Wall clock time and date at job start Mon Mar 8 2021 13:26:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86300 * 1 3 3 C 1.86302 * 109.47095 * 2 1 4 4 C 1.86297 * 109.47167 * 239.99905 * 2 1 3 5 5 C 1.86800 * 109.47125 * 120.00050 * 2 1 3 6 6 C 1.38226 * 120.00033 * 89.99956 * 5 2 1 7 7 C 1.38243 * 120.00044 * 180.02562 * 6 5 2 8 8 C 1.38232 * 119.99640 * 359.97438 * 7 6 5 9 9 C 1.50706 * 119.99576 * 179.97438 * 8 7 6 10 10 O 1.42899 * 109.47061 * 89.99980 * 9 8 7 11 11 C 1.35921 * 116.99777 * 179.97438 * 10 9 8 12 12 C 1.38670 * 120.02999 * 0.02562 * 11 10 9 13 13 C 1.38375 * 119.93004 * 179.97438 * 12 11 10 14 14 F 1.35104 * 119.99994 * 180.02562 * 13 12 11 15 15 C 1.38565 * 119.99603 * 359.97438 * 13 12 11 16 16 Cl 1.73597 * 119.96991 * 179.97438 * 15 13 12 17 17 C 1.38336 * 120.06385 * 0.02562 * 15 13 12 18 18 C 1.38151 * 120.06346 * 359.97363 * 17 15 13 19 19 C 1.50699 * 119.99444 * 180.02562 * 18 17 15 20 20 O 1.42901 * 109.47543 * 104.99958 * 19 18 17 21 21 Si 1.86305 * 109.47278 * 344.99905 * 19 18 17 22 22 H 1.48498 * 109.46833 * 180.02562 * 21 19 18 23 23 H 1.48502 * 109.46803 * 300.00332 * 21 19 18 24 24 H 1.48493 * 109.47103 * 60.00041 * 21 19 18 25 25 C 1.38229 * 120.00515 * 0.25890 * 8 7 6 26 26 C 1.38237 * 119.99472 * 359.49000 * 25 8 7 27 27 H 1.09002 * 109.47387 * 299.99994 * 1 2 3 28 28 H 1.09000 * 109.47161 * 59.99725 * 1 2 3 29 29 H 1.08998 * 109.47693 * 180.02562 * 1 2 3 30 30 H 1.08993 * 109.47029 * 180.02562 * 3 2 1 31 31 H 1.09000 * 109.46888 * 299.99881 * 3 2 1 32 32 H 1.09002 * 109.46998 * 59.99768 * 3 2 1 33 33 H 1.09006 * 109.47048 * 300.00489 * 4 2 1 34 34 H 1.09000 * 109.47236 * 59.99861 * 4 2 1 35 35 H 1.08993 * 109.47249 * 180.02562 * 4 2 1 36 36 H 1.08004 * 120.00162 * 0.02562 * 6 5 2 37 37 H 1.08003 * 119.99863 * 179.97438 * 7 6 5 38 38 H 1.08995 * 109.47308 * 329.99782 * 9 8 7 39 39 H 1.09001 * 109.46585 * 210.00338 * 9 8 7 40 40 H 1.07998 * 120.03312 * 0.25042 * 12 11 10 41 41 H 1.07998 * 119.97332 * 180.02562 * 17 15 13 42 42 H 1.09002 * 109.46920 * 225.00113 * 19 18 17 43 43 H 0.96696 * 114.00063 * 179.97438 * 20 19 18 44 44 H 1.08000 * 120.00427 * 179.72426 * 25 8 7 45 45 H 1.08003 * 119.99721 * 180.23553 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8782 -1.5211 5 6 2.4857 -0.8806 1.5252 6 6 2.7160 -2.2431 1.4910 7 6 3.1763 -2.8949 2.6199 8 6 3.4067 -2.1839 3.7827 9 6 3.9080 -2.8946 5.0136 10 8 5.3370 -2.8956 5.0142 11 6 5.9531 -3.5010 6.0637 12 6 5.1975 -4.0820 7.0709 13 6 5.8268 -4.6983 8.1381 14 9 5.0921 -5.2652 9.1199 15 6 7.2107 -4.7348 8.1991 16 17 7.9995 -5.5075 9.5386 17 6 7.9642 -4.1551 7.1942 18 6 7.3385 -3.5392 6.1276 19 6 8.1609 -2.9088 5.0334 20 8 8.1277 -3.7414 3.8725 21 14 9.9219 -2.7188 5.6111 22 1 10.7321 -2.0970 4.5331 23 1 9.9564 -1.8535 6.8175 24 1 10.4806 -4.0539 5.9434 25 6 3.1718 -0.8222 3.8184 26 6 2.7164 -0.1696 2.6880 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 3.5739 1.7565 -0.0005 31 1 2.1207 2.2703 -0.8900 32 1 2.1206 2.2703 0.8900 33 1 2.1206 -1.9059 -1.5211 34 1 2.1207 -0.3644 -2.4111 35 1 3.5739 -0.8786 -1.5209 36 1 2.5364 -2.7985 0.5823 37 1 3.3559 -3.9595 2.5932 38 1 3.5439 -3.9219 5.0136 39 1 3.5445 -2.3803 5.9033 40 1 4.1190 -4.0575 7.0202 41 1 9.0427 -4.1848 7.2430 42 1 7.7509 -1.9287 4.7895 43 1 8.6369 -3.3964 3.1263 44 1 3.3475 -0.2675 4.7283 45 1 2.5365 0.8950 2.7148 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_10548606_9276060.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:26:25 Heat of formation + Delta-G solvation = -112.945671 kcal Electronic energy + Delta-G solvation = -27794.070151 eV Core-core repulsion = 23647.568406 eV Total energy + Delta-G solvation = -4146.501744 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 368.092 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -50.05597 -41.63053 -40.13848 -38.73915 -37.79907 -37.10423 -33.27098 -32.69177 -31.93690 -30.97802 -29.61508 -28.48346 -28.45242 -27.53024 -26.66805 -24.11921 -23.53952 -22.85069 -22.00032 -19.79298 -18.63749 -18.52323 -17.58844 -17.45019 -17.23547 -17.11944 -16.70506 -16.27212 -15.94452 -15.59639 -15.42658 -15.34886 -14.80262 -14.41805 -14.36638 -14.25177 -14.18767 -14.15667 -13.97925 -13.87955 -13.76470 -13.40367 -13.31582 -13.30262 -13.19514 -13.14119 -12.95162 -12.66357 -12.40437 -12.20164 -12.03510 -11.89764 -11.83302 -11.62703 -11.08804 -10.94614 -10.88505 -10.34977 -10.18308 -9.83138 -9.75221 -9.30406 -0.25703 -0.11247 0.09749 0.49617 0.98599 1.06564 1.36984 1.43198 1.65440 1.80013 1.80638 1.83742 2.09158 2.14108 2.50010 2.86158 2.97081 3.23376 3.41450 3.64070 3.68043 3.70408 3.84516 3.98479 4.06638 4.14421 4.19324 4.27396 4.44866 4.47950 4.62261 4.63489 4.66376 4.67625 4.71643 4.71811 4.72482 4.72793 4.77319 4.87972 4.94274 5.09947 5.26140 5.34637 5.41720 5.46020 5.50037 5.55926 5.57499 6.04809 6.07961 6.58242 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 1.060 2.940 3 C -0.450 4.450 4 C -0.450 4.450 5 C -0.359 4.359 6 C -0.091 4.091 7 C -0.103 4.103 8 C -0.089 4.089 9 C 0.094 3.906 10 O -0.285 6.285 11 C 0.195 3.805 12 C -0.239 4.239 13 C 0.162 3.838 14 F -0.119 7.119 15 C -0.109 4.109 16 Cl -0.043 7.043 17 C -0.047 4.047 18 C -0.108 4.108 19 C -0.067 4.067 20 O -0.539 6.539 21 Si 0.933 3.067 22 H -0.249 1.249 23 H -0.244 1.244 24 H -0.244 1.244 25 C -0.106 4.106 26 C -0.092 4.092 27 H 0.069 0.931 28 H 0.071 0.929 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.072 0.928 32 H 0.069 0.931 33 H 0.069 0.931 34 H 0.072 0.928 35 H 0.071 0.929 36 H 0.124 0.876 37 H 0.122 0.878 38 H 0.076 0.924 39 H 0.076 0.924 40 H 0.154 0.846 41 H 0.150 0.850 42 H 0.081 0.919 43 H 0.380 0.620 44 H 0.121 0.879 45 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.113 3.353 -3.598 5.042 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.251 2.749 3 C -0.557 4.557 4 C -0.558 4.558 5 C -0.401 4.401 6 C -0.109 4.109 7 C -0.121 4.121 8 C -0.089 4.089 9 C 0.020 3.980 10 O -0.197 6.197 11 C 0.147 3.853 12 C -0.259 4.259 13 C 0.141 3.859 14 F -0.097 7.097 15 C -0.137 4.137 16 Cl -0.014 7.014 17 C -0.065 4.065 18 C -0.109 4.109 19 C -0.177 4.177 20 O -0.345 6.345 21 Si 0.754 3.246 22 H -0.173 1.173 23 H -0.167 1.167 24 H -0.167 1.167 25 C -0.124 4.124 26 C -0.110 4.110 27 H 0.088 0.912 28 H 0.090 0.910 29 H 0.088 0.912 30 H 0.090 0.910 31 H 0.091 0.909 32 H 0.088 0.912 33 H 0.088 0.912 34 H 0.091 0.909 35 H 0.090 0.910 36 H 0.142 0.858 37 H 0.140 0.860 38 H 0.094 0.906 39 H 0.094 0.906 40 H 0.171 0.829 41 H 0.167 0.833 42 H 0.099 0.901 43 H 0.228 0.772 44 H 0.139 0.861 45 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -0.507 3.058 -2.878 4.230 hybrid contribution -0.363 -0.152 0.192 0.438 sum -0.870 2.906 -2.686 4.052 Atomic orbital electron populations 1.26127 1.20432 1.04601 1.04525 0.78187 0.66856 0.66126 0.63693 1.26135 1.06489 1.18536 1.04588 1.26137 1.06504 1.08062 1.15064 1.27487 1.02857 0.99519 1.10226 1.21086 0.97446 0.94657 0.97737 1.21158 0.98440 0.99969 0.92512 1.19370 1.01171 0.94145 0.94248 1.21792 0.78248 1.00885 0.97098 1.86283 1.21178 1.71538 1.40739 1.18432 0.91012 0.89957 0.85851 1.21168 1.01744 1.07112 0.95860 1.17035 0.87124 0.95046 0.86677 1.91584 1.76607 1.81967 1.59553 1.20665 0.90990 1.07022 0.95042 1.98405 1.79754 1.79424 1.43854 1.20718 1.00589 0.93996 0.91210 1.18540 0.90625 1.04760 0.96950 1.24480 1.09067 0.96004 0.88161 1.86518 1.75971 1.48773 1.23243 0.85975 0.75315 0.81654 0.81641 1.17273 1.16696 1.16713 1.21141 0.98831 0.93489 0.98920 1.21078 0.97554 0.99763 0.92603 0.91171 0.90993 0.91156 0.91029 0.90924 0.91171 0.91156 0.90926 0.91017 0.85846 0.86039 0.90564 0.90606 0.82867 0.83277 0.90083 0.77217 0.86106 0.85867 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.88 8.65 101.05 0.87 1.75 16 2 Si 1.06 -3.19 12.32 -169.99 -2.09 -5.28 16 3 C -0.45 1.02 8.53 101.05 0.86 1.88 16 4 C -0.45 0.99 8.53 101.05 0.86 1.85 16 5 C -0.36 0.28 4.59 -39.59 -0.18 0.10 16 6 C -0.09 0.02 9.29 -39.58 -0.37 -0.35 16 7 C -0.10 -0.05 9.70 -39.58 -0.38 -0.43 16 8 C -0.09 -0.04 5.51 -104.62 -0.58 -0.62 16 9 C 0.09 -0.04 4.87 36.01 0.18 0.13 16 10 O -0.29 -0.43 9.45 -19.49 -0.18 -0.61 16 11 C 0.19 0.31 6.66 -39.23 -0.26 0.05 16 12 C -0.24 -0.23 9.01 -39.37 -0.35 -0.59 16 13 C 0.16 0.37 7.27 -39.41 -0.29 0.08 16 14 F -0.12 -0.37 16.83 2.25 0.04 -0.33 16 15 C -0.11 -0.26 6.33 -39.42 -0.25 -0.51 16 16 Cl -0.04 -0.11 28.61 -51.86 -1.48 -1.60 16 17 C -0.05 -0.07 8.44 -39.58 -0.33 -0.41 16 18 C -0.11 -0.17 5.31 -104.47 -0.55 -0.73 16 19 C -0.07 0.00 2.37 36.01 0.09 0.08 16 20 O -0.54 -0.32 12.86 -35.23 -0.45 -0.78 16 21 Si 0.93 -0.65 25.49 -169.99 -4.33 -4.98 16 22 H -0.25 0.17 7.11 56.52 0.40 0.57 16 23 H -0.24 0.05 7.11 56.52 0.40 0.45 16 24 H -0.24 -0.04 6.73 56.52 0.38 0.34 16 25 C -0.11 -0.02 9.70 -39.59 -0.38 -0.40 16 26 C -0.09 0.04 9.29 -39.58 -0.37 -0.33 16 27 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 28 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 29 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 30 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 31 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 32 H 0.07 -0.17 7.69 -51.93 -0.40 -0.57 16 33 H 0.07 -0.16 7.69 -51.93 -0.40 -0.56 16 34 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 35 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 36 H 0.12 -0.25 7.43 -52.48 -0.39 -0.64 16 37 H 0.12 -0.07 8.06 -52.48 -0.42 -0.49 16 38 H 0.08 -0.11 7.60 -51.93 -0.39 -0.51 16 39 H 0.08 -0.15 7.61 -51.93 -0.39 -0.54 16 40 H 0.15 -0.17 6.30 -52.49 -0.33 -0.50 16 41 H 0.15 0.04 4.88 -52.49 -0.26 -0.22 16 42 H 0.08 -0.07 7.83 -51.93 -0.41 -0.48 16 43 H 0.38 -1.40 8.74 45.56 0.40 -1.00 16 44 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 45 H 0.12 -0.28 7.43 -52.48 -0.39 -0.67 16 LS Contribution 395.59 15.07 5.96 5.96 Total: 0.00 -5.81 395.59 -9.51 -15.33 By element: Atomic # 1 Polarization: -3.76 SS G_CDS: -5.52 Total: -9.28 kcal Atomic # 6 Polarization: 3.02 SS G_CDS: -1.44 Total: 1.57 kcal Atomic # 8 Polarization: -0.75 SS G_CDS: -0.64 Total: -1.39 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.04 Total: -0.33 kcal Atomic # 14 Polarization: -3.84 SS G_CDS: -6.43 Total: -10.27 kcal Atomic # 17 Polarization: -0.11 SS G_CDS: -1.48 Total: -1.60 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -5.81 -9.51 -15.33 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10548606_9276060.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.620 kcal (2) G-P(sol) polarization free energy of solvation -5.813 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.433 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.512 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.325 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.946 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds