Wall clock time and date at job start Mon Mar 8 2021 13:04:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52997 * 109.47092 * 2 1 4 4 C 1.53002 * 109.47454 * 239.99992 * 2 1 3 5 5 O 1.45206 * 109.47129 * 119.99823 * 2 1 3 6 6 C 1.34636 * 117.00048 * 60.00363 * 5 2 1 7 7 O 1.21514 * 119.99573 * 359.97438 * 6 5 2 8 8 N 1.34774 * 120.00282 * 179.97438 * 6 5 2 9 9 C 1.46497 * 120.00206 * 179.97438 * 8 6 5 10 10 H 1.09004 * 112.84770 * 25.33791 * 9 8 6 11 11 C 1.53781 * 113.61469 * 156.53036 * 9 8 6 12 12 C 1.53777 * 87.08063 * 89.11741 * 11 9 8 13 13 H 1.09003 * 113.61572 * 270.88266 * 12 11 9 14 14 C 1.53008 * 113.61606 * 140.06545 * 12 11 9 15 15 O 1.42900 * 109.46930 * 174.99857 * 14 12 11 16 16 C 1.35910 * 116.99564 * 180.02562 * 15 14 12 17 17 C 1.38706 * 120.47216 * 179.72455 * 16 15 14 18 18 C 1.50692 * 119.66010 * 359.97438 * 17 16 15 19 19 O 1.42908 * 109.46977 * 29.99981 * 18 17 16 20 20 Si 1.86301 * 109.47432 * 149.99876 * 18 17 16 21 21 N 1.31853 * 120.68009 * 179.70033 * 17 16 15 22 22 C 1.31849 * 121.78213 * 0.58992 * 21 17 16 23 23 C 1.38251 * 120.88265 * 359.70239 * 22 21 17 24 24 C 1.38535 * 119.22576 * 359.97438 * 23 22 21 25 25 C 1.53781 * 113.61422 * 254.14023 * 9 8 6 26 26 H 1.09004 * 109.47059 * 299.99666 * 1 2 3 27 27 H 1.08992 * 109.47060 * 60.00150 * 1 2 3 28 28 H 1.09004 * 109.46930 * 180.02562 * 1 2 3 29 29 H 1.09001 * 109.47375 * 179.97438 * 3 2 1 30 30 H 1.09002 * 109.47045 * 299.99867 * 3 2 1 31 31 H 1.09000 * 109.47140 * 59.99774 * 3 2 1 32 32 H 1.09004 * 109.47006 * 299.99897 * 4 2 1 33 33 H 1.09002 * 109.46838 * 59.99394 * 4 2 1 34 34 H 1.08992 * 109.47056 * 180.02562 * 4 2 1 35 35 H 0.97003 * 119.99726 * 0.02562 * 8 6 5 36 36 H 1.09000 * 113.61796 * 203.66689 * 11 9 8 37 37 H 1.09004 * 113.61270 * 334.57087 * 11 9 8 38 38 H 1.08995 * 109.46785 * 295.00092 * 14 12 11 39 39 H 1.09001 * 109.46752 * 54.99958 * 14 12 11 40 40 H 1.09002 * 109.47495 * 270.00248 * 18 17 16 41 41 H 0.96695 * 114.00026 * 60.00159 * 19 18 17 42 42 H 1.48495 * 110.00169 * 180.02562 * 20 18 17 43 43 H 1.48500 * 109.99932 * 301.32073 * 20 18 17 44 44 H 1.07993 * 119.55369 * 179.72341 * 22 21 17 45 45 H 1.08000 * 120.38892 * 179.97438 * 23 22 21 46 46 H 1.08006 * 120.81410 * 179.97438 * 24 23 22 47 47 H 1.08996 * 113.61753 * 25.43114 * 25 9 8 48 48 H 1.09007 * 113.61376 * 156.33851 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6524 -1.9723 1.3384 7 8 0.9510 -2.5094 0.5040 8 7 2.0681 -2.6657 2.4167 9 6 1.6741 -4.0668 2.5832 10 1 1.4467 -4.5579 1.6370 11 6 2.6275 -4.8723 3.4816 12 6 1.7557 -4.4305 4.6688 13 1 2.0711 -3.4875 5.1152 14 6 1.5288 -5.5322 5.7061 15 8 0.8109 -4.9973 6.8199 16 6 0.5261 -5.8513 7.8380 17 6 -0.1627 -5.4070 8.9570 18 6 -0.5967 -3.9664 9.0421 19 8 -0.8423 -3.4644 7.7269 20 14 -2.1565 -3.8465 10.0538 21 7 -0.4464 -6.2333 9.9445 22 6 -0.0816 -7.5001 9.9164 23 6 0.6130 -8.0148 8.8376 24 6 0.9259 -7.1826 7.7752 25 6 0.5993 -4.2804 3.6621 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8899 28 1 -0.3633 -1.0277 0.0005 29 1 3.1300 1.4425 0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6766 1.9563 0.8900 32 1 1.6768 -1.7490 -1.2492 33 1 1.6767 -0.2074 -2.1392 34 1 3.1300 -0.7216 -1.2489 35 1 2.6277 -2.2368 3.0829 36 1 2.6002 -5.9459 3.2955 37 1 3.6412 -4.4725 3.5117 38 1 0.9525 -6.3410 5.2569 39 1 2.4912 -5.9162 6.0446 40 1 0.1892 -3.3774 9.5149 41 1 -1.5318 -3.9421 7.2459 42 1 -2.5953 -2.4308 10.1448 43 1 -3.2267 -4.6707 9.4369 44 1 -0.3291 -8.1441 10.7472 45 1 0.9082 -9.0536 8.8231 46 1 1.4680 -7.5576 6.9196 47 1 -0.0234 -3.4033 3.8378 48 1 0.0184 -5.1927 3.5252 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_10177732_15734082.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:04:46 Heat of formation + Delta-G solvation = -85.046397 kcal Electronic energy + Delta-G solvation = -29603.224771 eV Core-core repulsion = 25433.478919 eV Total energy + Delta-G solvation = -4169.745852 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -41.99127 -41.74938 -40.56794 -39.01449 -37.77587 -37.66252 -35.25812 -34.09447 -33.48022 -31.88022 -29.47059 -28.31621 -28.27735 -27.29175 -26.91515 -25.19582 -23.83138 -23.41992 -22.70566 -21.08776 -20.42717 -19.30641 -19.19347 -18.42108 -17.92306 -17.53232 -17.28305 -17.04612 -16.80415 -16.62785 -16.11977 -15.95964 -15.46390 -15.41597 -15.30582 -15.10887 -14.84111 -14.47722 -14.36077 -13.89863 -13.87189 -13.76198 -13.50587 -13.40435 -13.15866 -13.09348 -12.84509 -12.81584 -12.56368 -12.38391 -12.29405 -12.24478 -12.05639 -11.79843 -11.75725 -11.37642 -11.28377 -11.02386 -10.96478 -10.73132 -10.37393 -10.18602 -9.31467 -4.62293 -0.01336 0.19190 1.16081 1.48186 1.84808 1.87267 1.99915 2.10333 2.69397 3.09666 3.14475 3.22933 3.32738 3.33589 3.59635 3.62805 3.72715 3.77283 3.78810 3.84502 3.97742 3.98287 4.05976 4.15297 4.22739 4.28358 4.42995 4.45377 4.51496 4.53863 4.57802 4.64215 4.69937 4.75064 4.79267 4.85279 4.88661 4.93073 4.94224 4.94874 4.99799 5.00456 5.10337 5.33579 5.37584 5.39264 5.49260 5.61579 6.19600 6.40602 6.48318 6.89607 7.42785 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.653 3.347 7 O -0.565 6.565 8 N -0.695 5.695 9 C 0.138 3.862 10 H 0.110 0.890 11 C -0.136 4.136 12 C -0.107 4.107 13 H 0.105 0.895 14 C 0.062 3.938 15 O -0.280 6.280 16 C 0.098 3.902 17 C 0.064 3.936 18 C -0.061 4.061 19 O -0.513 6.513 20 Si 0.720 3.280 21 N -0.436 5.436 22 C 0.065 3.935 23 C -0.129 4.129 24 C -0.169 4.169 25 C -0.145 4.145 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.407 0.593 36 H 0.102 0.898 37 H 0.082 0.918 38 H 0.064 0.936 39 H 0.064 0.936 40 H 0.123 0.877 41 H 0.371 0.629 42 H -0.261 1.261 43 H -0.268 1.268 44 H 0.164 0.836 45 H 0.140 0.860 46 H 0.140 0.860 47 H 0.079 0.921 48 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.054 -2.846 0.925 4.276 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.407 3.593 7 O -0.453 6.453 8 N -0.354 5.354 9 C 0.034 3.966 10 H 0.128 0.872 11 C -0.174 4.174 12 C -0.125 4.125 13 H 0.123 0.877 14 C -0.013 4.013 15 O -0.191 6.191 16 C 0.050 3.950 17 C -0.075 4.075 18 C -0.171 4.171 19 O -0.317 6.317 20 Si 0.621 3.379 21 N -0.147 5.147 22 C -0.091 4.091 23 C -0.149 4.149 24 C -0.195 4.195 25 C -0.183 4.183 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.106 0.894 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.242 0.758 36 H 0.120 0.880 37 H 0.101 0.899 38 H 0.083 0.917 39 H 0.082 0.918 40 H 0.141 0.859 41 H 0.218 0.782 42 H -0.187 1.187 43 H -0.193 1.193 44 H 0.182 0.818 45 H 0.158 0.842 46 H 0.158 0.842 47 H 0.097 0.903 48 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 1.835 -1.837 1.273 2.892 hybrid contribution 0.834 -0.782 -1.681 2.033 sum 2.669 -2.619 -0.408 3.761 Atomic orbital electron populations 1.22525 0.93829 1.05065 1.02742 1.22126 0.94464 0.91559 0.81805 1.21882 1.02335 0.92344 1.03370 1.22524 1.01602 1.03443 0.96555 1.86309 1.71485 1.23352 1.46780 1.18052 0.78632 0.80653 0.81964 1.90918 1.40769 1.70390 1.43265 1.44350 1.55456 1.11793 1.23768 1.21734 0.95688 0.79610 0.99608 0.87230 1.23366 0.98826 1.01277 0.93935 1.22670 0.97840 0.99206 0.92817 0.87714 1.22938 0.95765 0.96835 0.85772 1.86359 1.70778 1.35590 1.26374 1.19825 0.95729 0.89567 0.89890 1.21323 0.99010 0.97592 0.89567 1.24863 1.11529 0.89837 0.90890 1.86649 1.60370 1.58652 1.26037 0.93802 0.74493 0.79225 0.90413 1.66961 1.18153 1.04354 1.25259 1.22659 0.96855 0.91196 0.98427 1.22055 0.97926 1.01130 0.93756 1.21792 1.03559 0.92948 1.01216 1.23588 0.96643 1.03419 0.94696 0.92094 0.90909 0.89424 0.91384 0.89904 0.91370 0.89440 0.90903 0.92111 0.75774 0.87952 0.89902 0.91747 0.91811 0.85928 0.78198 1.18685 1.19298 0.81843 0.84190 0.84214 0.90269 0.88754 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.32 8.37 37.16 0.31 -0.01 16 2 C 0.14 0.23 1.13 -90.62 -0.10 0.12 16 3 C -0.14 0.05 8.85 37.16 0.33 0.38 16 4 C -0.18 -0.28 8.37 37.16 0.31 0.03 16 5 O -0.36 -1.02 9.94 -40.31 -0.40 -1.42 16 6 C 0.65 1.99 8.06 54.05 0.44 2.42 16 7 O -0.56 -2.98 11.50 -19.28 -0.22 -3.20 16 8 N -0.70 -0.07 5.27 -57.93 -0.31 -0.37 16 9 C 0.14 -0.15 4.30 -67.12 -0.29 -0.44 16 10 H 0.11 0.02 7.50 -51.93 -0.39 -0.37 16 11 C -0.14 0.46 7.38 -25.92 -0.19 0.26 16 12 C -0.11 0.24 3.90 -89.66 -0.35 -0.11 16 13 H 0.10 -0.15 8.14 -51.93 -0.42 -0.58 16 14 C 0.06 -0.12 4.60 37.16 0.17 0.05 16 15 O -0.28 -0.25 7.87 -42.31 -0.33 -0.58 16 16 C 0.10 0.12 6.56 -39.07 -0.26 -0.14 16 17 C 0.06 0.12 6.09 -82.41 -0.50 -0.38 16 18 C -0.06 -0.09 2.92 36.00 0.11 0.01 16 19 O -0.51 -1.18 10.63 -58.09 -0.62 -1.79 16 20 Si 0.72 0.94 31.88 -169.99 -5.42 -4.48 16 21 N -0.44 -0.72 8.36 -9.36 -0.08 -0.80 16 22 C 0.07 -0.02 11.18 -17.54 -0.20 -0.21 16 23 C -0.13 0.15 10.11 -39.47 -0.40 -0.25 16 24 C -0.17 0.08 9.14 -39.14 -0.36 -0.27 16 25 C -0.14 0.19 7.45 -25.77 -0.19 0.00 16 26 H 0.06 0.10 8.14 -51.93 -0.42 -0.33 16 27 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 28 H 0.09 0.34 5.88 -51.93 -0.31 0.03 16 29 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.09 0.31 5.88 -51.93 -0.31 0.01 16 33 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 35 H 0.41 -0.67 8.81 -40.82 -0.36 -1.03 16 36 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 37 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 38 H 0.06 -0.19 7.41 -51.93 -0.38 -0.57 16 39 H 0.06 -0.17 7.70 -51.93 -0.40 -0.57 16 40 H 0.12 0.11 7.96 -51.93 -0.41 -0.30 16 41 H 0.37 0.09 8.70 45.56 0.40 0.49 16 42 H -0.26 -0.98 7.11 56.52 0.40 -0.58 16 43 H -0.27 -1.04 7.11 56.52 0.40 -0.64 16 44 H 0.16 -0.47 8.06 -52.49 -0.42 -0.89 16 45 H 0.14 -0.51 8.06 -52.49 -0.42 -0.94 16 46 H 0.14 -0.37 6.45 -52.48 -0.34 -0.71 16 47 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 48 H 0.09 -0.19 7.91 -51.93 -0.41 -0.60 16 LS Contribution 387.91 15.07 5.85 5.85 Total: 0.00 -7.23 387.91 -10.30 -17.54 By element: Atomic # 1 Polarization: -4.61 SS G_CDS: -7.60 Total: -12.21 kcal Atomic # 6 Polarization: 2.65 SS G_CDS: -1.17 Total: 1.48 kcal Atomic # 7 Polarization: -0.79 SS G_CDS: -0.38 Total: -1.17 kcal Atomic # 8 Polarization: -5.43 SS G_CDS: -1.57 Total: -7.00 kcal Atomic # 14 Polarization: 0.94 SS G_CDS: -5.42 Total: -4.48 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -7.23 -10.30 -17.54 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10177732_15734082.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.511 kcal (2) G-P(sol) polarization free energy of solvation -7.231 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.743 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.304 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.535 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.046 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds