Wall clock time and date at job start Mon Mar 8 2021 13:52:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42905 * 114.00221 * 2 1 4 4 C 1.53000 * 112.84631 * 294.12971 * 3 2 1 5 5 F 1.39897 * 109.46764 * 195.74898 * 4 3 2 6 6 F 1.39901 * 109.47295 * 315.74328 * 4 3 2 7 7 F 1.39898 * 109.47358 * 75.74901 * 4 3 2 8 8 C 1.53774 * 113.61555 * 162.82305 * 3 2 1 9 9 C 1.53781 * 87.08015 * 270.88387 * 8 3 2 10 10 H 1.09005 * 113.68956 * 220.00854 * 9 8 3 11 11 C 1.53002 * 113.61468 * 89.11880 * 9 8 3 12 12 O 1.42894 * 109.47147 * 87.50326 * 11 9 8 13 13 C 1.35808 * 116.99878 * 179.97438 * 12 11 9 14 14 C 1.40963 * 120.22766 * 269.72733 * 13 12 11 15 15 C 1.40411 * 121.29925 * 0.55164 * 14 13 12 16 16 C 1.36132 * 119.66416 * 179.73227 * 15 14 13 17 17 C 1.39354 * 120.98265 * 359.68592 * 16 15 14 18 18 C 1.36104 * 120.97574 * 0.04266 * 17 16 15 19 19 C 1.40556 * 119.64619 * 359.97438 * 18 17 16 20 20 C 1.40517 * 121.26001 * 179.97438 * 19 18 17 21 21 C 1.36180 * 119.76710 * 179.97438 * 20 19 18 22 22 C 1.36676 * 120.22913 * 89.99794 * 13 12 11 23 23 C 1.50696 * 119.53573 * 0.02562 * 22 13 12 24 24 O 1.42905 * 109.47054 * 75.00187 * 23 22 13 25 25 Si 1.86297 * 109.47201 * 194.99916 * 23 22 13 26 26 C 1.53775 * 113.61148 * 65.32144 * 3 2 1 27 27 H 1.09004 * 109.46804 * 63.09419 * 1 2 3 28 28 H 1.08999 * 109.47336 * 183.09054 * 1 2 3 29 29 H 1.08998 * 109.47279 * 303.09647 * 1 2 3 30 30 H 1.08995 * 113.61483 * 156.33427 * 8 3 2 31 31 H 1.08999 * 113.61416 * 25.43016 * 8 3 2 32 32 H 1.08998 * 109.47088 * 327.49852 * 11 9 8 33 33 H 1.09005 * 109.46595 * 207.50411 * 11 9 8 34 34 H 1.08002 * 120.16179 * 359.45757 * 15 14 13 35 35 H 1.08002 * 119.50922 * 179.70321 * 16 15 14 36 36 H 1.08005 * 119.51324 * 180.02562 * 17 16 15 37 37 H 1.08001 * 120.17815 * 179.97438 * 18 17 16 38 38 H 1.08000 * 120.12108 * 359.97438 * 20 19 18 39 39 H 1.08002 * 119.47386 * 180.02562 * 21 20 19 40 40 H 1.09003 * 109.47287 * 315.00137 * 23 22 13 41 41 H 0.96695 * 113.99805 * 180.02562 * 24 23 22 42 42 H 1.48505 * 109.99780 * 300.00121 * 25 23 22 43 43 H 1.48499 * 109.99870 * 61.31757 * 25 23 22 44 44 H 1.08998 * 113.61951 * 334.57027 * 26 3 2 45 45 H 1.09001 * 113.68744 * 203.67626 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 1.7254 2.0826 -1.2868 5 9 2.5970 3.1733 -1.3754 6 9 1.9148 1.2435 -2.3900 7 9 0.4039 2.5417 -1.2715 8 6 3.4906 1.3207 0.4161 9 6 3.0003 1.4808 1.8648 10 1 3.5974 2.1763 2.4549 11 6 2.7580 0.1504 2.5805 12 8 3.9738 -0.2929 3.1864 13 6 3.9310 -1.4672 3.8672 14 6 3.6256 -1.4789 5.2433 15 6 3.3488 -0.2913 5.9393 16 6 3.0525 -0.3418 7.2670 17 6 3.0130 -1.5573 7.9474 18 6 3.2704 -2.7288 7.3042 19 6 3.5804 -2.7158 5.9333 20 6 3.8523 -3.9050 5.2359 21 6 4.1487 -3.8571 3.9076 22 6 4.1891 -2.6452 3.2241 23 6 4.5220 -2.6319 1.7545 24 8 5.8589 -2.1605 1.5732 25 14 4.3737 -4.3575 1.0684 26 6 1.7234 2.1074 1.2803 27 1 -0.3633 0.4651 -0.9165 28 1 -0.3634 -1.0261 0.0554 29 1 -0.3634 0.5611 0.8609 30 1 4.0401 2.1848 0.0430 31 1 4.0058 0.3781 0.2312 32 1 2.4190 -0.5935 1.8596 33 1 1.9968 0.2848 3.3492 34 1 3.3751 0.6579 5.4247 35 1 2.8447 0.5737 7.8009 36 1 2.7749 -1.5699 9.0008 37 1 3.2366 -3.6635 7.8443 38 1 3.8263 -4.8537 5.7514 39 1 4.3566 -4.7740 3.3762 40 1 3.8300 -1.9720 1.2311 41 1 6.1415 -2.1252 0.6492 42 1 5.3122 -5.2669 1.7737 43 1 2.9801 -4.8471 1.2221 44 1 0.8120 1.8001 1.7931 45 1 1.7893 3.1870 1.1449 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_10544690_17321600.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:52:40 Heat of formation + Delta-G solvation = -174.992278 kcal Electronic energy + Delta-G solvation = -35430.426114 eV Core-core repulsion = 30352.574960 eV Total energy + Delta-G solvation = -5077.851154 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.127 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -51.17198 -48.71881 -48.60480 -42.01564 -41.38574 -39.27726 -38.09348 -37.13277 -36.71275 -33.10050 -31.99714 -30.83457 -29.81881 -28.34521 -27.38250 -26.92356 -26.39086 -24.43182 -23.41669 -22.86432 -22.65472 -20.70735 -19.84089 -19.47443 -19.25239 -19.05820 -18.48511 -18.31010 -17.63183 -17.33129 -16.95567 -16.65441 -16.37693 -16.07269 -15.76396 -15.57150 -15.51882 -15.45807 -15.32543 -15.11782 -15.04804 -14.89560 -14.79352 -14.69956 -14.48104 -14.28654 -14.12218 -13.94528 -13.93280 -13.45927 -13.27164 -13.20381 -12.83715 -12.80411 -12.40753 -12.22248 -12.20461 -12.00822 -11.90911 -11.75900 -11.70774 -11.11771 -10.79957 -10.71894 -10.16824 -9.64479 -8.78572 -4.96574 -0.56137 -0.08859 0.92039 1.29753 1.54715 1.63435 1.82081 1.96484 1.97581 2.36511 2.54999 2.61925 2.86541 3.02839 3.26803 3.35248 3.42793 3.48056 3.61280 3.70972 3.82797 3.85737 3.97789 4.04155 4.08825 4.12454 4.16473 4.24745 4.28424 4.30141 4.33253 4.34364 4.39894 4.45753 4.49125 4.57609 4.62548 4.66669 4.74964 4.88981 4.94939 5.01636 5.09953 5.11943 5.34562 5.53549 5.55954 5.58967 5.61390 5.92477 6.50038 6.71970 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.332 6.332 3 C 0.039 3.961 4 C 0.437 3.563 5 F -0.175 7.175 6 F -0.174 7.174 7 F -0.182 7.182 8 C -0.109 4.109 9 C -0.096 4.096 10 H 0.105 0.895 11 C 0.074 3.926 12 O -0.318 6.318 13 C 0.143 3.857 14 C -0.070 4.070 15 C -0.096 4.096 16 C -0.116 4.116 17 C -0.109 4.109 18 C -0.108 4.108 19 C -0.038 4.038 20 C -0.102 4.102 21 C -0.110 4.110 22 C -0.094 4.094 23 C -0.063 4.063 24 O -0.537 6.537 25 Si 0.678 3.322 26 C -0.145 4.145 27 H 0.054 0.946 28 H 0.101 0.899 29 H 0.054 0.946 30 H 0.116 0.884 31 H 0.099 0.901 32 H 0.076 0.924 33 H 0.057 0.943 34 H 0.131 0.869 35 H 0.126 0.874 36 H 0.127 0.873 37 H 0.131 0.869 38 H 0.134 0.866 39 H 0.125 0.875 40 H 0.072 0.928 41 H 0.379 0.621 42 H -0.249 1.249 43 H -0.254 1.254 44 H 0.093 0.907 45 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.233 0.018 0.251 2.247 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.250 6.250 3 C -0.004 4.004 4 C 0.382 3.618 5 F -0.156 7.156 6 F -0.155 7.155 7 F -0.164 7.164 8 C -0.146 4.146 9 C -0.114 4.114 10 H 0.124 0.876 11 C 0.001 3.999 12 O -0.235 6.235 13 C 0.099 3.901 14 C -0.070 4.070 15 C -0.113 4.113 16 C -0.134 4.134 17 C -0.126 4.126 18 C -0.126 4.126 19 C -0.038 4.038 20 C -0.120 4.120 21 C -0.128 4.128 22 C -0.095 4.095 23 C -0.174 4.174 24 O -0.342 6.342 25 Si 0.579 3.421 26 C -0.182 4.182 27 H 0.073 0.927 28 H 0.120 0.880 29 H 0.073 0.927 30 H 0.134 0.866 31 H 0.118 0.882 32 H 0.094 0.906 33 H 0.075 0.925 34 H 0.148 0.852 35 H 0.144 0.856 36 H 0.145 0.855 37 H 0.149 0.851 38 H 0.152 0.848 39 H 0.143 0.857 40 H 0.090 0.910 41 H 0.226 0.774 42 H -0.174 1.174 43 H -0.178 1.178 44 H 0.111 0.889 45 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -2.221 -0.821 1.006 2.573 hybrid contribution -0.679 0.619 0.107 0.925 sum -2.901 -0.203 1.113 3.113 Atomic orbital electron populations 1.23144 0.79527 1.04341 1.01592 1.88073 1.21101 1.21983 1.93854 1.24055 1.00175 0.86270 0.89865 1.21177 0.74286 0.78748 0.87540 1.93182 1.69487 1.56323 1.96604 1.93219 1.94767 1.70939 1.56579 1.93190 1.36567 1.89771 1.96844 1.23242 0.90618 1.05788 0.94979 1.22057 0.97160 0.96593 0.95633 0.87637 1.22700 0.85550 0.95341 0.96345 1.85997 1.32823 1.35596 1.69069 1.18015 0.98218 0.84964 0.88887 1.18352 1.01465 0.93883 0.93317 1.20960 0.98415 0.97299 0.94668 1.20935 0.99659 0.98276 0.94522 1.20959 0.98911 0.92419 1.00359 1.21062 0.99612 0.98992 0.92919 1.17999 0.99515 0.92243 0.94076 1.20998 0.99396 0.97692 0.93950 1.20571 1.00514 0.96633 0.95042 1.19345 1.02751 0.92642 0.94734 1.24551 0.87448 1.10429 0.94943 1.86547 1.27357 1.89024 1.31314 0.95322 0.81371 0.75607 0.89770 1.23607 0.99714 1.01111 0.93772 0.92697 0.88021 0.92698 0.86579 0.88197 0.90628 0.92459 0.85156 0.85570 0.85541 0.85103 0.84777 0.85728 0.90997 0.77397 1.17391 1.17847 0.88858 0.86965 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.33 101.05 1.04 1.03 16 2 O -0.33 0.11 8.36 -35.23 -0.29 -0.18 16 3 C 0.04 -0.04 0.84 -89.81 -0.08 -0.11 16 4 C 0.44 0.28 2.52 37.16 0.09 0.37 16 5 F -0.17 -0.14 15.82 2.25 0.04 -0.11 16 6 F -0.17 -0.37 17.11 2.25 0.04 -0.33 16 7 F -0.18 -0.19 15.34 2.25 0.03 -0.16 16 8 C -0.11 0.17 6.89 -25.92 -0.18 -0.01 16 9 C -0.10 0.16 4.20 -89.81 -0.38 -0.22 16 10 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 11 C 0.07 0.00 5.38 37.16 0.20 0.20 16 12 O -0.32 -0.82 8.60 -19.14 -0.16 -0.99 16 13 C 0.14 0.52 5.67 -39.12 -0.22 0.30 16 14 C -0.07 -0.24 5.75 -106.72 -0.61 -0.85 16 15 C -0.10 -0.18 9.56 -39.52 -0.38 -0.56 16 16 C -0.12 -0.09 9.95 -39.92 -0.40 -0.49 16 17 C -0.11 -0.06 9.95 -39.93 -0.40 -0.46 16 18 C -0.11 -0.12 9.77 -39.47 -0.39 -0.51 16 19 C -0.04 -0.11 5.74 -106.84 -0.61 -0.72 16 20 C -0.10 -0.23 9.77 -39.46 -0.39 -0.61 16 21 C -0.11 -0.34 8.56 -39.97 -0.34 -0.68 16 22 C -0.09 -0.33 5.27 -104.83 -0.55 -0.88 16 23 C -0.06 -0.08 2.32 36.00 0.08 0.00 16 24 O -0.54 -0.83 12.86 -35.23 -0.45 -1.28 16 25 Si 0.68 -0.10 30.16 -169.99 -5.13 -5.23 16 26 C -0.14 0.35 6.52 -25.92 -0.17 0.18 16 27 H 0.05 -0.07 6.56 -51.93 -0.34 -0.41 16 28 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 29 H 0.05 -0.16 6.60 -51.93 -0.34 -0.50 16 30 H 0.12 -0.27 7.03 -51.93 -0.37 -0.63 16 31 H 0.10 -0.12 8.10 -51.93 -0.42 -0.54 16 32 H 0.08 0.02 5.02 -51.93 -0.26 -0.24 16 33 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.13 0.10 7.62 -52.49 -0.40 -0.30 16 35 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 36 H 0.13 -0.20 8.06 -52.48 -0.42 -0.63 16 37 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 38 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 39 H 0.13 0.28 4.79 -52.49 -0.25 0.03 16 40 H 0.07 0.02 6.42 -51.93 -0.33 -0.31 16 41 H 0.38 -1.29 8.74 45.56 0.40 -0.90 16 42 H -0.25 -0.60 6.72 56.52 0.38 -0.22 16 43 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 44 H 0.09 -0.29 6.64 -51.93 -0.34 -0.63 16 45 H 0.11 -0.36 8.04 -51.93 -0.42 -0.78 16 LS Contribution 373.26 15.07 5.63 5.63 Total: 0.00 -7.07 373.26 -9.23 -16.30 By element: Atomic # 1 Polarization: -4.37 SS G_CDS: -5.26 Total: -9.63 kcal Atomic # 6 Polarization: -0.35 SS G_CDS: -3.67 Total: -4.02 kcal Atomic # 8 Polarization: -1.54 SS G_CDS: -0.91 Total: -2.45 kcal Atomic # 9 Polarization: -0.71 SS G_CDS: 0.11 Total: -0.60 kcal Atomic # 14 Polarization: -0.10 SS G_CDS: -5.13 Total: -5.23 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -7.07 -9.23 -16.30 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10544690_17321600.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -158.692 kcal (2) G-P(sol) polarization free energy of solvation -7.072 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -165.763 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.229 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.301 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.992 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds