Wall clock time and date at job start Mon Mar 8 2021 13:59:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42895 * 114.00677 * 2 1 4 4 C 1.53003 * 112.84549 * 65.74987 * 3 2 1 5 5 F 1.39904 * 109.47086 * 54.06889 * 4 3 2 6 6 F 1.39907 * 109.46904 * 174.06613 * 4 3 2 7 7 F 1.39892 * 109.47339 * 294.06637 * 4 3 2 8 8 C 1.53778 * 113.61505 * 294.55744 * 3 2 1 9 9 C 1.53780 * 87.08077 * 270.79641 * 8 3 2 10 10 H 1.09000 * 113.61312 * 220.01876 * 9 8 3 11 11 C 1.52998 * 113.61499 * 89.11582 * 9 8 3 12 12 O 1.42900 * 109.47015 * 175.00078 * 11 9 8 13 13 C 1.35911 * 116.99784 * 179.97438 * 12 11 9 14 14 C 1.38707 * 120.47230 * 179.72090 * 13 12 11 15 15 C 1.50700 * 119.65966 * 0.02562 * 14 13 12 16 16 O 1.42898 * 109.47000 * 330.00059 * 15 14 13 17 17 Si 1.86297 * 109.47125 * 209.99640 * 15 14 13 18 18 N 1.31845 * 120.68033 * 179.70296 * 14 13 12 19 19 C 1.31847 * 121.78282 * 0.58910 * 18 14 13 20 20 C 1.38254 * 120.88462 * 359.69927 * 19 18 14 21 21 C 1.38534 * 119.22191 * 0.02562 * 20 19 18 22 22 C 1.53778 * 113.61635 * 196.94542 * 3 2 1 23 23 H 1.09001 * 109.46860 * 304.12581 * 1 2 3 24 24 H 1.08999 * 109.46888 * 64.12016 * 1 2 3 25 25 H 1.08997 * 109.47800 * 184.12267 * 1 2 3 26 26 H 1.08999 * 113.61538 * 25.34486 * 8 3 2 27 27 H 1.09002 * 113.61596 * 156.24741 * 8 3 2 28 28 H 1.09003 * 109.46951 * 295.00228 * 11 9 8 29 29 H 1.08997 * 109.47081 * 54.99729 * 11 9 8 30 30 H 1.09007 * 109.46978 * 89.99634 * 15 14 13 31 31 H 0.96698 * 114.00019 * 179.97438 * 16 15 14 32 32 H 1.48498 * 110.00036 * 298.67759 * 17 15 14 33 33 H 1.48499 * 110.00000 * 60.00189 * 17 15 14 34 34 H 1.08002 * 119.55610 * 179.72733 * 19 18 14 35 35 H 1.08003 * 120.38952 * 180.02562 * 20 19 18 36 36 H 1.08002 * 120.81507 * 179.97438 * 21 20 19 37 37 H 1.09005 * 113.61438 * 203.74642 * 22 3 2 38 38 H 1.08996 * 113.61882 * 334.65233 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3053 0.0000 4 6 1.7230 2.0836 1.2856 5 9 2.1220 1.3232 2.3901 6 9 2.4320 3.2896 1.2690 7 9 0.3524 2.3496 1.3732 8 6 1.7260 2.1063 -1.2816 9 6 3.0052 1.4808 -1.8623 10 1 3.6037 2.1770 -2.4499 11 6 2.7663 0.1498 -2.5778 12 8 3.9844 -0.2925 -3.1802 13 6 3.9449 -1.4687 -3.8601 14 6 5.0844 -1.9627 -4.4777 15 6 6.3743 -1.1881 -4.3923 16 8 6.0858 0.2080 -4.2935 17 14 7.3915 -1.5055 -5.9205 18 7 5.0522 -3.1061 -5.1334 19 6 3.9457 -3.8152 -5.2388 20 6 2.7687 -3.3849 -4.6550 21 6 2.7594 -2.1913 -3.9518 22 6 3.4922 1.3197 -0.4107 23 1 -0.3633 0.5765 0.8507 24 1 -0.3633 0.4486 -0.9246 25 1 -0.3634 -1.0249 0.0739 26 1 0.8164 1.7976 -1.7966 27 1 1.7909 3.1858 -1.1452 28 1 2.4262 -0.5941 -1.8573 29 1 2.0071 0.2827 -3.3485 30 1 6.9320 -1.5071 -3.5118 31 1 6.8714 0.7687 -4.2344 32 1 7.7251 -2.9492 -6.0177 33 1 6.6421 -1.0748 -7.1280 34 1 3.9590 -4.7450 -5.7882 35 1 1.8669 -3.9724 -4.7460 36 1 1.8543 -1.8307 -3.4859 37 1 4.0408 2.1839 -0.0358 38 1 4.0064 0.3770 -0.2237 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_10177732_17321600.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:59:43 Heat of formation + Delta-G solvation = -180.990381 kcal Electronic energy + Delta-G solvation = -28467.111719 eV Core-core repulsion = 23863.790597 eV Total energy + Delta-G solvation = -4603.321122 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.107 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -51.28567 -48.83077 -48.74502 -41.98823 -41.29803 -39.10160 -37.59014 -37.05165 -33.60287 -32.13378 -30.38162 -28.19089 -27.43032 -27.35175 -26.76840 -24.33004 -23.44120 -22.84336 -20.61471 -19.85448 -19.57873 -19.25906 -19.05930 -18.56726 -17.70801 -17.31727 -17.27778 -16.78529 -16.47465 -16.13357 -15.86244 -15.62238 -15.58054 -15.47010 -15.29125 -15.18062 -14.97354 -14.91700 -14.87999 -14.61904 -14.18938 -14.07990 -13.85244 -13.51986 -13.19800 -13.14726 -12.68508 -12.61032 -12.40830 -12.11292 -11.92524 -11.88898 -11.62918 -11.03419 -10.80837 -10.74535 -10.24110 -9.31105 -4.91832 -0.07688 0.13784 1.38313 1.51855 1.74129 1.96044 2.08461 2.18518 2.54626 2.60213 2.62206 2.88600 2.92581 3.30208 3.37836 3.47842 3.50596 3.64230 3.84721 3.96382 4.05008 4.15595 4.25231 4.26878 4.29559 4.35217 4.36661 4.47587 4.51470 4.62494 4.65172 4.70668 4.79739 4.82382 4.93209 4.97837 5.04516 5.37478 5.70373 6.22209 6.75502 6.99554 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.003 4.003 2 O -0.347 6.347 3 C 0.037 3.963 4 C 0.433 3.567 5 F -0.188 7.188 6 F -0.175 7.175 7 F -0.184 7.184 8 C -0.134 4.134 9 C -0.087 4.087 10 H 0.114 0.886 11 C 0.060 3.940 12 O -0.280 6.280 13 C 0.099 3.901 14 C 0.068 3.932 15 C -0.059 4.059 16 O -0.544 6.544 17 Si 0.808 3.192 18 N -0.483 5.483 19 C 0.046 3.954 20 C -0.122 4.122 21 C -0.172 4.172 22 C -0.110 4.110 23 H 0.053 0.947 24 H 0.070 0.930 25 H 0.110 0.890 26 H 0.105 0.895 27 H 0.124 0.876 28 H 0.079 0.921 29 H 0.074 0.926 30 H 0.093 0.907 31 H 0.403 0.597 32 H -0.295 1.295 33 H -0.319 1.319 34 H 0.181 0.819 35 H 0.173 0.827 36 H 0.164 0.836 37 H 0.124 0.876 38 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.286 1.923 -0.470 2.361 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 O -0.265 6.265 3 C -0.005 4.005 4 C 0.379 3.621 5 F -0.170 7.170 6 F -0.157 7.157 7 F -0.166 7.166 8 C -0.172 4.172 9 C -0.106 4.106 10 H 0.132 0.868 11 C -0.015 4.015 12 O -0.191 6.191 13 C 0.050 3.950 14 C -0.070 4.070 15 C -0.168 4.168 16 O -0.353 6.353 17 Si 0.714 3.286 18 N -0.195 5.195 19 C -0.111 4.111 20 C -0.141 4.141 21 C -0.199 4.199 22 C -0.147 4.147 23 H 0.072 0.928 24 H 0.089 0.911 25 H 0.128 0.872 26 H 0.123 0.877 27 H 0.142 0.858 28 H 0.097 0.903 29 H 0.092 0.908 30 H 0.111 0.889 31 H 0.254 0.746 32 H -0.223 1.223 33 H -0.249 1.249 34 H 0.198 0.802 35 H 0.190 0.810 36 H 0.181 0.819 37 H 0.142 0.858 38 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -0.829 1.010 -1.526 2.009 hybrid contribution -1.947 0.040 1.170 2.271 sum -2.776 1.050 -0.356 2.989 Atomic orbital electron populations 1.23413 0.78736 1.05206 1.02473 1.88065 1.22132 1.22445 1.93887 1.24171 1.00547 0.86237 0.89579 1.21586 0.74008 0.78784 0.87765 1.93190 1.90526 1.75815 1.57446 1.93182 1.78483 1.47319 1.96706 1.93136 1.32374 1.94200 1.96854 1.23646 0.99774 1.01577 0.92173 1.21979 0.97735 0.95902 0.94938 0.86758 1.22933 0.85437 0.96334 0.96775 1.86285 1.35247 1.33301 1.64255 1.19848 0.94433 0.87455 0.93247 1.20490 0.95125 0.93049 0.98331 1.24396 0.95968 0.84753 1.11725 1.86464 1.37582 1.13980 1.97249 0.95185 0.82111 0.78866 0.72391 1.66961 1.31162 1.05727 1.15700 1.23048 0.87749 1.00364 0.99915 1.22373 1.00483 0.95864 0.95370 1.22151 0.98167 0.96893 1.02666 1.23305 0.90386 1.05490 0.95520 0.92811 0.91137 0.87200 0.87666 0.85759 0.90316 0.90812 0.88897 0.74645 1.22336 1.24866 0.80230 0.80965 0.81878 0.85800 0.89426 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.01 10.42 113.37 1.18 1.20 16 2 O -0.35 0.16 8.52 -148.98 -1.27 -1.11 16 3 C 0.04 -0.07 0.79 -10.27 -0.01 -0.08 16 4 C 0.43 0.73 2.62 71.98 0.19 0.92 16 5 F -0.19 -1.11 17.26 44.97 0.78 -0.33 16 6 F -0.18 -0.26 15.72 44.97 0.71 0.45 16 7 F -0.18 -0.41 14.66 44.97 0.66 0.25 16 8 C -0.13 0.85 6.66 31.12 0.21 1.06 16 9 C -0.09 0.39 4.20 -10.21 -0.04 0.35 16 10 H 0.11 -0.59 8.14 -2.39 -0.02 -0.61 16 11 C 0.06 -0.11 4.34 71.98 0.31 0.20 16 12 O -0.28 -1.18 7.87 -70.69 -0.56 -1.74 16 13 C 0.10 0.64 6.56 22.60 0.15 0.79 16 14 C 0.07 0.62 6.11 42.67 0.26 0.88 16 15 C -0.06 -0.22 2.91 71.24 0.21 -0.01 16 16 O -0.54 -0.69 10.61 -127.13 -1.35 -2.03 16 17 Si 0.81 2.79 31.89 68.60 2.19 4.98 16 18 N -0.48 -5.03 8.38 -183.50 -1.54 -6.57 16 19 C 0.05 0.21 11.18 84.69 0.95 1.16 16 20 C -0.12 -0.05 10.11 22.34 0.23 0.18 16 21 C -0.17 -0.32 9.14 22.56 0.21 -0.12 16 22 C -0.11 0.33 6.92 31.18 0.22 0.54 16 23 H 0.05 -0.12 5.64 -2.39 -0.01 -0.14 16 24 H 0.07 -0.56 6.82 -2.39 -0.02 -0.57 16 25 H 0.11 -0.73 8.14 -2.39 -0.02 -0.75 16 26 H 0.10 -0.90 6.74 -2.39 -0.02 -0.92 16 27 H 0.12 -1.01 7.70 -2.39 -0.02 -1.03 16 28 H 0.08 -0.11 5.68 -2.39 -0.01 -0.12 16 29 H 0.07 -0.30 7.70 -2.39 -0.02 -0.32 16 30 H 0.09 0.05 7.96 -2.38 -0.02 0.03 16 31 H 0.40 -3.79 8.74 -74.06 -0.65 -4.44 16 32 H -0.30 -3.20 7.11 99.48 0.71 -2.49 16 33 H -0.32 -4.01 7.11 99.48 0.71 -3.31 16 34 H 0.18 -0.15 8.06 -2.91 -0.02 -0.18 16 35 H 0.17 -1.15 8.06 -2.91 -0.02 -1.17 16 36 H 0.16 -0.58 6.45 -2.91 -0.02 -0.60 16 37 H 0.12 -0.62 7.29 -2.38 -0.02 -0.64 16 38 H 0.09 -0.05 8.10 -2.39 -0.02 -0.07 16 Total: 0.00 -20.55 322.31 4.18 -16.38 By element: Atomic # 1 Polarization: -17.83 SS G_CDS: 0.51 Total: -17.32 kcal Atomic # 6 Polarization: 3.01 SS G_CDS: 4.05 Total: 7.06 kcal Atomic # 7 Polarization: -5.03 SS G_CDS: -1.54 Total: -6.57 kcal Atomic # 8 Polarization: -1.71 SS G_CDS: -3.17 Total: -4.89 kcal Atomic # 9 Polarization: -1.78 SS G_CDS: 2.14 Total: 0.36 kcal Atomic # 14 Polarization: 2.79 SS G_CDS: 2.19 Total: 4.98 kcal Total: -20.55 4.18 -16.38 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10177732_17321600.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -164.614 kcal (2) G-P(sol) polarization free energy of solvation -20.554 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -185.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.177 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.377 kcal (6) G-S(sol) free energy of system = (1) + (5) -180.990 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds