Wall clock time and date at job start Mon Mar 8 2021 15:25:33
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 C 1.52997 * 1
3 3 C 1.53004 * 109.47122 * 2 1
4 4 C 1.53006 * 109.46981 * 240.00575 * 2 1 3
5 5 O 1.42901 * 109.47743 * 120.00280 * 2 1 3
6 6 C 1.42905 * 113.99522 * 59.99892 * 5 2 1
7 7 H 1.08994 * 112.85093 * 341.20357 * 6 5 2
8 8 C 1.53957 * 113.74008 * 112.40659 * 6 5 2
9 9 C 1.53783 * 87.01875 * 139.94242 * 8 6 5
10 10 H 1.08990 * 113.61571 * 89.22675 * 9 8 6
11 11 C 1.53000 * 113.61182 * 220.05000 * 9 8 6
12 12 O 1.42903 * 109.46726 * 274.13349 * 11 9 8
13 13 C 1.35925 * 116.99722 * 180.02562 * 12 11 9
14 14 C 1.38708 * 120.03064 * 179.72669 * 13 12 11
15 15 C 1.50700 * 119.99624 * 359.97438 * 14 13 12
16 16 O 1.42901 * 109.46866 * 284.99681 * 15 14 13
17 17 Si 1.86298 * 109.47179 * 164.99673 * 15 14 13
18 18 C 1.38187 * 120.00330 * 179.71985 * 14 13 12
19 19 C 1.38293 * 120.06521 * 0.55046 * 18 14 13
20 20 Cl 1.73605 * 119.96756 * 179.70198 * 19 18 14
21 21 C 1.38602 * 120.06415 * 359.72498 * 19 18 14
22 22 F 1.35105 * 120.00331 * 179.97438 * 21 19 18
23 23 C 1.38328 * 119.99730 * 359.97438 * 21 19 18
24 24 C 1.53778 * 113.61034 * 210.00240 * 6 5 2
25 25 H 1.09001 * 109.47058 * 299.99151 * 1 2 3
26 26 H 1.08991 * 109.47307 * 59.99823 * 1 2 3
27 27 H 1.09005 * 109.46852 * 179.97438 * 1 2 3
28 28 H 1.08998 * 109.47122 * 180.02562 * 3 2 1
29 29 H 1.08998 * 109.47345 * 300.00603 * 3 2 1
30 30 H 1.09005 * 109.46687 * 60.00038 * 3 2 1
31 31 H 1.08996 * 109.47135 * 299.99246 * 4 2 1
32 32 H 1.08998 * 109.47058 * 59.99659 * 4 2 1
33 33 H 1.09006 * 109.46872 * 179.97438 * 4 2 1
34 34 H 1.09003 * 113.61309 * 25.42092 * 8 6 5
35 35 H 1.09000 * 113.66774 * 254.46843 * 8 6 5
36 36 H 1.09002 * 109.47398 * 34.13594 * 11 9 8
37 37 H 1.09001 * 109.47194 * 154.13774 * 11 9 8
38 38 H 1.09000 * 109.47753 * 44.99516 * 15 14 13
39 39 H 0.96701 * 113.99735 * 300.00118 * 16 15 14
40 40 H 1.48505 * 109.99834 * 58.67891 * 17 15 14
41 41 H 1.48501 * 110.00036 * 179.97438 * 17 15 14
42 42 H 1.07999 * 119.96611 * 180.25780 * 18 14 13
43 43 H 1.07993 * 120.03788 * 180.02562 * 23 21 19
44 44 H 1.09000 * 113.61215 * 105.39165 * 24 6 5
45 45 H 1.08993 * 113.69471 * 334.49226 * 24 6 5
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 6 1.5300 0.0000 0.0000
3 6 2.0400 1.4425 0.0000
4 6 2.0400 -0.7212 -1.2494
5 8 2.0065 -0.6737 1.1667
6 6 1.5848 -2.0356 1.2643
7 1 0.7238 -2.2583 0.6342
8 6 2.7323 -3.0517 1.1188
9 6 2.0544 -3.8567 2.2401
10 1 1.3215 -4.5777 1.8783
11 6 3.0399 -4.4626 3.2414
12 8 3.4996 -5.7245 2.7530
13 6 4.3873 -6.4003 3.5293
14 6 4.8703 -7.6339 3.1184
15 6 4.4104 -8.2257 1.8111
16 8 3.0787 -8.7236 1.9559
17 14 5.5459 -9.6212 1.3274
18 6 5.7773 -8.3179 3.9054
19 6 6.1957 -7.7789 5.1082
20 17 7.3293 -8.6439 6.0985
21 6 5.7105 -6.5490 5.5242
22 9 6.1196 -6.0239 6.6999
23 6 4.8072 -5.8593 4.7356
24 6 1.4334 -2.5312 2.7121
25 1 -0.3633 0.5137 0.8901
26 1 -0.3633 0.5138 -0.8899
27 1 -0.3633 -1.0277 -0.0005
28 1 3.1300 1.4425 -0.0005
29 1 1.6766 1.9564 -0.8899
30 1 1.6766 1.9563 0.8900
31 1 1.6767 -1.7488 -1.2494
32 1 1.6766 -0.2073 -2.1393
33 1 3.1300 -0.7207 -1.2496
34 1 3.7075 -2.6517 1.3966
35 1 2.7426 -3.5654 0.1575
36 1 3.8888 -3.7907 3.3677
37 1 2.5423 -4.6038 4.2009
38 1 4.4289 -7.4576 1.0379
39 1 2.9873 -9.4121 2.6287
40 1 5.5539 -10.6604 2.3882
41 1 5.1026 -10.2137 0.0398
42 1 6.1562 -9.2764 3.5829
43 1 4.4291 -4.9008 5.0589
44 1 0.3967 -2.6254 3.0352
45 1 2.0522 -1.9896 3.4275
There are 61 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 61
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
s_7_10548606_14598384.mol2 45
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Mon Mar 8 2021 15:25:33
Heat of formation + Delta-G solvation = -108.807318 kcal
Electronic energy + Delta-G solvation = -28263.829913 eV
Core-core repulsion = 23997.097716 eV
Total energy + Delta-G solvation = -4266.732198 eV
No. of doubly occupied orbitals = 61
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 345.123 amu
Computer time = 0.96 seconds
Orbital eigenvalues (eV)
-50.20884 -41.71089 -40.81689 -39.17834 -38.08808 -37.92876 -37.12843 -33.91322
-32.71157 -31.39804 -29.42662 -28.35704 -28.27476 -26.75996 -26.60627 -24.75198
-23.29486 -22.84162 -20.84967 -20.65286 -19.77986 -18.75100 -18.16505 -17.71479
-17.49691 -17.35944 -16.76861 -16.73923 -16.51572 -16.11662 -15.99747 -15.68298
-15.44834 -15.26265 -15.12922 -14.55426 -14.41291 -14.14652 -13.99789 -13.65280
-13.43940 -13.35855 -13.22305 -13.21911 -12.94981 -12.87380 -12.76829 -12.65364
-12.53671 -12.26481 -12.10569 -11.96400 -11.84551 -11.73841 -11.67460 -11.34352
-11.17735 -10.62847 -10.35652 -10.25640 -9.37387 -4.93139 -0.32405 -0.17069
0.89615 1.25910 1.55844 1.87869 1.94157 2.09603 2.73919 2.80733
3.29277 3.39718 3.45293 3.55066 3.58138 3.71221 3.76963 3.78267
3.90963 3.97688 4.06782 4.07491 4.11350 4.21097 4.32213 4.39337
4.44600 4.50901 4.61267 4.61798 4.67670 4.74080 4.78161 4.78480
4.79239 4.84277 4.87040 4.91740 4.94249 5.01948 5.12617 5.15290
5.23859 5.31896 5.33207 5.39186 6.10536 6.41807 6.50962
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C -0.177 4.177
2 C 0.099 3.901
3 C -0.140 4.140
4 C -0.174 4.174
5 O -0.380 6.380
6 C 0.058 3.942
7 H 0.098 0.902
8 C -0.146 4.146
9 C -0.102 4.102
10 H 0.105 0.895
11 C 0.062 3.938
12 O -0.299 6.299
13 C 0.190 3.810
14 C -0.149 4.149
15 C -0.065 4.065
16 O -0.540 6.540
17 Si 0.758 3.242
18 C -0.042 4.042
19 C -0.118 4.118
20 Cl -0.051 7.051
21 C 0.147 3.853
22 F -0.129 7.129
23 C -0.235 4.235
24 C -0.123 4.123
25 H 0.059 0.941
26 H 0.076 0.924
27 H 0.062 0.938
28 H 0.057 0.943
29 H 0.083 0.917
30 H 0.058 0.942
31 H 0.060 0.940
32 H 0.074 0.926
33 H 0.057 0.943
34 H 0.084 0.916
35 H 0.072 0.928
36 H 0.077 0.923
37 H 0.079 0.921
38 H 0.123 0.877
39 H 0.385 0.615
40 H -0.269 1.269
41 H -0.296 1.296
42 H 0.167 0.833
43 H 0.166 0.834
44 H 0.086 0.914
45 H 0.092 0.908
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges -1.057 1.750 -2.737 3.416
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.235 4.235
2 C 0.060 3.940
3 C -0.197 4.197
4 C -0.231 4.231
5 O -0.300 6.300
6 C 0.000 4.000
7 H 0.116 0.884
8 C -0.184 4.184
9 C -0.120 4.120
10 H 0.123 0.877
11 C -0.013 4.013
12 O -0.211 6.211
13 C 0.142 3.858
14 C -0.151 4.151
15 C -0.174 4.174
16 O -0.348 6.348
17 Si 0.662 3.338
18 C -0.060 4.060
19 C -0.146 4.146
20 Cl -0.022 7.022
21 C 0.127 3.873
22 F -0.108 7.108
23 C -0.255 4.255
24 C -0.160 4.160
25 H 0.079 0.921
26 H 0.095 0.905
27 H 0.081 0.919
28 H 0.077 0.923
29 H 0.102 0.898
30 H 0.077 0.923
31 H 0.079 0.921
32 H 0.093 0.907
33 H 0.077 0.923
34 H 0.103 0.897
35 H 0.091 0.909
36 H 0.095 0.905
37 H 0.097 0.903
38 H 0.141 0.859
39 H 0.234 0.766
40 H -0.195 1.195
41 H -0.223 1.223
42 H 0.184 0.816
43 H 0.184 0.816
44 H 0.104 0.896
45 H 0.110 0.890
Dipole moment (debyes) X Y Z Total
from point charges -0.970 1.352 -3.297 3.693
hybrid contribution -0.846 -0.219 1.143 1.439
sum -1.816 1.134 -2.154 3.037
Atomic orbital electron populations
1.22451 0.95046 1.02731 1.03224 1.21664 0.93623 0.93317 0.85401
1.21795 1.01657 0.93255 1.02976 1.22443 1.01859 1.00925 0.97880
1.88009 1.74223 1.24159 1.43595 1.23702 0.97277 0.81263 0.97733
0.88441 1.23613 0.99108 0.96481 0.99216 1.22240 0.97752 0.95742
0.96268 0.87697 1.23116 0.97861 0.82013 0.98290 1.86205 1.55804
1.33713 1.45368 1.18585 0.88108 0.90756 0.88366 1.19678 1.01149
0.94272 0.99988 1.25012 0.89931 1.06790 0.95673 1.86631 1.26814
1.58793 1.62564 0.94138 0.86055 0.76392 0.77182 1.20894 0.94319
1.00176 0.90583 1.20825 1.01906 0.94935 0.96914 1.98404 1.59061
1.75644 1.69101 1.17249 0.95879 0.91453 0.82735 1.91558 1.88759
1.86029 1.44417 1.21315 1.03646 1.04299 0.96229 1.23204 1.02316
0.93815 0.96686 0.92150 0.90506 0.91882 0.92344 0.89839 0.92272
0.92127 0.90683 0.92339 0.89707 0.90927 0.90452 0.90326 0.85939
0.76595 1.19496 1.22342 0.81564 0.81618 0.89574 0.88952
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 13.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C -0.18 0.37 8.38 71.98 0.60 0.97 16
2 C 0.10 -0.02 1.11 -10.79 -0.01 -0.03 16
3 C -0.14 0.12 8.84 71.98 0.64 0.75 16
4 C -0.17 0.29 8.38 71.98 0.60 0.89 16
5 O -0.38 -1.05 10.00 -148.98 -1.49 -2.54 16
6 C 0.06 -0.07 2.82 31.18 0.09 0.02 16
7 H 0.10 -0.26 5.54 -2.39 -0.01 -0.27 16
8 C -0.15 0.24 7.48 31.18 0.23 0.47 16
9 C -0.10 0.32 4.00 -10.26 -0.04 0.28 16
10 H 0.10 -0.28 8.14 -2.39 -0.02 -0.30 16
11 C 0.06 -0.19 4.56 71.98 0.33 0.14 16
12 O -0.30 -0.28 9.46 -92.71 -0.88 -1.15 16
13 C 0.19 0.15 6.66 22.50 0.15 0.30 16
14 C -0.15 0.07 5.27 -19.76 -0.10 -0.04 16
15 C -0.07 0.07 2.38 71.24 0.17 0.24 16
16 O -0.54 -0.96 12.88 -148.98 -1.92 -2.88 16
17 Si 0.76 -2.39 30.24 68.60 2.07 -0.32 16
18 C -0.04 0.04 8.44 22.27 0.19 0.23 16
19 C -0.12 -0.27 6.33 22.37 0.14 -0.13 16
20 Cl -0.05 -0.18 28.61 -2.72 -0.08 -0.25 16
21 C 0.15 0.46 7.27 22.38 0.16 0.62 16
22 F -0.13 -0.74 16.83 44.97 0.76 0.01 16
23 C -0.24 -0.08 9.01 22.41 0.20 0.12 16
24 C -0.12 0.40 7.48 31.12 0.23 0.63 16
25 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16
26 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16
27 H 0.06 -0.18 6.24 -2.38 -0.01 -0.20 16
28 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16
29 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16
30 H 0.06 0.01 8.14 -2.38 -0.02 -0.01 16
31 H 0.06 -0.12 7.02 -2.39 -0.02 -0.14 16
32 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16
33 H 0.06 -0.01 8.14 -2.38 -0.02 -0.03 16
34 H 0.08 -0.02 7.92 -2.39 -0.02 -0.04 16
35 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16
36 H 0.08 -0.34 7.39 -2.39 -0.02 -0.36 16
37 H 0.08 -0.39 7.66 -2.39 -0.02 -0.41 16
38 H 0.12 -0.15 7.82 -2.39 -0.02 -0.17 16
39 H 0.38 -1.63 8.70 -74.06 -0.64 -2.27 16
40 H -0.27 0.26 6.69 99.48 0.67 0.92 16
41 H -0.30 -1.30 7.11 99.48 0.71 -0.59 16
42 H 0.17 -0.68 4.85 -2.91 -0.01 -0.69 16
43 H 0.17 -0.53 6.30 -2.91 -0.02 -0.55 16
44 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16
45 H 0.09 -0.25 8.10 -2.39 -0.02 -0.27 16
Total: 0.00 -10.98 379.22 2.41 -8.57
By element:
Atomic # 1 Polarization: -7.27 SS G_CDS: 0.36 Total: -6.91 kcal
Atomic # 6 Polarization: 1.88 SS G_CDS: 3.58 Total: 5.47 kcal
Atomic # 8 Polarization: -2.29 SS G_CDS: -4.29 Total: -6.57 kcal
Atomic # 9 Polarization: -0.74 SS G_CDS: 0.76 Total: 0.01 kcal
Atomic # 14 Polarization: -2.39 SS G_CDS: 2.07 Total: -0.32 kcal
Atomic # 17 Polarization: -0.18 SS G_CDS: -0.08 Total: -0.25 kcal
Total: -10.98 2.41 -8.57 kcal
The number of atoms in the molecule is 45
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
s_7_10548606_14598384.mol2 45
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -100.238 kcal
(2) G-P(sol) polarization free energy of solvation -10.981 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.219 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.412 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -8.569 kcal
(6) G-S(sol) free energy of system = (1) + (5) -108.807 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 0.96 seconds