Wall clock time and date at job start Mon Mar 8 2021 13:04:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52997 * 109.47092 * 2 1 4 4 C 1.53002 * 109.47454 * 239.99992 * 2 1 3 5 5 O 1.45206 * 109.47129 * 119.99823 * 2 1 3 6 6 C 1.34636 * 117.00048 * 60.00363 * 5 2 1 7 7 O 1.21514 * 119.99573 * 359.97438 * 6 5 2 8 8 N 1.34774 * 120.00282 * 179.97438 * 6 5 2 9 9 C 1.46497 * 120.00206 * 179.97438 * 8 6 5 10 10 H 1.09004 * 112.84770 * 25.33791 * 9 8 6 11 11 C 1.53781 * 113.61469 * 156.53036 * 9 8 6 12 12 C 1.53777 * 87.08063 * 89.11741 * 11 9 8 13 13 H 1.09003 * 113.61572 * 270.88266 * 12 11 9 14 14 C 1.53008 * 113.61606 * 140.06545 * 12 11 9 15 15 O 1.42900 * 109.46930 * 174.99857 * 14 12 11 16 16 C 1.35910 * 116.99564 * 180.02562 * 15 14 12 17 17 C 1.38706 * 120.47216 * 179.72455 * 16 15 14 18 18 C 1.50692 * 119.66010 * 359.97438 * 17 16 15 19 19 O 1.42908 * 109.46977 * 29.99981 * 18 17 16 20 20 Si 1.86301 * 109.47432 * 149.99876 * 18 17 16 21 21 N 1.31853 * 120.68009 * 179.70033 * 17 16 15 22 22 C 1.31849 * 121.78213 * 0.58992 * 21 17 16 23 23 C 1.38251 * 120.88265 * 359.70239 * 22 21 17 24 24 C 1.38535 * 119.22576 * 359.97438 * 23 22 21 25 25 C 1.53781 * 113.61422 * 254.14023 * 9 8 6 26 26 H 1.09004 * 109.47059 * 299.99666 * 1 2 3 27 27 H 1.08992 * 109.47060 * 60.00150 * 1 2 3 28 28 H 1.09004 * 109.46930 * 180.02562 * 1 2 3 29 29 H 1.09001 * 109.47375 * 179.97438 * 3 2 1 30 30 H 1.09002 * 109.47045 * 299.99867 * 3 2 1 31 31 H 1.09000 * 109.47140 * 59.99774 * 3 2 1 32 32 H 1.09004 * 109.47006 * 299.99897 * 4 2 1 33 33 H 1.09002 * 109.46838 * 59.99394 * 4 2 1 34 34 H 1.08992 * 109.47056 * 180.02562 * 4 2 1 35 35 H 0.97003 * 119.99726 * 0.02562 * 8 6 5 36 36 H 1.09000 * 113.61796 * 203.66689 * 11 9 8 37 37 H 1.09004 * 113.61270 * 334.57087 * 11 9 8 38 38 H 1.08995 * 109.46785 * 295.00092 * 14 12 11 39 39 H 1.09001 * 109.46752 * 54.99958 * 14 12 11 40 40 H 1.09002 * 109.47495 * 270.00248 * 18 17 16 41 41 H 0.96695 * 114.00026 * 60.00159 * 19 18 17 42 42 H 1.48495 * 110.00169 * 180.02562 * 20 18 17 43 43 H 1.48500 * 109.99932 * 301.32073 * 20 18 17 44 44 H 1.07993 * 119.55369 * 179.72341 * 22 21 17 45 45 H 1.08000 * 120.38892 * 179.97438 * 23 22 21 46 46 H 1.08006 * 120.81410 * 179.97438 * 24 23 22 47 47 H 1.08996 * 113.61753 * 25.43114 * 25 9 8 48 48 H 1.09007 * 113.61376 * 156.33851 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6524 -1.9723 1.3384 7 8 0.9510 -2.5094 0.5040 8 7 2.0681 -2.6657 2.4167 9 6 1.6741 -4.0668 2.5832 10 1 1.4467 -4.5579 1.6370 11 6 2.6275 -4.8723 3.4816 12 6 1.7557 -4.4305 4.6688 13 1 2.0711 -3.4875 5.1152 14 6 1.5288 -5.5322 5.7061 15 8 0.8109 -4.9973 6.8199 16 6 0.5261 -5.8513 7.8380 17 6 -0.1627 -5.4070 8.9570 18 6 -0.5967 -3.9664 9.0421 19 8 -0.8423 -3.4644 7.7269 20 14 -2.1565 -3.8465 10.0538 21 7 -0.4464 -6.2333 9.9445 22 6 -0.0816 -7.5001 9.9164 23 6 0.6130 -8.0148 8.8376 24 6 0.9259 -7.1826 7.7752 25 6 0.5993 -4.2804 3.6621 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8899 28 1 -0.3633 -1.0277 0.0005 29 1 3.1300 1.4425 0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6766 1.9563 0.8900 32 1 1.6768 -1.7490 -1.2492 33 1 1.6767 -0.2074 -2.1392 34 1 3.1300 -0.7216 -1.2489 35 1 2.6277 -2.2368 3.0829 36 1 2.6002 -5.9459 3.2955 37 1 3.6412 -4.4725 3.5117 38 1 0.9525 -6.3410 5.2569 39 1 2.4912 -5.9162 6.0446 40 1 0.1892 -3.3774 9.5149 41 1 -1.5318 -3.9421 7.2459 42 1 -2.5953 -2.4308 10.1448 43 1 -3.2267 -4.6707 9.4369 44 1 -0.3291 -8.1441 10.7472 45 1 0.9082 -9.0536 8.8231 46 1 1.4680 -7.5576 6.9196 47 1 -0.0234 -3.4033 3.8378 48 1 0.0184 -5.1927 3.5252 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_10177732_15734082.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:04:45 Heat of formation + Delta-G solvation = -81.810941 kcal Electronic energy + Delta-G solvation = -29603.084471 eV Core-core repulsion = 25433.478919 eV Total energy + Delta-G solvation = -4169.605552 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.03742 -41.78601 -40.52496 -38.98177 -37.90226 -37.79274 -35.41060 -34.15361 -33.42866 -31.84611 -29.37519 -28.41572 -28.34680 -27.31421 -26.76094 -25.16899 -23.85504 -23.40049 -22.67658 -21.21188 -20.34786 -19.39159 -19.20602 -18.44092 -17.91202 -17.63156 -17.29304 -17.15431 -16.79590 -16.62478 -16.16595 -15.94830 -15.51303 -15.42034 -15.32881 -15.14897 -14.82495 -14.49196 -14.39800 -14.03984 -13.83161 -13.65149 -13.41260 -13.39377 -13.18885 -13.07848 -12.96764 -12.91615 -12.61409 -12.51879 -12.37638 -12.24673 -12.05849 -11.83755 -11.72579 -11.44696 -11.24838 -11.17218 -11.03170 -10.68537 -10.41509 -10.23460 -9.28693 -4.77666 0.03299 0.25073 1.08499 1.36135 1.66057 1.66941 1.90607 2.10126 2.73445 3.06091 3.16825 3.28839 3.36938 3.49025 3.69358 3.72040 3.73938 3.76962 3.80143 3.89689 3.91358 4.10489 4.23631 4.28624 4.38841 4.43656 4.44942 4.49136 4.56576 4.57306 4.66987 4.70197 4.71744 4.72008 4.78631 4.82974 4.84960 4.96082 5.01094 5.02722 5.04336 5.10800 5.13290 5.22377 5.27227 5.43034 5.50863 5.57187 6.28850 6.31817 6.42230 6.92608 7.27258 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.179 4.179 5 O -0.371 6.371 6 C 0.646 3.354 7 O -0.592 6.592 8 N -0.685 5.685 9 C 0.129 3.871 10 H 0.096 0.904 11 C -0.116 4.116 12 C -0.100 4.100 13 H 0.095 0.905 14 C 0.059 3.941 15 O -0.297 6.297 16 C 0.086 3.914 17 C 0.041 3.959 18 C -0.063 4.063 19 O -0.526 6.526 20 Si 0.785 3.215 21 N -0.454 5.454 22 C 0.055 3.945 23 C -0.124 4.124 24 C -0.171 4.171 25 C -0.144 4.144 26 H 0.059 0.941 27 H 0.088 0.912 28 H 0.063 0.937 29 H 0.070 0.930 30 H 0.099 0.901 31 H 0.068 0.932 32 H 0.064 0.936 33 H 0.087 0.913 34 H 0.063 0.937 35 H 0.416 0.584 36 H 0.122 0.878 37 H 0.092 0.908 38 H 0.077 0.923 39 H 0.077 0.923 40 H 0.126 0.874 41 H 0.377 0.623 42 H -0.297 1.297 43 H -0.304 1.304 44 H 0.187 0.813 45 H 0.169 0.831 46 H 0.162 0.838 47 H 0.056 0.944 48 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.412 -3.994 1.010 6.036 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.400 3.600 7 O -0.483 6.483 8 N -0.344 5.344 9 C 0.025 3.975 10 H 0.114 0.886 11 C -0.154 4.154 12 C -0.119 4.119 13 H 0.113 0.887 14 C -0.016 4.016 15 O -0.209 6.209 16 C 0.037 3.963 17 C -0.098 4.098 18 C -0.173 4.173 19 O -0.331 6.331 20 Si 0.691 3.309 21 N -0.166 5.166 22 C -0.102 4.102 23 C -0.144 4.144 24 C -0.197 4.197 25 C -0.183 4.183 26 H 0.078 0.922 27 H 0.107 0.893 28 H 0.082 0.918 29 H 0.089 0.911 30 H 0.118 0.882 31 H 0.087 0.913 32 H 0.083 0.917 33 H 0.106 0.894 34 H 0.082 0.918 35 H 0.252 0.748 36 H 0.140 0.860 37 H 0.110 0.890 38 H 0.095 0.905 39 H 0.095 0.905 40 H 0.143 0.857 41 H 0.225 0.775 42 H -0.225 1.225 43 H -0.231 1.231 44 H 0.204 0.796 45 H 0.187 0.813 46 H 0.180 0.820 47 H 0.075 0.925 48 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 3.221 -2.985 1.381 4.604 hybrid contribution 0.371 -0.463 -1.736 1.834 sum 3.593 -3.448 -0.354 4.992 Atomic orbital electron populations 1.22480 0.94167 1.03672 1.03470 1.22367 0.94380 0.92624 0.81534 1.21898 1.02528 0.90858 1.04231 1.22472 1.01703 1.02243 0.97246 1.86314 1.71565 1.23266 1.47386 1.18314 0.78580 0.80785 0.82370 1.90902 1.42074 1.70904 1.44421 1.44401 1.54839 1.12140 1.23033 1.21869 0.97101 0.79178 0.99380 0.88584 1.23318 0.98457 1.01931 0.91725 1.22578 0.97384 0.99016 0.92876 0.88658 1.23098 0.96387 0.97034 0.85098 1.86334 1.71246 1.36356 1.26954 1.19936 0.96092 0.90423 0.89829 1.21291 1.00419 0.97557 0.90492 1.24899 1.11519 0.90457 0.90413 1.86617 1.60752 1.59154 1.26550 0.93075 0.72823 0.75584 0.89406 1.66905 1.18905 1.05298 1.25510 1.23168 0.96648 0.90828 0.99583 1.22414 0.96695 1.02376 0.92895 1.22112 1.03208 0.92237 1.02150 1.23585 0.96716 1.02826 0.95174 0.92177 0.89333 0.91800 0.91059 0.88205 0.91342 0.91743 0.89384 0.91812 0.74752 0.86005 0.88969 0.90480 0.90474 0.85686 0.77506 1.22528 1.23106 0.79602 0.81336 0.82010 0.92511 0.87931 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.82 8.37 71.98 0.60 -0.21 16 2 C 0.13 0.50 1.13 -10.79 -0.01 0.49 16 3 C -0.14 0.16 8.85 71.98 0.64 0.79 16 4 C -0.18 -0.66 8.37 71.98 0.60 -0.06 16 5 O -0.37 -2.48 9.94 -55.45 -0.55 -3.03 16 6 C 0.65 4.95 8.06 129.79 1.05 6.00 16 7 O -0.59 -7.56 11.50 19.80 0.23 -7.33 16 8 N -0.68 -0.85 5.27 -567.61 -2.99 -3.84 16 9 C 0.13 -0.19 4.30 45.52 0.20 0.00 16 10 H 0.10 0.15 7.50 -2.39 -0.02 0.13 16 11 C -0.12 0.90 7.38 31.12 0.23 1.13 16 12 C -0.10 0.48 3.90 -10.17 -0.04 0.44 16 13 H 0.10 -0.25 8.14 -2.39 -0.02 -0.27 16 14 C 0.06 -0.28 4.60 71.98 0.33 0.05 16 15 O -0.30 -0.56 7.87 -70.68 -0.56 -1.12 16 16 C 0.09 0.20 6.56 22.60 0.15 0.35 16 17 C 0.04 0.18 6.09 42.66 0.26 0.44 16 18 C -0.06 -0.27 2.92 71.23 0.21 -0.06 16 19 O -0.53 -3.22 10.63 -127.13 -1.35 -4.57 16 20 Si 0.79 3.33 31.88 68.60 2.19 5.51 16 21 N -0.45 -1.55 8.36 -183.51 -1.53 -3.09 16 22 C 0.05 -0.08 11.18 84.69 0.95 0.86 16 23 C -0.12 0.52 10.11 22.34 0.23 0.74 16 24 C -0.17 0.42 9.14 22.56 0.21 0.63 16 25 C -0.14 0.26 7.45 31.21 0.23 0.49 16 26 H 0.06 0.26 8.14 -2.39 -0.02 0.24 16 27 H 0.09 0.07 8.14 -2.39 -0.02 0.05 16 28 H 0.06 0.63 5.88 -2.38 -0.01 0.61 16 29 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 30 H 0.10 -0.46 8.14 -2.39 -0.02 -0.48 16 31 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 32 H 0.06 0.57 5.88 -2.38 -0.01 0.56 16 33 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 34 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 35 H 0.42 -1.10 8.81 -92.71 -0.82 -1.91 16 36 H 0.12 -1.36 8.10 -2.39 -0.02 -1.38 16 37 H 0.09 -0.82 8.14 -2.38 -0.02 -0.84 16 38 H 0.08 -0.57 7.41 -2.39 -0.02 -0.59 16 39 H 0.08 -0.57 7.70 -2.39 -0.02 -0.59 16 40 H 0.13 0.38 7.96 -2.39 -0.02 0.36 16 41 H 0.38 0.88 8.70 -74.06 -0.64 0.24 16 42 H -0.30 -2.91 7.11 99.48 0.71 -2.20 16 43 H -0.30 -3.03 7.11 99.48 0.71 -2.33 16 44 H 0.19 -1.35 8.06 -2.91 -0.02 -1.37 16 45 H 0.17 -1.74 8.06 -2.91 -0.02 -1.77 16 46 H 0.16 -1.25 6.45 -2.91 -0.02 -1.27 16 47 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 48 H 0.10 -0.37 7.91 -2.38 -0.02 -0.39 16 Total: 0.00 -19.30 387.91 0.80 -18.50 By element: Atomic # 1 Polarization: -12.66 SS G_CDS: -0.45 Total: -13.11 kcal Atomic # 6 Polarization: 6.25 SS G_CDS: 5.82 Total: 12.07 kcal Atomic # 7 Polarization: -2.40 SS G_CDS: -4.52 Total: -6.92 kcal Atomic # 8 Polarization: -13.82 SS G_CDS: -2.23 Total: -16.05 kcal Atomic # 14 Polarization: 3.33 SS G_CDS: 2.19 Total: 5.51 kcal Total: -19.30 0.80 -18.50 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10177732_15734082.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.314 kcal (2) G-P(sol) polarization free energy of solvation -19.301 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.804 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.497 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.811 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds