Wall clock time and date at job start Mon Mar 8 2021 12:59:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.42899 * 114.00309 * 2 1 4 4 C 1.52998 * 112.85230 * 65.89553 * 3 2 1 5 5 F 1.39899 * 109.47003 * 283.58408 * 4 3 2 6 6 F 1.39906 * 109.47278 * 43.58101 * 4 3 2 7 7 F 1.39894 * 109.47378 * 163.58171 * 4 3 2 8 8 C 1.53782 * 113.61308 * 294.69868 * 3 2 1 9 9 C 1.53785 * 87.08181 * 270.88439 * 8 3 2 10 10 H 1.08996 * 113.61374 * 219.93562 * 9 8 3 11 11 C 1.52994 * 113.61594 * 89.11274 * 9 8 3 12 12 O 1.42903 * 109.47291 * 176.52878 * 11 9 8 13 13 C 1.35921 * 116.99960 * 180.02562 * 12 11 9 14 14 C 1.38706 * 120.02860 * 180.25434 * 13 12 11 15 15 C 1.50701 * 120.00111 * 0.02699 * 14 13 12 16 16 O 1.42905 * 109.46811 * 285.23313 * 15 14 13 17 17 Si 1.86291 * 109.47398 * 165.23166 * 15 14 13 18 18 C 1.38192 * 120.00362 * 180.25330 * 14 13 12 19 19 C 1.38288 * 120.06414 * 359.49157 * 18 14 13 20 20 Cl 1.73605 * 119.96840 * 180.27344 * 19 18 14 21 21 C 1.38611 * 120.06523 * 0.25963 * 19 18 14 22 22 F 1.35105 * 120.00535 * 179.97438 * 21 19 18 23 23 C 1.38325 * 119.99257 * 359.97438 * 21 19 18 24 24 C 1.53785 * 87.17279 * 334.52426 * 9 8 3 25 25 H 1.09005 * 109.47465 * 296.90847 * 1 2 3 26 26 H 1.09008 * 109.47133 * 56.90400 * 1 2 3 27 27 H 1.08997 * 109.47365 * 176.90575 * 1 2 3 28 28 H 1.08997 * 113.61434 * 156.33396 * 8 3 2 29 29 H 1.08995 * 113.61158 * 25.43022 * 8 3 2 30 30 H 1.09005 * 109.47196 * 56.53336 * 11 9 8 31 31 H 1.09002 * 109.47597 * 296.53124 * 11 9 8 32 32 H 1.09001 * 109.47473 * 45.22418 * 15 14 13 33 33 H 0.96694 * 114.00599 * 59.99274 * 16 15 14 34 34 H 1.48510 * 110.00144 * 178.67921 * 17 15 14 35 35 H 1.48497 * 110.00034 * 299.99395 * 17 15 14 36 36 H 1.07995 * 119.96542 * 179.76750 * 18 14 13 37 37 H 1.08005 * 120.03414 * 179.97438 * 23 21 19 38 38 H 1.09001 * 113.61622 * 140.02366 * 24 9 8 39 39 H 1.09001 * 113.61539 * 270.93094 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7259 2.0824 1.2870 5 9 0.4091 2.5545 1.2654 6 9 1.9009 1.2389 2.3893 7 9 2.6076 3.1643 1.3830 8 6 1.7229 2.1076 -1.2802 9 6 2.9996 1.4810 -1.8653 10 1 3.5964 2.1765 -2.4554 11 6 2.7570 0.1507 -2.5809 12 8 3.9807 -0.3103 -3.1572 13 6 3.9386 -1.4879 -3.8347 14 6 5.0913 -1.9967 -4.4147 15 6 6.3912 -1.2440 -4.2934 16 8 6.3695 -0.1122 -5.1656 17 14 7.8035 -2.3639 -4.7642 18 6 5.0467 -3.1913 -5.1079 19 6 3.8559 -3.8861 -5.2151 20 17 3.8043 -5.3902 -6.0804 21 6 2.7034 -3.3828 -4.6322 22 9 1.5405 -4.0623 -4.7382 23 6 2.7440 -2.1848 -3.9419 24 6 3.4930 1.3206 -0.4176 25 1 -0.3634 0.4651 0.9164 26 1 -0.3634 0.5612 -0.8610 27 1 -0.3634 -1.0261 -0.0555 28 1 1.7894 3.1869 -1.1432 29 1 0.8114 1.8003 -1.7926 30 1 2.0153 0.2912 -3.3674 31 1 2.3923 -0.5859 -1.8650 32 1 6.5217 -0.9075 -3.2648 33 1 5.6580 0.5151 -4.9783 34 1 9.0885 -1.6242 -4.6794 35 1 7.8371 -3.5448 -3.8644 36 1 5.9438 -3.5850 -5.5624 37 1 1.8463 -1.7918 -3.4878 38 1 4.0095 0.3784 -0.2341 39 1 4.0425 2.1852 -0.0452 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_10548606_17321600.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:59:58 Heat of formation + Delta-G solvation = -245.835442 kcal Electronic energy + Delta-G solvation = -32804.758923 eV Core-core repulsion = 27434.798051 eV Total energy + Delta-G solvation = -5369.960872 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.063 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -51.28115 -50.19110 -48.81595 -48.75701 -41.93963 -41.12753 -38.90405 -37.84985 -37.22216 -36.94839 -32.68346 -31.56351 -30.29289 -28.23017 -27.48845 -26.80514 -26.66164 -24.33852 -23.27073 -22.83344 -20.63842 -20.03291 -19.64614 -19.54065 -19.27876 -18.62611 -18.20955 -17.52778 -17.36007 -17.22545 -16.96149 -16.70287 -16.49884 -15.98890 -15.70020 -15.68779 -15.63311 -15.59980 -15.53078 -15.20539 -15.00753 -14.92776 -14.71013 -14.51645 -14.35751 -14.18701 -13.90481 -13.75389 -13.43693 -13.23394 -13.16925 -12.83303 -12.65848 -12.28349 -12.18195 -12.11066 -12.00163 -11.66457 -11.64724 -11.39619 -11.19112 -10.83623 -10.21161 -9.37887 -4.91097 -0.31075 -0.17463 0.91388 1.34351 1.51358 1.61998 1.77642 1.95768 2.05709 2.10438 2.54587 2.60515 2.81089 2.86897 3.27485 3.30484 3.33652 3.44727 3.47067 3.68910 3.69496 3.89034 4.05659 4.20109 4.21163 4.24436 4.25321 4.34734 4.41729 4.46986 4.49684 4.58312 4.62172 4.68860 4.72888 4.77647 4.80915 4.83101 5.01080 5.23209 5.68118 6.02468 6.63962 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.003 3.997 2 O -0.345 6.345 3 C 0.034 3.966 4 C 0.431 3.569 5 F -0.185 7.185 6 F -0.190 7.190 7 F -0.177 7.177 8 C -0.133 4.133 9 C -0.090 4.090 10 H 0.121 0.879 11 C 0.060 3.940 12 O -0.303 6.303 13 C 0.181 3.819 14 C -0.150 4.150 15 C -0.068 4.068 16 O -0.542 6.542 17 Si 0.792 3.208 18 C -0.035 4.035 19 C -0.116 4.116 20 Cl -0.048 7.048 21 C 0.144 3.856 22 F -0.129 7.129 23 C -0.228 4.228 24 C -0.115 4.115 25 H 0.042 0.958 26 H 0.074 0.926 27 H 0.112 0.888 28 H 0.123 0.877 29 H 0.109 0.891 30 H 0.090 0.910 31 H 0.083 0.917 32 H 0.082 0.918 33 H 0.377 0.623 34 H -0.291 1.291 35 H -0.263 1.263 36 H 0.171 0.829 37 H 0.169 0.831 38 H 0.089 0.911 39 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.623 2.701 -2.089 3.780 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 O -0.263 6.263 3 C -0.009 4.009 4 C 0.376 3.624 5 F -0.166 7.166 6 F -0.171 7.171 7 F -0.158 7.158 8 C -0.170 4.170 9 C -0.108 4.108 10 H 0.140 0.860 11 C -0.014 4.014 12 O -0.216 6.216 13 C 0.134 3.866 14 C -0.151 4.151 15 C -0.176 4.176 16 O -0.349 6.349 17 Si 0.694 3.306 18 C -0.053 4.053 19 C -0.144 4.144 20 Cl -0.020 7.020 21 C 0.123 3.877 22 F -0.107 7.107 23 C -0.248 4.248 24 C -0.152 4.152 25 H 0.061 0.939 26 H 0.092 0.908 27 H 0.130 0.870 28 H 0.141 0.859 29 H 0.127 0.873 30 H 0.108 0.892 31 H 0.101 0.899 32 H 0.099 0.901 33 H 0.226 0.774 34 H -0.218 1.218 35 H -0.188 1.188 36 H 0.188 0.812 37 H 0.187 0.813 38 H 0.108 0.892 39 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -0.198 1.855 -2.078 2.793 hybrid contribution -1.846 0.782 1.826 2.712 sum -2.044 2.638 -0.251 3.346 Atomic orbital electron populations 1.23290 0.78730 1.05301 1.01863 1.88067 1.22029 1.22410 1.93832 1.24303 1.00679 0.86299 0.89616 1.21593 0.74134 0.78742 0.87929 1.93183 1.37192 1.89422 1.96831 1.93189 1.95040 1.71184 1.57726 1.93171 1.68910 1.57135 1.96612 1.23630 0.99953 1.01490 0.91975 1.22015 0.97856 0.96001 0.94907 0.86043 1.23064 0.84541 0.96066 0.97779 1.86040 1.36502 1.33529 1.65532 1.18481 0.92167 0.85665 0.90314 1.19751 0.95542 0.97066 1.02750 1.25325 1.01815 0.93120 0.97383 1.86717 1.56564 1.34089 1.57524 0.92367 0.72541 0.76484 0.89238 1.20781 0.96685 0.92393 0.95471 1.20877 0.94843 0.93196 1.05505 1.98407 1.98720 1.29929 1.74898 1.17257 0.80800 0.91394 0.98231 1.91559 1.46030 1.79028 1.94090 1.21292 1.00345 0.96180 1.06980 1.23397 0.90409 1.05634 0.95786 0.93912 0.90788 0.87003 0.85853 0.87302 0.89213 0.89860 0.90093 0.77373 1.21779 1.18841 0.81198 0.81325 0.89225 0.85882 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.02 10.33 113.37 1.17 1.15 16 2 O -0.35 0.83 8.33 -148.98 -1.24 -0.42 16 3 C 0.03 -0.13 0.85 -10.17 -0.01 -0.14 16 4 C 0.43 0.28 2.51 71.98 0.18 0.46 16 5 F -0.18 -0.23 15.37 44.97 0.69 0.46 16 6 F -0.19 -1.01 17.09 44.97 0.77 -0.24 16 7 F -0.18 -0.14 15.83 44.97 0.71 0.57 16 8 C -0.13 1.25 6.51 31.12 0.20 1.45 16 9 C -0.09 0.82 4.19 -10.27 -0.04 0.78 16 10 H 0.12 -1.37 8.14 -2.39 -0.02 -1.39 16 11 C 0.06 -0.46 4.34 71.98 0.31 -0.15 16 12 O -0.30 1.28 9.02 -92.66 -0.84 0.45 16 13 C 0.18 -0.32 6.61 22.49 0.15 -0.17 16 14 C -0.15 0.13 5.28 -19.76 -0.10 0.03 16 15 C -0.07 0.07 2.33 71.24 0.17 0.23 16 16 O -0.54 0.07 12.65 -148.98 -1.89 -1.81 16 17 Si 0.79 -0.90 30.17 68.60 2.07 1.17 16 18 C -0.04 0.03 8.44 22.27 0.19 0.22 16 19 C -0.12 -0.21 6.33 22.37 0.14 -0.07 16 20 Cl -0.05 -0.14 28.61 -2.72 -0.08 -0.22 16 21 C 0.14 0.28 7.27 22.38 0.16 0.45 16 22 F -0.13 -0.57 16.83 44.97 0.76 0.18 16 23 C -0.23 0.39 9.01 22.40 0.20 0.59 16 24 C -0.12 0.67 6.92 31.22 0.22 0.89 16 25 H 0.04 -0.13 6.60 -2.38 -0.02 -0.14 16 26 H 0.07 -0.70 6.60 -2.38 -0.02 -0.72 16 27 H 0.11 -0.87 8.14 -2.39 -0.02 -0.89 16 28 H 0.12 -1.33 8.06 -2.39 -0.02 -1.35 16 29 H 0.11 -1.29 6.64 -2.39 -0.02 -1.30 16 30 H 0.09 -0.97 7.66 -2.38 -0.02 -0.98 16 31 H 0.08 -0.51 5.61 -2.39 -0.01 -0.53 16 32 H 0.08 -0.10 7.83 -2.39 -0.02 -0.12 16 33 H 0.38 -1.83 8.57 -74.06 -0.63 -2.47 16 34 H -0.29 -1.62 7.11 99.48 0.71 -0.92 16 35 H -0.26 -0.40 7.11 99.48 0.71 0.31 16 36 H 0.17 -0.85 5.12 -2.91 -0.01 -0.86 16 37 H 0.17 -0.98 6.30 -2.91 -0.02 -1.00 16 38 H 0.09 -0.34 8.10 -2.39 -0.02 -0.36 16 39 H 0.12 -0.87 7.02 -2.39 -0.02 -0.89 16 Total: 0.00 -12.21 349.44 4.45 -7.76 By element: Atomic # 1 Polarization: -14.16 SS G_CDS: 0.55 Total: -13.61 kcal Atomic # 6 Polarization: 2.77 SS G_CDS: 2.94 Total: 5.71 kcal Atomic # 8 Polarization: 2.18 SS G_CDS: -3.96 Total: -1.78 kcal Atomic # 9 Polarization: -1.96 SS G_CDS: 2.93 Total: 0.97 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: 2.07 Total: 1.17 kcal Atomic # 17 Polarization: -0.14 SS G_CDS: -0.08 Total: -0.22 kcal Total: -12.21 4.45 -7.76 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10548606_17321600.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -238.077 kcal (2) G-P(sol) polarization free energy of solvation -12.207 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -250.284 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.449 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -7.758 kcal (6) G-S(sol) free energy of system = (1) + (5) -245.835 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds