Wall clock time and date at job start Mon Mar 8 2021 12:16:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86306 * 109.46761 * 2 1 4 4 C 1.50698 * 109.47553 * 240.00064 * 2 1 3 5 5 C 1.38129 * 120.00737 * 104.97969 * 4 2 1 6 6 C 1.38247 * 120.08251 * 180.02562 * 5 4 2 7 7 C 1.38477 * 120.08432 * 359.73721 * 6 5 4 8 8 F 1.35099 * 119.99452 * 180.25739 * 7 6 5 9 9 C 1.38381 * 120.00471 * 0.51768 * 7 6 5 10 10 C 1.38676 * 119.91845 * 359.48441 * 9 7 6 11 11 O 1.35896 * 120.04107 * 180.23670 * 10 9 7 12 12 C 1.42901 * 116.99926 * 359.97438 * 11 10 9 13 13 C 1.53003 * 109.47143 * 180.02562 * 12 11 10 14 14 H 1.09002 * 112.84484 * 314.66642 * 13 12 11 15 15 C 1.53782 * 113.61622 * 85.85996 * 13 12 11 16 16 C 1.53962 * 87.01654 * 139.95688 * 15 13 12 17 17 H 1.08992 * 113.53597 * 89.19096 * 16 15 13 18 18 O 1.42896 * 113.73792 * 220.05838 * 16 15 13 19 19 C 1.53776 * 87.11013 * 334.63802 * 16 15 13 20 20 H 0.96704 * 113.99755 * 179.97438 * 1 2 3 21 21 H 1.09007 * 109.46841 * 119.99550 * 2 1 3 22 22 H 1.48504 * 109.99797 * 179.97438 * 3 2 1 23 23 H 1.48503 * 109.99915 * 301.31350 * 3 2 1 24 24 H 1.08004 * 119.95480 * 0.03618 * 5 4 2 25 25 H 1.08003 * 119.95754 * 180.02562 * 6 5 4 26 26 H 1.08002 * 120.04322 * 179.77012 * 9 7 6 27 27 H 1.09001 * 109.47271 * 299.99625 * 12 11 10 28 28 H 1.08994 * 109.47065 * 60.00462 * 12 11 10 29 29 H 1.08998 * 113.61410 * 254.53389 * 15 13 12 30 30 H 1.08996 * 113.60991 * 25.43494 * 15 13 12 31 31 H 0.96701 * 114.00499 * 277.59330 * 18 16 15 32 32 H 1.09003 * 113.62038 * 270.81144 * 19 16 15 33 33 H 1.08998 * 113.61682 * 139.91514 * 19 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.4532 0.0162 -2.2829 6 6 2.9141 -0.6338 -3.4126 7 6 2.8588 -2.0153 -3.4897 8 9 3.3145 -2.6490 -4.5924 9 6 2.3319 -2.7465 -2.4396 10 6 1.8695 -2.0946 -1.3063 11 8 1.3560 -2.8105 -0.2716 12 6 1.3225 -4.2314 -0.4192 13 6 0.7155 -4.8605 0.8365 14 1 1.1166 -4.4380 1.7577 15 6 -0.8205 -4.9316 0.8090 16 6 -0.6872 -6.3249 1.4504 17 1 -0.6710 -6.3027 2.5399 18 8 -1.6044 -7.2884 0.9285 19 6 0.7111 -6.3981 0.8147 20 1 -0.3933 -0.8834 -0.0004 21 1 1.7923 -0.5138 0.8901 22 1 3.5349 1.7703 0.0006 23 1 1.5354 2.4771 -1.1922 24 1 2.5013 1.0935 -2.2231 25 1 3.3221 -0.0637 -4.2342 26 1 2.2851 -3.8237 -2.5006 27 1 0.7151 -4.4925 -1.2858 28 1 2.3364 -4.6060 -0.5598 29 1 -1.3031 -4.1973 1.4540 30 1 -1.2386 -4.9523 -0.1974 31 1 -2.4857 -7.2474 1.3244 32 1 0.7125 -6.8206 -0.1901 33 1 1.4631 -6.8462 1.4642 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_10564890_11354858.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:16:34 Heat of formation + Delta-G solvation = -112.576522 kcal Electronic energy + Delta-G solvation = -18950.864538 eV Core-core repulsion = 15665.919164 eV Total energy + Delta-G solvation = -3284.945374 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.099 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -49.99595 -41.67611 -40.42741 -38.61180 -37.35983 -36.12503 -32.52104 -31.54981 -29.44293 -26.91708 -26.47858 -24.71842 -23.18019 -22.63057 -20.76825 -19.69127 -18.77497 -18.45257 -17.94725 -17.33952 -17.05871 -16.76400 -16.60739 -16.37793 -16.01910 -15.67894 -15.29472 -15.02753 -14.58858 -13.95604 -13.93224 -13.65117 -13.61966 -13.26188 -12.84446 -12.63907 -12.49398 -12.37681 -12.11178 -11.88280 -11.42685 -11.30407 -11.00395 -10.89258 -10.09835 -9.41361 -4.82506 -0.13234 0.07241 1.37253 1.65540 1.80677 1.95090 2.31885 3.03235 3.08593 3.26532 3.37188 3.46870 3.54389 3.61719 3.74520 3.81407 3.88924 3.94651 4.02011 4.04340 4.12673 4.24502 4.45977 4.47897 4.60038 4.61408 4.75744 4.80283 4.83682 4.94241 4.97102 5.08779 5.18343 5.48316 6.07948 6.58746 6.59099 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.072 4.072 3 Si 0.746 3.254 4 C -0.155 4.155 5 C -0.054 4.054 6 C -0.184 4.184 7 C 0.146 3.854 8 F -0.132 7.132 9 C -0.244 4.244 10 C 0.173 3.827 11 O -0.305 6.305 12 C 0.068 3.932 13 C -0.109 4.109 14 H 0.107 0.893 15 C -0.164 4.164 16 C 0.077 3.923 17 H 0.085 0.915 18 O -0.560 6.560 19 C -0.121 4.121 20 H 0.366 0.634 21 H 0.076 0.924 22 H -0.248 1.248 23 H -0.251 1.251 24 H 0.139 0.861 25 H 0.143 0.857 26 H 0.145 0.855 27 H 0.069 0.931 28 H 0.069 0.931 29 H 0.076 0.924 30 H 0.091 0.909 31 H 0.381 0.619 32 H 0.094 0.906 33 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.629 -0.154 3.825 3.879 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.180 4.180 3 Si 0.645 3.355 4 C -0.156 4.156 5 C -0.071 4.071 6 C -0.203 4.203 7 C 0.126 3.874 8 F -0.110 7.110 9 C -0.263 4.263 10 C 0.127 3.873 11 O -0.218 6.218 12 C -0.007 4.007 13 C -0.127 4.127 14 H 0.125 0.875 15 C -0.201 4.201 16 C 0.017 3.983 17 H 0.103 0.897 18 O -0.366 6.366 19 C -0.158 4.158 20 H 0.214 0.786 21 H 0.094 0.906 22 H -0.173 1.173 23 H -0.176 1.176 24 H 0.156 0.844 25 H 0.160 0.840 26 H 0.162 0.838 27 H 0.087 0.913 28 H 0.087 0.913 29 H 0.095 0.905 30 H 0.109 0.891 31 H 0.229 0.771 32 H 0.112 0.888 33 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 0.383 0.939 3.188 3.345 hybrid contribution -0.281 -1.863 -0.825 2.057 sum 0.102 -0.924 2.363 2.540 Atomic orbital electron populations 1.86717 1.16909 1.33266 1.97089 1.25164 0.84834 1.13250 0.94786 0.92992 0.78509 0.76385 0.87648 1.19775 1.06232 0.90734 0.98906 1.20720 0.95157 0.99677 0.91588 1.21053 1.06026 0.92569 1.00612 1.17386 0.96270 0.90401 0.83304 1.91546 1.86250 1.82341 1.50861 1.21214 1.08843 1.01471 0.94785 1.18423 0.92208 0.90348 0.86333 1.86059 1.77049 1.20217 1.38457 1.22945 1.01408 0.77420 0.98923 1.22333 0.96683 0.95597 0.98129 0.87482 1.23812 0.95412 0.98107 1.02801 1.23306 0.90239 0.87727 0.96982 0.89676 1.86523 1.25280 1.57868 1.66885 1.23068 0.95953 0.93883 1.02898 0.78641 0.90590 1.17283 1.17642 0.84373 0.83954 0.83778 0.91257 0.91291 0.90533 0.89052 0.77098 0.88790 0.90011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.84 12.65 -35.23 -0.45 -1.29 16 2 C -0.07 -0.06 2.33 36.00 0.08 0.02 16 3 Si 0.75 -0.22 30.40 -169.99 -5.17 -5.39 16 4 C -0.16 -0.30 5.28 -104.47 -0.55 -0.85 16 5 C -0.05 -0.10 8.65 -39.62 -0.34 -0.44 16 6 C -0.18 -0.31 10.02 -39.49 -0.40 -0.71 16 7 C 0.15 0.35 7.30 -39.44 -0.29 0.06 16 8 F -0.13 -0.42 17.27 2.25 0.04 -0.38 16 9 C -0.24 -0.36 9.02 -39.37 -0.35 -0.72 16 10 C 0.17 0.27 6.62 -39.22 -0.26 0.01 16 11 O -0.30 -0.11 9.04 -19.41 -0.18 -0.29 16 12 C 0.07 -0.10 4.57 37.16 0.17 0.07 16 13 C -0.11 0.23 4.00 -89.81 -0.36 -0.13 16 14 H 0.11 -0.25 8.14 -51.93 -0.42 -0.68 16 15 C -0.16 0.31 7.48 -25.82 -0.19 0.12 16 16 C 0.08 -0.12 5.21 -25.83 -0.13 -0.25 16 17 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 18 O -0.56 0.01 13.68 -35.23 -0.48 -0.47 16 19 C -0.12 0.21 7.47 -25.92 -0.19 0.01 16 20 H 0.37 -0.09 8.60 45.56 0.39 0.30 16 21 H 0.08 0.00 7.83 -51.93 -0.41 -0.41 16 22 H -0.25 -0.26 7.11 56.52 0.40 0.15 16 23 H -0.25 -0.47 6.81 56.52 0.38 -0.09 16 24 H 0.14 0.12 4.93 -52.48 -0.26 -0.14 16 25 H 0.14 -0.01 8.06 -52.48 -0.42 -0.43 16 26 H 0.14 -0.03 6.30 -52.49 -0.33 -0.36 16 27 H 0.07 -0.11 7.39 -51.93 -0.38 -0.50 16 28 H 0.07 -0.13 7.66 -51.93 -0.40 -0.53 16 29 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 30 H 0.09 -0.10 7.92 -51.93 -0.41 -0.51 16 31 H 0.38 -1.50 9.12 45.56 0.42 -1.08 16 32 H 0.09 -0.10 8.10 -51.93 -0.42 -0.52 16 33 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 LS Contribution 283.37 15.07 4.27 4.27 Total: 0.00 -5.12 283.37 -7.91 -13.03 By element: Atomic # 1 Polarization: -3.55 SS G_CDS: -3.13 Total: -6.68 kcal Atomic # 6 Polarization: 0.02 SS G_CDS: -2.82 Total: -2.80 kcal Atomic # 8 Polarization: -0.95 SS G_CDS: -1.10 Total: -2.05 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.04 Total: -0.38 kcal Atomic # 14 Polarization: -0.22 SS G_CDS: -5.17 Total: -5.39 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -5.12 -7.91 -13.03 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10564890_11354858.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.549 kcal (2) G-P(sol) polarization free energy of solvation -5.116 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.665 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.911 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.028 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.577 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds