Wall clock time and date at job start Mon Mar 8 2021 12:59:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.42899 * 114.00309 * 2 1 4 4 C 1.52998 * 112.85230 * 65.89553 * 3 2 1 5 5 F 1.39899 * 109.47003 * 283.58408 * 4 3 2 6 6 F 1.39906 * 109.47278 * 43.58101 * 4 3 2 7 7 F 1.39894 * 109.47378 * 163.58171 * 4 3 2 8 8 C 1.53782 * 113.61308 * 294.69868 * 3 2 1 9 9 C 1.53785 * 87.08181 * 270.88439 * 8 3 2 10 10 H 1.08996 * 113.61374 * 219.93562 * 9 8 3 11 11 C 1.52994 * 113.61594 * 89.11274 * 9 8 3 12 12 O 1.42903 * 109.47291 * 176.52878 * 11 9 8 13 13 C 1.35921 * 116.99960 * 180.02562 * 12 11 9 14 14 C 1.38706 * 120.02860 * 180.25434 * 13 12 11 15 15 C 1.50701 * 120.00111 * 0.02699 * 14 13 12 16 16 O 1.42905 * 109.46811 * 285.23313 * 15 14 13 17 17 Si 1.86291 * 109.47398 * 165.23166 * 15 14 13 18 18 C 1.38192 * 120.00362 * 180.25330 * 14 13 12 19 19 C 1.38288 * 120.06414 * 359.49157 * 18 14 13 20 20 Cl 1.73605 * 119.96840 * 180.27344 * 19 18 14 21 21 C 1.38611 * 120.06523 * 0.25963 * 19 18 14 22 22 F 1.35105 * 120.00535 * 179.97438 * 21 19 18 23 23 C 1.38325 * 119.99257 * 359.97438 * 21 19 18 24 24 C 1.53785 * 87.17279 * 334.52426 * 9 8 3 25 25 H 1.09005 * 109.47465 * 296.90847 * 1 2 3 26 26 H 1.09008 * 109.47133 * 56.90400 * 1 2 3 27 27 H 1.08997 * 109.47365 * 176.90575 * 1 2 3 28 28 H 1.08997 * 113.61434 * 156.33396 * 8 3 2 29 29 H 1.08995 * 113.61158 * 25.43022 * 8 3 2 30 30 H 1.09005 * 109.47196 * 56.53336 * 11 9 8 31 31 H 1.09002 * 109.47597 * 296.53124 * 11 9 8 32 32 H 1.09001 * 109.47473 * 45.22418 * 15 14 13 33 33 H 0.96694 * 114.00599 * 59.99274 * 16 15 14 34 34 H 1.48510 * 110.00144 * 178.67921 * 17 15 14 35 35 H 1.48497 * 110.00034 * 299.99395 * 17 15 14 36 36 H 1.07995 * 119.96542 * 179.76750 * 18 14 13 37 37 H 1.08005 * 120.03414 * 179.97438 * 23 21 19 38 38 H 1.09001 * 113.61622 * 140.02366 * 24 9 8 39 39 H 1.09001 * 113.61539 * 270.93094 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7259 2.0824 1.2870 5 9 0.4091 2.5545 1.2654 6 9 1.9009 1.2389 2.3893 7 9 2.6076 3.1643 1.3830 8 6 1.7229 2.1076 -1.2802 9 6 2.9996 1.4810 -1.8653 10 1 3.5964 2.1765 -2.4554 11 6 2.7570 0.1507 -2.5809 12 8 3.9807 -0.3103 -3.1572 13 6 3.9386 -1.4879 -3.8347 14 6 5.0913 -1.9967 -4.4147 15 6 6.3912 -1.2440 -4.2934 16 8 6.3695 -0.1122 -5.1656 17 14 7.8035 -2.3639 -4.7642 18 6 5.0467 -3.1913 -5.1079 19 6 3.8559 -3.8861 -5.2151 20 17 3.8043 -5.3902 -6.0804 21 6 2.7034 -3.3828 -4.6322 22 9 1.5405 -4.0623 -4.7382 23 6 2.7440 -2.1848 -3.9419 24 6 3.4930 1.3206 -0.4176 25 1 -0.3634 0.4651 0.9164 26 1 -0.3634 0.5612 -0.8610 27 1 -0.3634 -1.0261 -0.0555 28 1 1.7894 3.1869 -1.1432 29 1 0.8114 1.8003 -1.7926 30 1 2.0153 0.2912 -3.3674 31 1 2.3923 -0.5859 -1.8650 32 1 6.5217 -0.9075 -3.2648 33 1 5.6580 0.5151 -4.9783 34 1 9.0885 -1.6242 -4.6794 35 1 7.8371 -3.5448 -3.8644 36 1 5.9438 -3.5850 -5.5624 37 1 1.8463 -1.7918 -3.4878 38 1 4.0095 0.3784 -0.2341 39 1 4.0425 2.1852 -0.0452 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_10548606_17321600.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:59:59 Heat of formation + Delta-G solvation = -252.192586 kcal Electronic energy + Delta-G solvation = -32805.034590 eV Core-core repulsion = 27434.798051 eV Total energy + Delta-G solvation = -5370.236538 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.063 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -51.26284 -50.12479 -48.81058 -48.69396 -42.10363 -41.27183 -38.99864 -37.85045 -37.34071 -37.03447 -32.72012 -31.66617 -30.42309 -28.47616 -27.61447 -27.04984 -26.70056 -24.42413 -23.39032 -22.88601 -20.82479 -20.12211 -19.70458 -19.53375 -19.35187 -18.65301 -18.26664 -17.64809 -17.42068 -17.35423 -16.99759 -16.75866 -16.67569 -16.12502 -15.84144 -15.69094 -15.65924 -15.59777 -15.56470 -15.18921 -15.00062 -14.88371 -14.77632 -14.50884 -14.45830 -14.26822 -13.98124 -13.81114 -13.60194 -13.45919 -13.21649 -13.03461 -12.85721 -12.41778 -12.27502 -12.15968 -12.05618 -11.89483 -11.75581 -11.42444 -11.21386 -11.02249 -10.24683 -9.41098 -4.93793 -0.32584 -0.21930 0.93114 1.31959 1.44168 1.58152 1.63394 1.85025 1.96916 2.06854 2.40568 2.50984 2.69738 2.79763 3.03320 3.20270 3.23003 3.33636 3.38812 3.46811 3.63127 3.80203 3.90882 3.91581 3.95575 4.02289 4.08088 4.13723 4.17865 4.19348 4.33152 4.40072 4.41155 4.50426 4.53095 4.55839 4.68295 4.69773 4.78754 5.17220 5.46546 5.89264 6.50080 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.333 6.333 3 C 0.038 3.962 4 C 0.437 3.563 5 F -0.181 7.181 6 F -0.174 7.174 7 F -0.174 7.174 8 C -0.142 4.142 9 C -0.099 4.099 10 H 0.109 0.891 11 C 0.064 3.936 12 O -0.302 6.302 13 C 0.179 3.821 14 C -0.145 4.145 15 C -0.067 4.067 16 O -0.532 6.532 17 Si 0.736 3.264 18 C -0.034 4.034 19 C -0.106 4.106 20 Cl -0.040 7.040 21 C 0.158 3.842 22 F -0.119 7.119 23 C -0.232 4.232 24 C -0.112 4.112 25 H 0.055 0.945 26 H 0.056 0.944 27 H 0.103 0.897 28 H 0.115 0.885 29 H 0.095 0.905 30 H 0.073 0.927 31 H 0.089 0.911 32 H 0.080 0.920 33 H 0.367 0.633 34 H -0.250 1.250 35 H -0.246 1.246 36 H 0.156 0.844 37 H 0.152 0.848 38 H 0.099 0.901 39 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.235 1.975 -1.460 2.748 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 O -0.251 6.251 3 C -0.005 4.005 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.179 4.179 9 C -0.117 4.117 10 H 0.127 0.873 11 C -0.010 4.010 12 O -0.215 6.215 13 C 0.132 3.868 14 C -0.146 4.146 15 C -0.175 4.175 16 O -0.337 6.337 17 Si 0.634 3.366 18 C -0.052 4.052 19 C -0.134 4.134 20 Cl -0.011 7.011 21 C 0.138 3.862 22 F -0.097 7.097 23 C -0.252 4.252 24 C -0.149 4.149 25 H 0.073 0.927 26 H 0.074 0.926 27 H 0.121 0.879 28 H 0.133 0.867 29 H 0.114 0.886 30 H 0.091 0.909 31 H 0.107 0.893 32 H 0.098 0.902 33 H 0.215 0.785 34 H -0.175 1.175 35 H -0.171 1.171 36 H 0.173 0.827 37 H 0.170 0.830 38 H 0.117 0.883 39 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges 0.215 1.123 -1.448 1.845 hybrid contribution -1.984 0.945 1.553 2.691 sum -1.769 2.069 0.106 2.724 Atomic orbital electron populations 1.23169 0.79332 1.04485 1.01707 1.88078 1.21259 1.21926 1.93852 1.24111 1.00000 0.86328 0.90052 1.21137 0.74357 0.78735 0.87508 1.93197 1.36891 1.89353 1.96815 1.93228 1.94955 1.70675 1.56620 1.93184 1.68858 1.56958 1.96566 1.23591 0.99430 1.01297 0.93617 1.22066 0.97788 0.96136 0.95705 0.87301 1.22914 0.84777 0.95957 0.97376 1.86032 1.35545 1.34124 1.65823 1.18441 0.92338 0.85398 0.90598 1.19691 0.95360 0.97006 1.02578 1.25305 1.01758 0.93077 0.97372 1.86754 1.55894 1.33744 1.57319 0.93072 0.75042 0.78246 0.90237 1.20599 0.96436 0.92511 0.95643 1.20776 0.94376 0.93237 1.05008 1.98415 1.98686 1.29326 1.74657 1.17048 0.81035 0.90750 0.97410 1.91588 1.45509 1.78702 1.93901 1.21147 0.99643 0.96831 1.07558 1.23322 0.90898 1.05876 0.94776 0.92654 0.92566 0.87870 0.86708 0.88608 0.90882 0.89314 0.90234 0.78536 1.17477 1.17076 0.82723 0.83002 0.88266 0.86378 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.33 101.05 1.04 1.02 16 2 O -0.33 0.37 8.33 -35.23 -0.29 0.08 16 3 C 0.04 -0.07 0.85 -89.66 -0.08 -0.15 16 4 C 0.44 0.06 2.51 37.16 0.09 0.16 16 5 F -0.18 -0.09 15.37 2.25 0.03 -0.05 16 6 F -0.17 -0.37 17.09 2.25 0.04 -0.33 16 7 F -0.17 -0.05 15.83 2.25 0.04 -0.02 16 8 C -0.14 0.56 6.51 -25.92 -0.17 0.39 16 9 C -0.10 0.38 4.19 -89.81 -0.38 0.00 16 10 H 0.11 -0.50 8.14 -51.93 -0.42 -0.92 16 11 C 0.06 -0.20 4.34 37.15 0.16 -0.04 16 12 O -0.30 0.46 9.02 -19.49 -0.18 0.28 16 13 C 0.18 -0.09 6.61 -39.23 -0.26 -0.34 16 14 C -0.14 0.03 5.28 -104.47 -0.55 -0.53 16 15 C -0.07 0.02 2.33 36.01 0.08 0.10 16 16 O -0.53 -0.15 12.65 -35.23 -0.45 -0.60 16 17 Si 0.74 -0.48 30.17 -169.99 -5.13 -5.61 16 18 C -0.03 0.01 8.44 -39.58 -0.33 -0.32 16 19 C -0.11 -0.09 6.33 -39.43 -0.25 -0.34 16 20 Cl -0.04 -0.05 28.61 -51.86 -1.48 -1.53 16 21 C 0.16 0.16 7.27 -39.41 -0.29 -0.13 16 22 F -0.12 -0.25 16.83 2.25 0.04 -0.21 16 23 C -0.23 0.11 9.01 -39.37 -0.35 -0.24 16 24 C -0.11 0.31 6.92 -25.77 -0.18 0.13 16 25 H 0.05 -0.10 6.60 -51.93 -0.34 -0.44 16 26 H 0.06 -0.23 6.60 -51.92 -0.34 -0.58 16 27 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 28 H 0.11 -0.52 8.06 -51.93 -0.42 -0.94 16 29 H 0.10 -0.46 6.64 -51.93 -0.34 -0.81 16 30 H 0.07 -0.31 7.66 -51.93 -0.40 -0.71 16 31 H 0.09 -0.23 5.61 -51.93 -0.29 -0.52 16 32 H 0.08 -0.03 7.83 -51.93 -0.41 -0.44 16 33 H 0.37 -0.70 8.57 45.56 0.39 -0.31 16 34 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 35 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 36 H 0.16 -0.36 5.12 -52.49 -0.27 -0.63 16 37 H 0.15 -0.35 6.30 -52.48 -0.33 -0.68 16 38 H 0.10 -0.20 8.10 -51.93 -0.42 -0.62 16 39 H 0.12 -0.40 7.02 -51.93 -0.36 -0.77 16 LS Contribution 349.44 15.07 5.27 5.27 Total: 0.00 -4.93 349.44 -7.15 -12.08 By element: Atomic # 1 Polarization: -5.49 SS G_CDS: -3.58 Total: -9.07 kcal Atomic # 6 Polarization: 1.17 SS G_CDS: -1.45 Total: -0.29 kcal Atomic # 8 Polarization: 0.67 SS G_CDS: -0.92 Total: -0.24 kcal Atomic # 9 Polarization: -0.75 SS G_CDS: 0.15 Total: -0.61 kcal Atomic # 14 Polarization: -0.48 SS G_CDS: -5.13 Total: -5.61 kcal Atomic # 17 Polarization: -0.05 SS G_CDS: -1.48 Total: -1.53 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -4.93 -7.15 -12.08 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10548606_17321600.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -240.112 kcal (2) G-P(sol) polarization free energy of solvation -4.933 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -245.044 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.148 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.081 kcal (6) G-S(sol) free energy of system = (1) + (5) -252.193 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds