Wall clock time and date at job start Mon Mar 8 2021 12:19:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 C 1.53005 * 109.46939 * 2 1 4 4 C 1.52995 * 109.47373 * 240.00058 * 2 1 3 5 5 O 1.45201 * 109.47159 * 119.99860 * 2 1 3 6 6 C 1.34626 * 117.00108 * 60.00650 * 5 2 1 7 7 O 1.21513 * 119.99942 * 359.97438 * 6 5 2 8 8 N 1.34776 * 120.00021 * 180.02562 * 6 5 2 9 9 C 1.46506 * 119.99831 * 179.97438 * 8 6 5 10 10 H 1.08997 * 112.85420 * 23.80069 * 9 8 6 11 11 C 1.53781 * 113.61405 * 154.99784 * 9 8 6 12 12 C 1.53786 * 87.17350 * 140.02258 * 11 9 8 13 13 H 1.08993 * 113.61491 * 89.15923 * 12 11 9 14 14 C 1.52999 * 113.61361 * 220.06273 * 12 11 9 15 15 O 1.42904 * 109.47219 * 184.99801 * 14 12 11 16 16 C 1.35921 * 116.99796 * 180.02562 * 15 14 12 17 17 C 1.38705 * 120.02604 * 180.02562 * 16 15 14 18 18 C 1.50702 * 120.00087 * 359.97438 * 17 16 15 19 19 O 1.42904 * 109.46891 * 285.00095 * 18 17 16 20 20 Si 1.86300 * 109.47354 * 165.00184 * 18 17 16 21 21 C 1.38190 * 120.00486 * 179.97438 * 17 16 15 22 22 C 1.38291 * 120.06568 * 359.97438 * 21 17 16 23 23 Cl 1.73603 * 119.97187 * 180.02562 * 22 21 17 24 24 C 1.38617 * 120.06128 * 359.97322 * 22 21 17 25 25 F 1.35095 * 120.00347 * 180.02562 * 24 22 21 26 26 C 1.38326 * 119.99494 * 359.81635 * 24 22 21 27 27 C 1.53782 * 113.68817 * 252.53351 * 9 8 6 28 28 H 1.09005 * 109.47550 * 299.99843 * 1 2 3 29 29 H 1.08996 * 109.47695 * 60.00060 * 1 2 3 30 30 H 1.09002 * 109.47152 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47457 * 179.97438 * 3 2 1 32 32 H 1.09004 * 109.47113 * 300.00297 * 3 2 1 33 33 H 1.09005 * 109.46871 * 59.99741 * 3 2 1 34 34 H 1.09002 * 109.46975 * 300.00100 * 4 2 1 35 35 H 1.09004 * 109.46806 * 59.99626 * 4 2 1 36 36 H 1.09005 * 109.47447 * 179.97438 * 4 2 1 37 37 H 0.96990 * 120.00286 * 359.97438 * 8 6 5 38 38 H 1.09002 * 113.61445 * 254.61257 * 11 9 8 39 39 H 1.09002 * 113.61408 * 25.42988 * 11 9 8 40 40 H 1.09002 * 109.47053 * 305.00261 * 14 12 11 41 41 H 1.09004 * 109.47121 * 64.99898 * 14 12 11 42 42 H 1.09002 * 109.47335 * 44.99675 * 18 17 16 43 43 H 0.96698 * 114.00153 * 59.99421 * 19 18 17 44 44 H 1.48503 * 109.99678 * 299.99413 * 20 18 17 45 45 H 1.48501 * 110.00076 * 61.31474 * 20 18 17 46 46 H 1.07995 * 119.96752 * 179.97438 * 21 17 16 47 47 H 1.07998 * 120.03368 * 180.20504 * 26 24 22 48 48 H 1.08997 * 113.61668 * 334.55345 * 27 9 8 49 49 H 1.08998 * 113.61674 * 105.37854 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6523 -1.9722 1.3383 7 8 0.9510 -2.5094 0.5040 8 7 2.0673 -2.6653 2.4172 9 6 1.6733 -4.0665 2.5836 10 1 1.4210 -4.5503 1.6401 11 6 2.6462 -4.8809 3.4526 12 6 1.4100 -5.5558 4.0700 13 1 1.0856 -6.4474 3.5336 14 6 1.5224 -5.7770 5.5798 15 8 0.3848 -6.5093 6.0399 16 6 0.3286 -6.7913 7.3684 17 6 -0.7475 -7.4995 7.8827 18 6 -1.8552 -7.9560 6.9686 19 8 -2.6751 -6.8389 6.6190 20 14 -2.8901 -9.2376 7.8388 21 6 -0.8039 -7.7864 9.2333 22 6 0.2121 -7.3687 10.0733 23 17 0.1391 -7.7312 11.7695 24 6 1.2893 -6.6618 9.5621 25 9 2.2814 -6.2547 10.3838 26 6 1.3505 -6.3769 8.2099 27 6 0.6262 -4.2868 3.6881 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1299 1.4427 0.0005 32 1 1.6765 1.9564 -0.8900 33 1 1.6765 1.9564 0.8900 34 1 1.6766 -1.7489 -1.2492 35 1 1.6766 -0.2073 -2.1392 36 1 3.1300 -0.7208 -1.2494 37 1 2.6268 -2.2364 3.0834 38 1 3.2761 -5.5627 2.8811 39 1 3.2119 -4.2747 4.1602 40 1 2.4297 -6.3404 5.7978 41 1 1.5630 -4.8127 6.0863 42 1 -1.4257 -8.3882 6.0648 43 1 -2.2011 -6.1310 6.1616 44 1 -2.0490 -10.4046 8.2075 45 1 -3.5071 -8.6514 9.0557 46 1 -1.6422 -8.3375 9.6331 47 1 2.1911 -5.8291 7.8104 48 1 0.6385 -3.5185 4.4611 49 1 -0.3750 -4.4876 3.3068 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_10548606_15734236.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:19:50 Heat of formation + Delta-G solvation = -146.447275 kcal Electronic energy + Delta-G solvation = -33681.936364 eV Core-core repulsion = 28745.700113 eV Total energy + Delta-G solvation = -4936.236251 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.133 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -50.30522 -41.96957 -41.72749 -40.36739 -38.91735 -37.99568 -37.79631 -37.19245 -35.41594 -34.24796 -32.78327 -31.47907 -29.38165 -28.38330 -28.31812 -26.77596 -26.69597 -25.31070 -23.98496 -23.09720 -22.31837 -21.41142 -20.56931 -19.88948 -19.10689 -18.77146 -18.43897 -17.72760 -17.56713 -17.43876 -17.19345 -17.02287 -16.85561 -16.67970 -16.17253 -15.94287 -15.70456 -15.45434 -15.42330 -15.31648 -14.60574 -14.51442 -14.37758 -14.06877 -13.97948 -13.90418 -13.46146 -13.38506 -13.30395 -13.19188 -12.97194 -12.93726 -12.88154 -12.84316 -12.52120 -12.38969 -12.36095 -12.26846 -12.16304 -11.90138 -11.73290 -11.43526 -11.40893 -11.28493 -11.11445 -11.09372 -10.35441 -10.15525 -9.48938 -4.85344 -0.43916 -0.32229 0.75130 1.16216 1.31921 1.61589 1.72193 1.80233 1.90242 1.97991 2.68648 3.13016 3.17405 3.34878 3.39039 3.45394 3.59294 3.72653 3.74581 3.75687 3.79492 3.87083 3.92442 3.92906 4.13441 4.18961 4.24858 4.32520 4.38622 4.47314 4.50507 4.59335 4.59633 4.64408 4.71336 4.74280 4.74844 4.79660 4.79956 4.85535 4.86030 4.96737 5.03271 5.06857 5.11803 5.19253 5.25442 5.31013 5.49787 5.59328 5.99453 6.39310 6.61789 7.33477 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.642 3.358 7 O -0.595 6.595 8 N -0.690 5.690 9 C 0.131 3.869 10 H 0.104 0.896 11 C -0.121 4.121 12 C -0.097 4.097 13 H 0.110 0.890 14 C 0.058 3.942 15 O -0.300 6.300 16 C 0.188 3.812 17 C -0.151 4.151 18 C -0.074 4.074 19 O -0.543 6.543 20 Si 0.796 3.204 21 C -0.057 4.057 22 C -0.121 4.121 23 Cl -0.053 7.053 24 C 0.146 3.854 25 F -0.126 7.126 26 C -0.224 4.224 27 C -0.146 4.146 28 H 0.061 0.939 29 H 0.086 0.914 30 H 0.064 0.936 31 H 0.069 0.931 32 H 0.098 0.902 33 H 0.069 0.931 34 H 0.064 0.936 35 H 0.086 0.914 36 H 0.062 0.938 37 H 0.417 0.583 38 H 0.092 0.908 39 H 0.111 0.889 40 H 0.087 0.913 41 H 0.085 0.915 42 H 0.097 0.903 43 H 0.376 0.624 44 H -0.263 1.263 45 H -0.285 1.285 46 H 0.145 0.855 47 H 0.180 0.820 48 H 0.095 0.905 49 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.801 1.259 -3.798 4.884 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.395 3.605 7 O -0.486 6.486 8 N -0.349 5.349 9 C 0.027 3.973 10 H 0.122 0.878 11 C -0.159 4.159 12 C -0.116 4.116 13 H 0.128 0.872 14 C -0.016 4.016 15 O -0.212 6.212 16 C 0.140 3.860 17 C -0.153 4.153 18 C -0.183 4.183 19 O -0.350 6.350 20 Si 0.698 3.302 21 C -0.075 4.075 22 C -0.149 4.149 23 Cl -0.024 7.024 24 C 0.126 3.874 25 F -0.104 7.104 26 C -0.243 4.243 27 C -0.184 4.184 28 H 0.080 0.920 29 H 0.105 0.895 30 H 0.083 0.917 31 H 0.088 0.912 32 H 0.116 0.884 33 H 0.088 0.912 34 H 0.083 0.917 35 H 0.105 0.895 36 H 0.081 0.919 37 H 0.255 0.745 38 H 0.111 0.889 39 H 0.129 0.871 40 H 0.105 0.895 41 H 0.103 0.897 42 H 0.115 0.885 43 H 0.225 0.775 44 H -0.189 1.189 45 H -0.213 1.213 46 H 0.162 0.838 47 H 0.198 0.802 48 H 0.113 0.887 49 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges 1.805 0.221 -3.261 3.734 hybrid contribution 1.819 1.302 0.842 2.390 sum 3.624 1.522 -2.418 4.615 Atomic orbital electron populations 1.22470 0.94083 1.03705 1.03460 1.22332 0.94413 0.92559 0.81559 1.21895 1.02462 0.90953 1.04211 1.22473 1.01634 1.02265 0.97334 1.86308 1.71549 1.23454 1.47225 1.18462 0.78661 0.80753 0.82576 1.90906 1.42210 1.70922 1.44515 1.44772 1.54939 1.12319 1.22855 1.22584 0.97118 0.78522 0.99037 0.87837 1.23361 0.95970 0.98292 0.98280 1.22282 0.97913 0.98513 0.92843 0.87204 1.23249 0.87047 0.96418 0.94860 1.86116 1.46128 1.70645 1.18359 1.18414 0.91775 0.91995 0.83821 1.19873 0.98084 1.03456 0.93838 1.25230 0.95373 0.96147 1.01511 1.86710 1.37610 1.30473 1.80166 0.92297 0.83620 0.75457 0.78852 1.20724 0.96992 0.97842 0.91974 1.20885 0.98636 1.07921 0.87428 1.98399 1.98309 1.93613 1.12122 1.17218 0.85230 0.96570 0.88411 1.91564 1.58929 1.88033 1.71881 1.21395 1.03172 1.08705 0.91023 1.23653 0.98907 0.97528 0.98347 0.92003 0.89548 0.91733 0.91158 0.88382 0.91228 0.91728 0.89547 0.91918 0.74535 0.88912 0.87082 0.89510 0.89736 0.88495 0.77500 1.18861 1.21259 0.83775 0.80231 0.88686 0.91251 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.47 8.37 71.98 0.60 0.13 16 2 C 0.13 0.27 1.13 -10.80 -0.01 0.26 16 3 C -0.14 0.38 8.85 71.98 0.64 1.01 16 4 C -0.18 -0.43 8.37 71.98 0.60 0.17 16 5 O -0.37 -1.56 9.94 -55.35 -0.55 -2.11 16 6 C 0.64 3.14 8.06 129.79 1.05 4.19 16 7 O -0.59 -6.24 11.48 19.80 0.23 -6.02 16 8 N -0.69 1.77 5.36 -567.61 -3.04 -1.28 16 9 C 0.13 -0.65 4.24 45.52 0.19 -0.46 16 10 H 0.10 -0.07 7.46 -2.39 -0.02 -0.09 16 11 C -0.12 1.34 7.39 31.12 0.23 1.57 16 12 C -0.10 0.96 4.02 -10.20 -0.04 0.92 16 13 H 0.11 -1.00 8.14 -2.39 -0.02 -1.01 16 14 C 0.06 -0.58 4.58 71.98 0.33 -0.25 16 15 O -0.30 1.46 9.03 -92.66 -0.84 0.63 16 16 C 0.19 -0.25 6.62 22.49 0.15 -0.11 16 17 C -0.15 -0.24 5.28 -19.76 -0.10 -0.34 16 18 C -0.07 0.04 2.33 71.24 0.17 0.20 16 19 O -0.54 -0.55 12.65 -148.98 -1.89 -2.43 16 20 Si 0.80 -0.53 30.40 68.60 2.09 1.56 16 21 C -0.06 -0.24 8.43 22.27 0.19 -0.06 16 22 C -0.12 -0.66 6.33 22.37 0.14 -0.51 16 23 Cl -0.05 -0.36 28.61 -2.72 -0.08 -0.43 16 24 C 0.15 0.50 7.27 22.38 0.16 0.67 16 25 F -0.13 -0.67 16.83 44.97 0.76 0.08 16 26 C -0.22 0.38 9.01 22.40 0.20 0.59 16 27 C -0.15 0.99 7.44 31.18 0.23 1.22 16 28 H 0.06 0.12 8.14 -2.38 -0.02 0.10 16 29 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 30 H 0.06 0.50 5.88 -2.39 -0.01 0.49 16 31 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 32 H 0.10 -0.57 8.14 -2.38 -0.02 -0.59 16 33 H 0.07 -0.20 8.14 -2.38 -0.02 -0.22 16 34 H 0.06 0.49 5.88 -2.39 -0.01 0.47 16 35 H 0.09 -0.07 8.14 -2.38 -0.02 -0.09 16 36 H 0.06 0.10 8.14 -2.38 -0.02 0.08 16 37 H 0.42 -3.09 8.84 -92.72 -0.82 -3.91 16 38 H 0.09 -1.05 8.14 -2.39 -0.02 -1.07 16 39 H 0.11 -1.59 8.08 -2.39 -0.02 -1.60 16 40 H 0.09 -1.06 7.65 -2.39 -0.02 -1.07 16 41 H 0.08 -1.02 7.38 -2.38 -0.02 -1.04 16 42 H 0.10 -0.35 7.82 -2.39 -0.02 -0.36 16 43 H 0.38 -1.24 8.60 -74.06 -0.64 -1.88 16 44 H -0.26 -0.56 7.11 99.48 0.71 0.15 16 45 H -0.29 -1.50 6.81 99.48 0.68 -0.83 16 46 H 0.15 0.62 4.93 -2.91 -0.01 0.60 16 47 H 0.18 -1.38 6.30 -2.91 -0.02 -1.40 16 48 H 0.09 -0.74 7.90 -2.39 -0.02 -0.76 16 49 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 Total: 0.00 -16.39 414.08 0.96 -15.43 By element: Atomic # 1 Polarization: -14.18 SS G_CDS: -0.44 Total: -14.62 kcal Atomic # 6 Polarization: 4.47 SS G_CDS: 4.72 Total: 9.19 kcal Atomic # 7 Polarization: 1.77 SS G_CDS: -3.04 Total: -1.28 kcal Atomic # 8 Polarization: -6.88 SS G_CDS: -3.04 Total: -9.93 kcal Atomic # 9 Polarization: -0.67 SS G_CDS: 0.76 Total: 0.08 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: 2.09 Total: 1.56 kcal Atomic # 17 Polarization: -0.36 SS G_CDS: -0.08 Total: -0.43 kcal Total: -16.39 0.96 -15.43 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10548606_15734236.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.022 kcal (2) G-P(sol) polarization free energy of solvation -16.388 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -147.410 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.963 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.425 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.447 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds