Wall clock time and date at job start Mon Mar 8 2021 13:04:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53000 * 109.47035 * 2 1 4 4 C 1.52993 * 109.47312 * 240.00053 * 2 1 3 5 5 O 1.45200 * 109.47032 * 119.99743 * 2 1 3 6 6 C 1.34633 * 117.00039 * 60.00357 * 5 2 1 7 7 O 1.21512 * 119.99772 * 359.97438 * 6 5 2 8 8 N 1.34773 * 120.00371 * 179.97438 * 6 5 2 9 9 C 1.46501 * 120.00122 * 179.97438 * 8 6 5 10 10 H 1.08993 * 112.90929 * 336.25213 * 9 8 6 11 11 C 1.53962 * 113.66387 * 107.55425 * 9 8 6 12 12 C 1.53782 * 87.11063 * 139.88885 * 11 9 8 13 13 H 1.08996 * 113.68722 * 89.19879 * 12 11 9 14 14 C 1.53003 * 113.61259 * 220.08801 * 12 11 9 15 15 O 1.42901 * 109.47045 * 272.50005 * 14 12 11 16 16 C 1.35911 * 116.99864 * 180.02562 * 15 14 12 17 17 C 1.38703 * 120.47141 * 179.72207 * 16 15 14 18 18 C 1.50701 * 119.65956 * 359.97438 * 17 16 15 19 19 O 1.42897 * 109.46709 * 329.99817 * 18 17 16 20 20 Si 1.86302 * 109.47021 * 209.99913 * 18 17 16 21 21 N 1.31851 * 120.67879 * 179.69788 * 17 16 15 22 22 C 1.31844 * 121.78241 * 0.59055 * 21 17 16 23 23 C 1.38260 * 120.88407 * 359.69847 * 22 21 17 24 24 C 1.38533 * 119.22188 * 0.02562 * 23 22 21 25 25 C 1.53781 * 87.08260 * 334.63747 * 12 11 9 26 26 H 1.09004 * 109.47089 * 300.00250 * 1 2 3 27 27 H 1.08995 * 109.47372 * 59.99926 * 1 2 3 28 28 H 1.08996 * 109.47428 * 180.02562 * 1 2 3 29 29 H 1.09001 * 109.47473 * 180.02562 * 3 2 1 30 30 H 1.09004 * 109.47329 * 300.00375 * 3 2 1 31 31 H 1.09004 * 109.47386 * 59.99932 * 3 2 1 32 32 H 1.09002 * 109.46800 * 300.00344 * 4 2 1 33 33 H 1.09000 * 109.47248 * 59.99428 * 4 2 1 34 34 H 1.08992 * 109.47507 * 180.02562 * 4 2 1 35 35 H 0.97002 * 120.00080 * 0.02562 * 8 6 5 36 36 H 1.08997 * 113.53543 * 25.33559 * 11 9 8 37 37 H 1.08998 * 113.73879 * 254.47157 * 11 9 8 38 38 H 1.08994 * 109.47052 * 32.49864 * 14 12 11 39 39 H 1.09002 * 109.46569 * 152.49796 * 14 12 11 40 40 H 1.08996 * 109.47211 * 89.99822 * 18 17 16 41 41 H 0.96708 * 113.99848 * 180.02562 * 19 18 17 42 42 H 1.48506 * 109.99734 * 298.68165 * 20 18 17 43 43 H 1.48503 * 110.00070 * 59.99435 * 20 18 17 44 44 H 1.07995 * 119.55846 * 179.67717 * 22 21 17 45 45 H 1.07997 * 120.38704 * 180.02562 * 23 22 21 46 46 H 1.07999 * 120.81367 * 180.02562 * 24 23 22 47 47 H 1.09002 * 113.61445 * 139.98212 * 25 12 11 48 48 H 1.09002 * 113.61408 * 270.79943 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9509 -2.5094 0.5040 8 7 2.0680 -2.6656 2.4167 9 6 1.6739 -4.0668 2.5832 10 1 0.7598 -4.3173 2.0450 11 6 2.8225 -5.0642 2.3455 12 6 2.2747 -5.8603 3.5418 13 1 1.5251 -6.6026 3.2675 14 6 3.3660 -6.4265 4.4525 15 8 3.7768 -7.7056 3.9654 16 6 4.7469 -8.3501 4.6659 17 6 5.1958 -9.5983 4.2604 18 6 4.6017 -10.2424 3.0343 19 8 3.2467 -9.8152 2.8812 20 14 4.6513 -12.0954 3.2205 21 7 6.1408 -10.2247 4.9335 22 6 6.6853 -9.7028 6.0150 23 6 6.2858 -8.4651 6.4840 24 6 5.2994 -7.7701 5.8035 25 6 1.6755 -4.5374 4.0473 26 1 -0.3633 0.5139 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3634 -1.0276 0.0005 29 1 3.1300 1.4426 -0.0005 30 1 1.6766 1.9564 -0.8900 31 1 1.6766 1.9564 0.8900 32 1 1.6766 -1.7489 -1.2492 33 1 1.6766 -0.2074 -2.1392 34 1 3.1299 -0.7216 -1.2490 35 1 2.6276 -2.2368 3.0829 36 1 3.8110 -4.6392 2.5196 37 1 2.7518 -5.5969 1.3972 38 1 4.2201 -5.7493 4.4605 39 1 2.9760 -6.5313 5.4650 40 1 5.1764 -9.9500 2.1556 41 1 2.8003 -10.1917 2.1103 42 1 6.0575 -12.5555 3.3488 43 1 3.8713 -12.5070 4.4153 44 1 7.4533 -10.2496 6.5417 45 1 6.7376 -8.0450 7.3705 46 1 4.9682 -6.8012 6.1470 47 1 0.6776 -4.6443 4.4726 48 1 2.3500 -3.9691 4.6878 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_10177732_15734236.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:04:51 Heat of formation + Delta-G solvation = -85.098697 kcal Electronic energy + Delta-G solvation = -29335.948692 eV Core-core repulsion = 25166.200572 eV Total energy + Delta-G solvation = -4169.748120 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -41.91242 -41.70281 -40.50470 -38.95428 -37.75426 -37.54741 -35.30268 -34.22151 -33.54294 -31.93541 -29.39474 -28.32360 -28.28057 -27.29093 -26.88728 -25.22500 -23.85619 -23.13906 -22.20352 -21.38060 -20.56913 -19.21899 -18.94163 -18.58769 -17.95045 -17.48888 -17.26716 -17.07236 -16.94744 -16.62407 -16.22441 -15.76717 -15.53925 -15.37971 -15.28482 -14.97838 -14.57287 -14.50872 -14.29666 -13.85240 -13.81460 -13.67941 -13.42385 -13.38979 -13.11168 -12.87685 -12.82212 -12.80935 -12.63609 -12.48120 -12.39400 -12.22947 -12.10661 -11.85246 -11.81309 -11.42729 -11.28786 -10.97250 -10.94691 -10.64947 -10.18188 -10.14375 -9.23231 -4.77722 -0.00090 0.22636 1.20300 1.48617 1.88087 1.91767 2.05096 2.34144 2.68931 2.93953 3.12871 3.27474 3.35993 3.52376 3.62723 3.63663 3.74514 3.78473 3.84036 3.95256 3.97899 4.02880 4.10501 4.14299 4.17719 4.30928 4.35713 4.47508 4.53789 4.56959 4.58711 4.63576 4.65917 4.75034 4.78640 4.82739 4.88191 4.93416 4.93876 4.96176 5.01246 5.07418 5.11368 5.34346 5.37410 5.39996 5.49444 5.61083 6.25391 6.42299 6.74788 6.86650 7.43589 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.366 6.366 6 C 0.650 3.350 7 O -0.565 6.565 8 N -0.702 5.702 9 C 0.141 3.859 10 H 0.123 0.877 11 C -0.145 4.145 12 C -0.101 4.101 13 H 0.112 0.888 14 C 0.064 3.936 15 O -0.269 6.269 16 C 0.112 3.888 17 C 0.102 3.898 18 C -0.057 4.057 19 O -0.533 6.533 20 Si 0.710 3.290 21 N -0.449 5.449 22 C 0.062 3.938 23 C -0.127 4.127 24 C -0.172 4.172 25 C -0.137 4.137 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.059 0.941 35 H 0.406 0.594 36 H 0.086 0.914 37 H 0.081 0.919 38 H 0.061 0.939 39 H 0.064 0.936 40 H 0.080 0.920 41 H 0.382 0.618 42 H -0.249 1.249 43 H -0.264 1.264 44 H 0.163 0.837 45 H 0.141 0.859 46 H 0.142 0.858 47 H 0.085 0.915 48 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.155 2.402 0.503 2.459 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.281 6.281 6 C 0.404 3.596 7 O -0.454 6.454 8 N -0.360 5.360 9 C 0.037 3.963 10 H 0.141 0.859 11 C -0.184 4.184 12 C -0.120 4.120 13 H 0.130 0.870 14 C -0.012 4.012 15 O -0.180 6.180 16 C 0.063 3.937 17 C -0.036 4.036 18 C -0.167 4.167 19 O -0.338 6.338 20 Si 0.610 3.390 21 N -0.161 5.161 22 C -0.095 4.095 23 C -0.147 4.147 24 C -0.198 4.198 25 C -0.175 4.175 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.106 0.894 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.241 0.759 36 H 0.104 0.896 37 H 0.099 0.901 38 H 0.080 0.920 39 H 0.082 0.918 40 H 0.098 0.902 41 H 0.230 0.770 42 H -0.173 1.173 43 H -0.189 1.189 44 H 0.180 0.820 45 H 0.159 0.841 46 H 0.159 0.841 47 H 0.104 0.896 48 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 0.315 1.052 0.594 1.249 hybrid contribution 0.414 1.915 1.165 2.280 sum 0.729 2.967 1.759 3.526 Atomic orbital electron populations 1.22522 0.93831 1.05063 1.02708 1.22114 0.94453 0.91544 0.81876 1.21881 1.02315 0.92386 1.03334 1.22520 1.01592 1.03483 0.96540 1.86305 1.71517 1.23516 1.46747 1.18167 0.78624 0.80534 0.82287 1.90916 1.40943 1.70511 1.43041 1.44753 1.55345 1.12197 1.23743 1.22544 0.99400 0.77486 0.96858 0.85912 1.23626 0.98762 0.96663 0.99362 1.22286 0.97677 0.95918 0.96148 0.86967 1.22885 0.97071 0.83259 0.97964 1.86368 1.50450 1.31371 1.49812 1.19733 0.89853 0.92629 0.91494 1.20090 0.95260 0.90270 0.97996 1.24348 0.85912 1.10923 0.95499 1.86511 1.22404 1.73377 1.51519 0.95996 0.82155 0.74413 0.86474 1.66959 1.07870 1.34053 1.07184 1.22583 0.99864 0.94105 0.92946 1.22027 0.96634 0.95530 1.00518 1.21807 0.99723 1.01972 0.96313 1.23407 1.02593 0.95364 0.96174 0.92141 0.90917 0.89408 0.91420 0.89921 0.91410 0.89393 0.90919 0.92146 0.75910 0.89573 0.90058 0.92034 0.91804 0.90229 0.77025 1.17331 1.18881 0.82011 0.84077 0.84073 0.89616 0.89117 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.25 8.37 37.16 0.31 0.06 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.09 8.85 37.16 0.33 0.42 16 4 C -0.18 -0.26 8.37 37.15 0.31 0.05 16 5 O -0.37 -0.90 9.94 -40.31 -0.40 -1.30 16 6 C 0.65 1.79 8.06 54.05 0.44 2.23 16 7 O -0.57 -2.87 11.48 -19.28 -0.22 -3.09 16 8 N -0.70 0.20 5.36 -57.84 -0.31 -0.11 16 9 C 0.14 -0.16 4.25 -67.02 -0.28 -0.44 16 10 H 0.12 0.03 7.47 -51.93 -0.39 -0.36 16 11 C -0.15 0.18 7.44 -25.82 -0.19 -0.01 16 12 C -0.10 0.20 4.01 -89.80 -0.36 -0.16 16 13 H 0.11 -0.15 8.14 -51.93 -0.42 -0.58 16 14 C 0.06 -0.07 4.60 37.16 0.17 0.10 16 15 O -0.27 -0.58 7.87 -42.31 -0.33 -0.91 16 16 C 0.11 0.34 6.56 -39.08 -0.26 0.08 16 17 C 0.10 0.42 6.11 -82.41 -0.50 -0.08 16 18 C -0.06 -0.10 2.91 36.01 0.10 0.01 16 19 O -0.53 -0.53 10.61 -58.08 -0.62 -1.15 16 20 Si 0.71 0.86 31.89 -169.99 -5.42 -4.56 16 21 N -0.45 -2.06 8.38 -9.35 -0.08 -2.13 16 22 C 0.06 0.13 11.18 -17.54 -0.20 -0.07 16 23 C -0.13 -0.06 10.11 -39.46 -0.40 -0.46 16 24 C -0.17 -0.17 9.14 -39.14 -0.36 -0.53 16 25 C -0.14 0.43 7.39 -25.92 -0.19 0.23 16 26 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 27 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 28 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 29 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 32 H 0.09 0.31 5.88 -51.93 -0.31 0.01 16 33 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 34 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 35 H 0.41 -0.96 8.84 -40.82 -0.36 -1.32 16 36 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 37 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.06 -0.13 7.40 -51.93 -0.38 -0.51 16 39 H 0.06 -0.11 7.70 -51.93 -0.40 -0.51 16 40 H 0.08 0.03 7.96 -51.93 -0.41 -0.38 16 41 H 0.38 -1.51 8.74 45.56 0.40 -1.12 16 42 H -0.25 -1.08 7.11 56.52 0.40 -0.68 16 43 H -0.26 -1.36 7.11 56.52 0.40 -0.95 16 44 H 0.16 -0.09 8.06 -52.49 -0.42 -0.51 16 45 H 0.14 -0.34 8.06 -52.49 -0.42 -0.76 16 46 H 0.14 -0.22 6.45 -52.49 -0.34 -0.56 16 47 H 0.09 -0.28 8.14 -51.93 -0.42 -0.71 16 48 H 0.09 -0.39 8.07 -51.93 -0.42 -0.80 16 LS Contribution 388.05 15.07 5.85 5.85 Total: 0.00 -9.39 388.05 -10.31 -19.70 By element: Atomic # 1 Polarization: -6.21 SS G_CDS: -7.60 Total: -13.80 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: -1.18 Total: 1.51 kcal Atomic # 7 Polarization: -1.86 SS G_CDS: -0.39 Total: -2.25 kcal Atomic # 8 Polarization: -4.88 SS G_CDS: -1.57 Total: -6.45 kcal Atomic # 14 Polarization: 0.86 SS G_CDS: -5.42 Total: -4.56 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -9.39 -10.31 -19.70 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10177732_15734236.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.402 kcal (2) G-P(sol) polarization free energy of solvation -9.385 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.787 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.311 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.697 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.099 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds