0.838 41 H 0.140 0.860 42 H 0.140 0.860 43 H 0.073 0.927 44 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.006 -0.503 -1.413 4.278 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.281 6.281 6 C 0.004 3.996 7 H 0.110 0.890 8 C -0.165 4.165 9 C -0.123 4.123 10 H 0.125 0.875 11 C -0.010 4.010 12 O -0.190 6.190 13 C 0.053 3.947 14 C -0.077 4.077 15 C -0.163 4.163 16 O -0.327 6.327 17 Si 0.615 3.385 18 N -0.155 5.155 19 C -0.094 4.094 20 C -0.148 4.148 21 C -0.196 4.196 22 C -0.185 4.185 23 H 0.083 0.917 24 H 0.085 0.915 25 H 0.078 0.922 26 H 0.082 0.918 27 H 0.089 0.911 28 H 0.082 0.918 29 H 0.078 0.922 30 H 0.086 0.914 31 H 0.084 0.916 32 H 0.110 0.890 33 H 0.096 0.904 34 H 0.081 0.919 35 H 0.082 0.918 36 H 0.136 0.864 37 H 0.221 0.779 38 H -0.173 1.173 39 H -0.188 1.188 40 H 0.179 0.821 41 H 0.157 0.843 42 H 0.158 0.842 43 H 0.091 0.909 44 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 2.129 -0.780 -0.900 2.440 hybrid contribution 1.009 1.241 -0.235 1.616 sum 3.138 0.460 -1.134 3.368 Atomic orbital electron populations 1.22473 0.95458 1.02587 1.02899 1.21533 0.93249 0.93245 0.85373 1.21770 1.01981 0.93257 1.02616 1.22471 1.02298 1.00890 0.97991 1.88029 1.73837 1.23328 1.42926 1.23573 0.95606 0.82780 0.97641 0.88966 1.23238 0.96398 0.97364 0.99512 1.22270 0.98283 0.98164 0.93624 0.87484 1.22892 0.87875 0.95495 0.94717 1.86359 1.42271 1.69381 1.20943 1.19815 0.94675 0.95126 0.85037 1.21366 0.95913 0.98748 0.91655 1.24893 0.95997 1.11079 0.84358 1.86548 1.62789 1.60465 1.22903 0.94235 0.82615 0.81812 0.79804 1.67246 1.26705 1.18472 1.03049 1.22622 0.89398 0.97469 0.99869 1.22048 0.99825 0.97518 0.95364 1.21800 0.98927 1.03713 0.95111 1.23597 0.99194 0.96256 0.99408 0.91704 0.91528 0.92229 0.91772 0.91061 0.91786 0.92190 0.91351 0.91611 0.88953 0.90395 0.91908 0.91757 0.86444 0.77931 1.17327 1.18836 0.82117 0.84257 0.84195 0.90853 0.89325 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.04 8.38 37.16 0.31 0.35 16 2 C 0.10 0.03 1.11 -90.62 -0.10 -0.07 16 3 C -0.14 0.02 8.84 37.16 0.33 0.35 16 4 C -0.18 0.12 8.38 37.16 0.31 0.43 16 5 O -0.36 -0.61 10.00 -35.23 -0.35 -0.96 16 6 C 0.06 -0.01 2.82 -25.92 -0.07 -0.08 16 7 H 0.09 -0.07 5.54 -51.93 -0.29 -0.36 16 8 C -0.13 0.15 7.47 -25.92 -0.19 -0.04 16 9 C -0.10 0.10 4.01 -89.81 -0.36 -0.26 16 10 H 0.11 -0.10 8.14 -51.93 -0.42 -0.53 16 11 C 0.07 -0.05 4.60 37.16 0.17 0.12 16 12 O -0.28 -0.38 7.87 -42.30 -0.33 -0.72 16 13 C 0.10 0.17 6.56 -39.07 -0.26 -0.09 16 14 C 0.06 0.15 6.09 -82.41 -0.50 -0.35 16 15 C -0.05 -0.10 2.92 36.01 0.11 0.01 16 16 O -0.52 -0.77 10.63 -58.08 -0.62 -1.39 16 17 Si 0.71 0.85 31.89 -169.99 -5.42 -4.57 16 18 N -0.44 -1.21 8.37 -9.35 -0.08 -1.29 16 19 C 0.06 0.04 11.18 -17.54 -0.20 -0.15 16 20 C -0.13 0.06 10.11 -39.47 -0.40 -0.34 16 21 C -0.17 -0.02 9.14 -39.14 -0.36 -0.38 16 22 C -0.15 -0.01 7.46 -25.92 -0.19 -0.20 16 23 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 24 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 25 H 0.06 -0.02 7.02 -51.93 -0.36 -0.38 16 26 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 27 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 28 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 29 H 0.06 -0.06 6.24 -51.93 -0.32 -0.38 16 30 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.09 -0.08 8.10 -51.93 -0.42 -0.50 16 33 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 34 H 0.06 -0.06 7.41 -51.93 -0.38 -0.44 16 35 H 0.06 -0.13 7.68 -51.93 -0.40 -0.53 16 36 H 0.12 0.29 7.96 -51.93 -0.41 -0.12 16 37 H 0.37 -0.70 8.70 45.56 0.40 -0.31 16 38 H -0.25 -1.07 7.11 56.52 0.40 -0.66 16 39 H -0.26 -0.97 7.11 56.52 0.40 -0.57 16 40 H 0.16 -0.28 8.06 -52.49 -0.42 -0.70 16 41 H 0.14 -0.42 8.06 -52.48 -0.42 -0.84 16 42 H 0.14 -0.25 6.45 -52.49 -0.34 -0.59 16 43 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 44 H 0.09 0.08 7.90 -51.92 -0.41 -0.33 16 LS Contribution 352.59 15.07 5.31 5.31 Total: 0.00 -5.61 352.59 -10.11 -15.72 By element: Atomic # 1 Polarization: -4.18 SS G_CDS: -7.22 Total: -11.40 kcal Atomic # 6 Polarization: 0.70 SS G_CDS: -1.40 Total: -0.71 kcal Atomic # 7 Polarization: -1.21 SS G_CDS: -0.08 Total: -1.29 kcal Atomic # 8 Polarization: -1.76 SS G_CDS: -1.30 Total: -3.06 kcal Atomic # 14 Polarization: 0.85 SS G_CDS: -5.42 Total: -4.57 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -5.61 -10.11 -15.72 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10177732_14598384.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.491 kcal (2) G-P(sol) polarization free energy of solvation -5.606 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.097 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.110 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.716 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.206 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds