Wall clock time and date at job start Mon Mar 8 2021 13:59:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42895 * 114.00677 * 2 1 4 4 C 1.53003 * 112.84549 * 65.74987 * 3 2 1 5 5 F 1.39904 * 109.47086 * 54.06889 * 4 3 2 6 6 F 1.39907 * 109.46904 * 174.06613 * 4 3 2 7 7 F 1.39892 * 109.47339 * 294.06637 * 4 3 2 8 8 C 1.53778 * 113.61505 * 294.55744 * 3 2 1 9 9 C 1.53780 * 87.08077 * 270.79641 * 8 3 2 10 10 H 1.09000 * 113.61312 * 220.01876 * 9 8 3 11 11 C 1.52998 * 113.61499 * 89.11582 * 9 8 3 12 12 O 1.42900 * 109.47015 * 175.00078 * 11 9 8 13 13 C 1.35911 * 116.99784 * 179.97438 * 12 11 9 14 14 C 1.38707 * 120.47230 * 179.72090 * 13 12 11 15 15 C 1.50700 * 119.65966 * 0.02562 * 14 13 12 16 16 O 1.42898 * 109.47000 * 330.00059 * 15 14 13 17 17 Si 1.86297 * 109.47125 * 209.99640 * 15 14 13 18 18 N 1.31845 * 120.68033 * 179.70296 * 14 13 12 19 19 C 1.31847 * 121.78282 * 0.58910 * 18 14 13 20 20 C 1.38254 * 120.88462 * 359.69927 * 19 18 14 21 21 C 1.38534 * 119.22191 * 0.02562 * 20 19 18 22 22 C 1.53778 * 113.61635 * 196.94542 * 3 2 1 23 23 H 1.09001 * 109.46860 * 304.12581 * 1 2 3 24 24 H 1.08999 * 109.46888 * 64.12016 * 1 2 3 25 25 H 1.08997 * 109.47800 * 184.12267 * 1 2 3 26 26 H 1.08999 * 113.61538 * 25.34486 * 8 3 2 27 27 H 1.09002 * 113.61596 * 156.24741 * 8 3 2 28 28 H 1.09003 * 109.46951 * 295.00228 * 11 9 8 29 29 H 1.08997 * 109.47081 * 54.99729 * 11 9 8 30 30 H 1.09007 * 109.46978 * 89.99634 * 15 14 13 31 31 H 0.96698 * 114.00019 * 179.97438 * 16 15 14 32 32 H 1.48498 * 110.00036 * 298.67759 * 17 15 14 33 33 H 1.48499 * 110.00000 * 60.00189 * 17 15 14 34 34 H 1.08002 * 119.55610 * 179.72733 * 19 18 14 35 35 H 1.08003 * 120.38952 * 180.02562 * 20 19 18 36 36 H 1.08002 * 120.81507 * 179.97438 * 21 20 19 37 37 H 1.09005 * 113.61438 * 203.74642 * 22 3 2 38 38 H 1.08996 * 113.61882 * 334.65233 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3053 0.0000 4 6 1.7230 2.0836 1.2856 5 9 2.1220 1.3232 2.3901 6 9 2.4320 3.2896 1.2690 7 9 0.3524 2.3496 1.3732 8 6 1.7260 2.1063 -1.2816 9 6 3.0052 1.4808 -1.8623 10 1 3.6037 2.1770 -2.4499 11 6 2.7663 0.1498 -2.5778 12 8 3.9844 -0.2925 -3.1802 13 6 3.9449 -1.4687 -3.8601 14 6 5.0844 -1.9627 -4.4777 15 6 6.3743 -1.1881 -4.3923 16 8 6.0858 0.2080 -4.2935 17 14 7.3915 -1.5055 -5.9205 18 7 5.0522 -3.1061 -5.1334 19 6 3.9457 -3.8152 -5.2388 20 6 2.7687 -3.3849 -4.6550 21 6 2.7594 -2.1913 -3.9518 22 6 3.4922 1.3197 -0.4107 23 1 -0.3633 0.5765 0.8507 24 1 -0.3633 0.4486 -0.9246 25 1 -0.3634 -1.0249 0.0739 26 1 0.8164 1.7976 -1.7966 27 1 1.7909 3.1858 -1.1452 28 1 2.4262 -0.5941 -1.8573 29 1 2.0071 0.2827 -3.3485 30 1 6.9320 -1.5071 -3.5118 31 1 6.8714 0.7687 -4.2344 32 1 7.7251 -2.9492 -6.0177 33 1 6.6421 -1.0748 -7.1280 34 1 3.9590 -4.7450 -5.7882 35 1 1.8669 -3.9724 -4.7460 36 1 1.8543 -1.8307 -3.4859 37 1 4.0408 2.1839 -0.0358 38 1 4.0064 0.3770 -0.2237 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_10177732_17321600.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:59:43 Heat of formation + Delta-G solvation = -183.496016 kcal Electronic energy + Delta-G solvation = -28467.220371 eV Core-core repulsion = 23863.790597 eV Total energy + Delta-G solvation = -4603.429774 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.107 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -51.22042 -48.77945 -48.63912 -41.97654 -41.34540 -39.05734 -37.57348 -37.15439 -33.53095 -32.07727 -30.41686 -28.35342 -27.44676 -27.28388 -26.92894 -24.28206 -23.42312 -22.80795 -20.69063 -19.86318 -19.51678 -19.26511 -19.02790 -18.52608 -17.66179 -17.39197 -17.25709 -16.77765 -16.59517 -16.11926 -15.85926 -15.58748 -15.54626 -15.46131 -15.28841 -15.12736 -14.88045 -14.85898 -14.82152 -14.54016 -14.21955 -13.94675 -13.79987 -13.63281 -13.35339 -13.14155 -12.79746 -12.60402 -12.40320 -12.01519 -11.99338 -11.82756 -11.76396 -10.96569 -10.89824 -10.64111 -10.17362 -9.22071 -4.78051 0.01372 0.24155 1.48560 1.51458 1.90071 1.93491 1.99412 2.34193 2.50415 2.58358 2.70129 2.82209 2.94425 3.21818 3.31507 3.42726 3.52547 3.58865 3.79731 3.96934 4.02993 4.04162 4.08819 4.13818 4.21609 4.24239 4.30876 4.33262 4.36403 4.45975 4.54267 4.61877 4.65920 4.69400 4.89575 4.97082 5.03172 5.40100 5.56509 6.25405 6.74125 6.87555 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.002 3.998 2 O -0.334 6.334 3 C 0.039 3.961 4 C 0.438 3.562 5 F -0.174 7.174 6 F -0.174 7.174 7 F -0.181 7.181 8 C -0.144 4.144 9 C -0.093 4.093 10 H 0.109 0.891 11 C 0.063 3.937 12 O -0.270 6.270 13 C 0.114 3.886 14 C 0.102 3.898 15 C -0.056 4.056 16 O -0.533 6.533 17 Si 0.710 3.290 18 N -0.449 5.449 19 C 0.062 3.938 20 C -0.127 4.127 21 C -0.170 4.170 22 C -0.109 4.109 23 H 0.063 0.937 24 H 0.054 0.946 25 H 0.100 0.900 26 H 0.093 0.907 27 H 0.114 0.886 28 H 0.081 0.919 29 H 0.063 0.937 30 H 0.080 0.920 31 H 0.382 0.618 32 H -0.248 1.248 33 H -0.264 1.264 34 H 0.163 0.837 35 H 0.141 0.859 36 H 0.142 0.858 37 H 0.115 0.885 38 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.429 1.434 -0.540 1.591 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 O -0.252 6.252 3 C -0.003 4.003 4 C 0.383 3.617 5 F -0.155 7.155 6 F -0.156 7.156 7 F -0.163 7.163 8 C -0.182 4.182 9 C -0.111 4.111 10 H 0.128 0.872 11 C -0.013 4.013 12 O -0.181 6.181 13 C 0.065 3.935 14 C -0.036 4.036 15 C -0.167 4.167 16 O -0.338 6.338 17 Si 0.609 3.391 18 N -0.161 5.161 19 C -0.095 4.095 20 C -0.147 4.147 21 C -0.196 4.196 22 C -0.146 4.146 23 H 0.082 0.918 24 H 0.072 0.928 25 H 0.118 0.882 26 H 0.111 0.889 27 H 0.132 0.868 28 H 0.099 0.901 29 H 0.082 0.918 30 H 0.098 0.902 31 H 0.229 0.771 32 H -0.173 1.173 33 H -0.189 1.189 34 H 0.180 0.820 35 H 0.159 0.841 36 H 0.159 0.841 37 H 0.133 0.867 38 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 0.005 0.487 -1.628 1.700 hybrid contribution -2.140 0.225 1.204 2.466 sum -2.136 0.712 -0.424 2.291 Atomic orbital electron populations 1.23283 0.79519 1.04504 1.02039 1.88078 1.21188 1.22019 1.93882 1.24048 1.00137 0.86253 0.89907 1.21233 0.74211 0.78736 0.87508 1.93224 1.90378 1.75426 1.56489 1.93190 1.78477 1.47222 1.96700 1.93144 1.32139 1.94159 1.96825 1.23622 0.99652 1.01270 0.93650 1.22035 0.97250 0.96368 0.95452 0.87234 1.22794 0.85951 0.95925 0.96600 1.86309 1.33876 1.33611 1.64272 1.19697 0.94009 0.86871 0.92957 1.20077 0.93667 0.92536 0.97356 1.24349 0.96743 0.84285 1.11276 1.86508 1.35757 1.14255 1.97309 0.96022 0.84692 0.82886 0.75477 1.66955 1.29662 1.04888 1.14582 1.22578 0.87580 0.99760 0.99559 1.22025 0.99946 0.96009 0.96715 1.21810 0.97934 0.96915 1.02958 1.23253 0.90627 1.05662 0.95060 0.91849 0.92787 0.88157 0.88876 0.86785 0.90104 0.91836 0.90190 0.77061 1.17317 1.18899 0.82018 0.84089 0.84069 0.86652 0.88313 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.00 10.42 101.05 1.05 1.05 16 2 O -0.33 0.02 8.52 -35.23 -0.30 -0.28 16 3 C 0.04 -0.03 0.79 -89.81 -0.07 -0.10 16 4 C 0.44 0.36 2.62 37.16 0.10 0.46 16 5 F -0.17 -0.45 17.26 2.25 0.04 -0.41 16 6 F -0.17 -0.14 15.72 2.25 0.04 -0.11 16 7 F -0.18 -0.21 14.66 2.25 0.03 -0.17 16 8 C -0.14 0.36 6.66 -25.92 -0.17 0.19 16 9 C -0.09 0.17 4.20 -89.72 -0.38 -0.21 16 10 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 11 C 0.06 -0.03 4.34 37.16 0.16 0.13 16 12 O -0.27 -0.58 7.87 -42.31 -0.33 -0.92 16 13 C 0.11 0.35 6.56 -39.07 -0.26 0.10 16 14 C 0.10 0.42 6.11 -82.41 -0.50 -0.09 16 15 C -0.06 -0.09 2.91 36.01 0.10 0.02 16 16 O -0.53 -0.34 10.61 -58.09 -0.62 -0.96 16 17 Si 0.71 0.73 31.89 -169.99 -5.42 -4.69 16 18 N -0.45 -2.05 8.38 -9.35 -0.08 -2.13 16 19 C 0.06 0.13 11.18 -17.54 -0.20 -0.07 16 20 C -0.13 -0.08 10.11 -39.47 -0.40 -0.48 16 21 C -0.17 -0.21 9.14 -39.14 -0.36 -0.57 16 22 C -0.11 0.15 6.92 -25.83 -0.18 -0.03 16 23 H 0.06 -0.07 5.64 -51.93 -0.29 -0.36 16 24 H 0.05 -0.17 6.82 -51.93 -0.35 -0.53 16 25 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 26 H 0.09 -0.31 6.74 -51.93 -0.35 -0.66 16 27 H 0.11 -0.37 7.70 -51.93 -0.40 -0.77 16 28 H 0.08 -0.03 5.68 -51.93 -0.29 -0.32 16 29 H 0.06 -0.08 7.70 -51.93 -0.40 -0.48 16 30 H 0.08 0.01 7.96 -51.92 -0.41 -0.40 16 31 H 0.38 -1.68 8.74 45.56 0.40 -1.29 16 32 H -0.25 -1.05 7.11 56.52 0.40 -0.65 16 33 H -0.26 -1.31 7.11 56.52 0.40 -0.91 16 34 H 0.16 -0.08 8.06 -52.49 -0.42 -0.51 16 35 H 0.14 -0.32 8.06 -52.48 -0.42 -0.74 16 36 H 0.14 -0.14 6.45 -52.49 -0.34 -0.48 16 37 H 0.12 -0.27 7.29 -51.93 -0.38 -0.65 16 38 H 0.10 -0.05 8.10 -51.93 -0.42 -0.48 16 LS Contribution 322.31 15.07 4.86 4.86 Total: 0.00 -8.00 322.31 -7.01 -15.01 By element: Atomic # 1 Polarization: -6.48 SS G_CDS: -4.13 Total: -10.61 kcal Atomic # 6 Polarization: 1.50 SS G_CDS: -1.10 Total: 0.41 kcal Atomic # 7 Polarization: -2.05 SS G_CDS: -0.08 Total: -2.13 kcal Atomic # 8 Polarization: -0.91 SS G_CDS: -1.25 Total: -2.16 kcal Atomic # 9 Polarization: -0.80 SS G_CDS: 0.11 Total: -0.69 kcal Atomic # 14 Polarization: 0.73 SS G_CDS: -5.42 Total: -4.69 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -8.00 -7.01 -15.01 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10177732_17321600.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -168.485 kcal (2) G-P(sol) polarization free energy of solvation -7.998 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.483 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.013 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.011 kcal (6) G-S(sol) free energy of system = (1) + (5) -183.496 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds